EWM28570.1, cds2143 (CDS) Nannochloropsis gaditana

Overview
NameEWM28570.1
Unique Namecds2143
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1005330..1005387 -
Alignment locationCM002458.1:1005120..1005210 -
Alignment locationCM002458.1:1004476..1004998 -

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Properties
Property NameValue
Protein idEWM28570.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g8.613.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1005330..1005387 -
CM002458.1supercontigCM002458.1:1005120..1005210 -
CM002458.1supercontigCM002458.1:1004476..1004998 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM28570.1 vs. NCBI_GenBank
Match: gi|585110988|gb|EWM28570.1| (hypothetical protein Naga_100009g8 [Nannochloropsis gaditana])

HSP 1 Score: 454.521 bits (1168), Expect = 1.154e-161
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 
Query:    1 MPAALYYGDTQGWQMWRECALLIPMLSTALLVVAVFSRDWSRLTTHTTLWSEVLIDDFWGLWQWSSVMTSASSTVRLSFDYNWCNRDDTTDQCHLLVLARALAVATVALEVAAVLGMLIVECRTAYRAGFSAEYACMALTTSHLICAILMLVVWSSVQDELRAQDLTSGRSKIHFGFSWWFFLVSAVSTVMTNFCVIKELAHKSAYRSISPPGKTDLRSRNVR 223
            MPAALYYGDTQGWQMWRECALLIPMLSTALLVVAVFSRDWSRLTTHTTLWSEVLIDDFWGLWQWSSVMTSASSTVRLSFDYNWCNRDDTTDQCHLLVLARALAVATVALEVAAVLGMLIVECRTAYRAGFSAEYACMALTTSHLICAILMLVVWSSVQDELRAQDLTSGRSKIHFGFSWWFFLVSAVSTVMTNFCVIKELAHKSAYRSISPPGKTDLRSRNVR
Sbjct:    1 MPAALYYGDTQGWQMWRECALLIPMLSTALLVVAVFSRDWSRLTTHTTLWSEVLIDDFWGLWQWSSVMTSASSTVRLSFDYNWCNRDDTTDQCHLLVLARALAVATVALEVAAVLGMLIVECRTAYRAGFSAEYACMALTTSHLICAILMLVVWSSVQDELRAQDLTSGRSKIHFGFSWWFFLVSAVSTVMTNFCVIKELAHKSAYRSISPPGKTDLRSRNVR 223
The following BLAST results are available for this feature:
BLAST of EWM28570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110988|gb|EWM28570.1|1.154e-161100.00hypothetical protein Naga_100009g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2151rna2151Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications