EWM28550.1, cds2142 (CDS) Nannochloropsis gaditana

Overview
NameEWM28550.1
Unique Namecds2142
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1002177..1004087 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28550.1
ProductDor1-like protein
Orig transcript idgnl|cribi|Naga_100009g9.593.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1002177..1004087 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO:0017119Golgi transport complex
Vocabulary: INTERPRO
TermDefinition
IPR007255COG8
Homology
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|585110968|gb|EWM28550.1| (Dor1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1301.19 bits (3366), Expect = 0.000e+0
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0
Query:    1 MAAPSIASSLHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGGGGVGKMTREGRQIEELDTEMRKVWSAQSPEPC 636
            MAAPSIASSLHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGGGGVGKMTREGRQIEELDTEMRKVWSAQSPEPC
Sbjct:    1 MAAPSIASSLHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGGGGVGKMTREGRQIEELDTEMRKVWSAQSPEPC 636          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|553194995|ref|XP_005856070.1| (conserved oligomeric golgi complex subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422292990|gb|EKU20291.1| conserved oligomeric golgi complex subunit, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 370.933 bits (951), Expect = 5.084e-123
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:  336 LRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLV 513
            LRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLV
Sbjct:    1 LRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLV 178          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|298714915|emb|CBJ27671.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 270.011 bits (689), Expect = 1.134e-76
Identity = 197/551 (35.75%), Postives = 282/551 (51.18%), Query Frame = 0
Query:   10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRH--LRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGV--GVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAG--------GSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTS-----------TSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLV 537
            L  EP  L  EA  V + L  L   HY   I+N EC+  ++ +G E +  L +L  EV GL      F   A  +VG  KRNRQT +HH+QLVELLEVPQ+MDAC+R+ L +EA+ +  FA+TLERRH   R +  A   S     +  DE   G    VI  +V+E+R   R L+ERLV +LR PIQL  CLQ++SCLR+L+ LAL+ +++  ++RQ +L A  A V         D  G               R+       + G  G S  +   V   +  LM +IE+ R+ WFE+ TQFRAIFL   +E SG  S+T +  +++   + G G           +LS WLLRR++ F+ +L+  L  V +G +L  ++E+C+FF ASMGR+G DFR  L PVF + +   A A W+ +  E    L    R+   + A         +G +   + +    ST      G    H ++      +             +   P PP S++AFPP+A+  NLVL S+NQLR+C P S+   L   LV
Sbjct:   42 LQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMEGHLASLLTEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGDTAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILALEEKTEKKKQRQRAL-ARKADV---------DAKGSPLKNSNGGGGSGSKREVAAMGAAKIGGGGVSQRQLALVEMKLQALMDLIESCRSQWFEVATQFRAIFLS--VEGSGGGSATAARQSAVSSPRVGEGLTTGSGRDSGDILSLWLLRRVSAFVEQLKGLLPLVEDGGLLRSLLEECMFFGASMGRLGTDFRGLLVPVFEERVSGAAAAQWATASAEFVVTL----RDVAAIEA---------AGGNGASLLHVPDRSTITTSRGGPANGHGTSGAGAAAAAAEAERRAALYGGDGGIPPPPRSLMAFPPVARLLNLVLTSFNQLRECLPSSVEGRLADALV 567          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|553194989|ref|XP_005856068.1| (component of oligomeric golgi complex 8, partial [Nannochloropsis gaditana CCMP526] >gi|422292988|gb|EKU20289.1| component of oligomeric golgi complex 8, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 228.794 bits (582), Expect = 6.216e-69
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query:   53 GTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRG 162
            GTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRG
Sbjct:    1 GTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRG 110          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|1147603525|ref|XP_020105728.1| (conserved oligomeric Golgi complex subunit 8 [Ananas comosus])

HSP 1 Score: 207.608 bits (527), Expect = 2.695e-55
Identity = 166/611 (27.17%), Postives = 262/611 (42.88%), Query Frame = 0
Query:   10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVAD-LMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGG---------GGVGKM 610
            LHKEPELLR +A R+++ ++ +   +Y   I   E ++FI+ +  +F   L +L EE+  L   C  F   AQ I+ + K N+    +H  L++LLE+PQ+MD C+RNG YDEA+++ AF + L + H                             VI  L  ++R   + +   L+ +LR  IQLP CL+I++ LR                               RIG  +        E EL+ +FL  R+AWL   L+               V D L  M+  +R H F++  Q+RAIF +D    SGS              ++  GG  +L +W + +++  L  LE  L  +TEG  L+++++QC++ A  +G +G DFR  L P+F  A+  +   + S +    + +L+               HR       P P   +A         D             D S        PPS ++  PPLA F N   V+ N+LR C P SL   L   +V  L+ V+  LV++     +++R ++          +  +  L +   +V FPY   CFGR    G            GVG++
Sbjct:   56 LHKEPELLRVDAERIRRQMQEVAVENYGAFIAASESLSFIRNQLEDFDKHLESLIEEIPNLTSGCSEFLESAQQILEERKLNQTLLANHTTLLDLLEIPQLMDTCIRNGNYDEALDLEAFVSKLSKLH-------------------------SELPVIQALAADVRKTTQSMLSHLLQKLRSNIQLPECLRIVAHLR-------------------------------RIGVFN--------ESELRLQFLRCREAWLSGILDDLDQR---------NVYDYLKGMVNCHRMHLFDVVNQYRAIFNND---KSGSE-------------ENYDGG--LLFSWAMHQISNHLSTLEAMLPKITEGGSLSNILDQCMYCAMGLGLVGLDFRGLLPPLFENAVFNLFSKNMSTAVENFQVILDS--------------HRWV-----PMPSVGFATNGVIDESQD-------------DVS--------PPSVLMEHPPLAVFVNGFSVAMNELRPCAPVSLKHILAQEVVKGLQAVSDSLVQYNA--MRMLRGNE----------STLFLSLCQAFIEVAFPYCATCFGRCYPNGATLIIESRSLFNGVGRL 523          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|1150670226|ref|XP_020250466.1| (conserved oligomeric Golgi complex subunit 8 [Asparagus officinalis] >gi|1141973374|gb|ONK55079.1| uncharacterized protein A4U43_UnF7830 [Asparagus officinalis])

HSP 1 Score: 207.223 bits (526), Expect = 3.308e-55
Identity = 163/597 (27.30%), Postives = 261/597 (43.72%), Query Frame = 0
Query:   10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVAD-LMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYP-MCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGG 604
            LHKEPELLR +A R+++ ++ +   +Y   I   + ++F+QE+ T F   L +L  E+  L   C  F   AQ I+ + K N+    +H  L++LLEVPQ+MD C+RNG YDEA+++ AF + L + H                             VI  L  E+R   + L  +L+++LR  IQLP CL+I++ LR                               RIG           E E++ +FL  R+AWL   L+               V D L  M+ ++R H F+I  Q+RAIF +D    SGS              ++  GG  +L +W + ++   L  LE  L  +TEG  L+++++QC++ A  +G +G DFR  L P+F  A+L +   +   +    + +L+               HR       P P + +   G+   NQ D                        PPS ++  PP+A F N V  + N+LR C P SL + L   +V  L+ V+  L+++     +++R ++          +  +  L +   +V +PY   CFGR    G  
Sbjct:   47 LHKEPELLRVDAERIRRQMQEVAVGNYRAFIAASDALSFVQEQLTGFDKHLESLITEIPNLTTGCTEFLESAQQILEERKLNQTLLANHSTLLDLLEVPQLMDTCIRNGNYDEALDLEAFVSKLSKMH-------------------------PDLPVIQALAAEVRQTAQSLLSQLLHRLRTNIQLPECLRIVAHLR-------------------------------RIGVFS--------ESEMRLQFLRCREAWLSGILDDLDQR---------NVYDYLKGMVNSHRMHLFDIVNQYRAIFSND---KSGSE-------------ENSDGG--LLFSWAMHQIENHLTTLEVMLPKITEGGSLSNILDQCMYCAMGLGLVGLDFRGLLPPLFEDAVLNLFSKNLRTAVENFQVVLDS--------------HRWV-----PLPSVGFTTNGAIDENQDD----------------------VTPPSVLMEHPPIAVFVNGVSAAMNELRPCAPLSLKNILAQEVVKGLQAVSDSLIRYNA--IRVLRGNE----------STLFLSLCQAFIEVAYPYCANCFGRCYPNGAA 499          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|1035957154|gb|OAY78611.1| (Conserved oligomeric Golgi complex subunit 8 [Ananas comosus])

HSP 1 Score: 206.838 bits (525), Expect = 1.084e-54
Identity = 163/595 (27.39%), Postives = 257/595 (43.19%), Query Frame = 0
Query:   10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVAD-LMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGG 603
            LHKEPELLR +A R+++ ++ +   +Y   I   E ++FI+ +  +F   L +L EE+  L   C  F   AQ I+ + K N+    +H  L++LLE+PQ+MD C+RNG YDEA+++ AF + L + H                             VI  L  ++R   + +   L+ +LR  IQLP CL+I++ LR                               RIG  +        E EL+ +FL  R+AWL   L+               V D L  M+  +R H F++  Q+RAIF +D    SGS              ++  GG  +L +W + +++  L  LE  L  +TEG  L+++++QC++ A  +G +G DFR  L P+F  A+  +   + S +    + +L+               HR       P P   +A         D             D S        PPS ++  PPLA F N   V+ N+LR C P SL   L   +V  L+ V+  LV++     +++R ++          +  +  L +   +V FPY   CFGR    G 
Sbjct:   56 LHKEPELLRVDAERIRRQMQEVAVENYGAFIAASESLSFIRNQLEDFDKHLESLIEEIPNLTSGCSEFLESAQQILEERKLNQTLLANHTTLLDLLEIPQLMDTCIRNGNYDEALDLEAFVSKLSKLH-------------------------SELPVIQALAADVRKTTQSMLSHLLQKLRSNIQLPECLRIVAHLR-------------------------------RIGVFN--------ESELRLQFLRCREAWLSGILDDLDQR---------NVYDYLKGMVNCHRMHLFDVVNQYRAIFNND---KSGSE-------------ENYDGG--LLFSWAMHQISNHLSTLEAMLPKITEGGSLSNILDQCMYCAMGLGLVGLDFRGLLPPLFENAVFNLFSKNMSTAVENFQVILDS--------------HRWV-----PMPSVGFATNGVIDESQD-------------DVS--------PPSVLMEHPPLAVFVNGFSVAMNELRPCAPVSLKHILAQEVVKGLQAVSDSLVQYNA--MRMLRGNE----------STLFLSLCQAFIEVAFPYCATCFGRCYPNGA 507          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|301122787|ref|XP_002909120.1| (conserved oligomeric Golgi complex subunit 8, putative [Phytophthora infestans T30-4] >gi|262099882|gb|EEY57934.1| conserved oligomeric Golgi complex subunit 8, putative [Phytophthora infestans T30-4])

HSP 1 Score: 201.83 bits (512), Expect = 4.296e-53
Identity = 168/628 (26.75%), Postives = 272/628 (43.31%), Query Frame = 0
Query:   10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPN-QHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDL----QALLVTRLREVAGLLVKHEEQLQQLIREHD------EEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGGGGVGKMTREGRQIEELDTEMRK 626
            L KEP  L+ +A    + L  L   +Y   I++ +C   +++   E + + T ++E +  L+  C  F      +V      +  F+H+LQL ELLE+PQ++DAC+ N L+D A++V+ FAN   +                     DE       VVI  LV+E+  +   +RE+L+ +LR  +QL  C++I+  LR+LD L                           +G A    G  E EK+L+ EFL  R+ WL S      S              ++ +I+  RT WF++ TQ+ AIF        GS +        L R             W    +A F+  L  +L  + + + +A ++EQ LFF  S+GR+G DFRA L   F   +L +   +W ++  E +  L+  +   +   A  +          P  +  Y    +G N +   R TA+ S   D           +PP  +++FP LA+FTN +L S N+LR CT  SL + L    Q+ + T L  +A  + ++   L  L  E +          A  +A+T   R +    R  + PY+I+CF R+        +       ++IE  D  MR+
Sbjct:   13 LKKEPWRLQIQADNTAEQLRNLVLKNYHVFIQSNQCAAIVKDDLAELKEETTKVEEAIPELQLFCTEFQKEVADVVAKHGDIQFVFEHYLQLTELLEIPQLLDACIHNELFDSALDVIQFANETFQA--------------------DESAETSRNVVIDCLVREVAEMTGTMREKLLQKLREDLQLALCVRIVGYLRRLDAL---------------------------VGVA--AVGSLEYEKQLKEEFLTCRNVWLSSLSRGISSSDPYQY--------IIQVIDIKRTSWFDMITQYSAIF--------GSENVDGKVDPPLCR-------------WATATVANFIQILMKQLPKIDDFSSIATILEQSLFFGGSLGRVGVDFRAVLVVYFEDHVLNLMTEYWRSACREFQENLKAHSSVASSFSASSKT---------PIVIASYRSNGSGSNFRFVSRSTANASNGED----------YSPPRCLMSFPLLAEFTNALLSSLNELRLCTISSLQNRLGKKYQSAIGTMLLTIAEFIEENGLDLHALTGESNGGGTNTTSRNARAAALTDAVRAMNEVIRAELVPYLIKCFHRLFPVPSAAALSAANAVAKEIEGFDEIMRE 543          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|971505635|dbj|GAQ92571.1| (conserved oligomeric Golgi complex component-related [Klebsormidium nitens])

HSP 1 Score: 201.06 bits (510), Expect = 6.553e-53
Identity = 158/595 (26.55%), Postives = 255/595 (42.86%), Query Frame = 0
Query:   10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGG 604
            L+KEPELL+ +  RV++ ++ +  SHY   I   + +  I+   +     L +L  E+  L + C  F   AQ I+   K NR    +H +L++LLE+PQ+MD C+RNG YDEA+++ AF + L   H +                           VI  L +E+R     +  +L+ +LR  IQLP CL++I  LR+L   +                                       E +++ +FL  R+AWL   ++      S    +      +  + + +R H F++  Q+RAIF DD               TS    Q+ A    ++ +W + R+  +L  L+  L  +TEG+ L++V++ C++   S+GR+G DFR  L P+F   +  +   +   +  + + +L                HR       P P       S G ++ +G D                    APP S++  PPLA F N VL + N+LR C P +L   L ++L   LR+VA  L ++      L RE+++            +  L R   DV  PY + CFGR   GG G
Sbjct:   38 LNKEPELLKADGDRVKRQMQEVAVSHYRAFITAAQAVQSIRAELSAIDNHLGSLISELPRLTKGCNDFKEEAQQIIEKRKMNRTMQSNHTKLLDLLEIPQLMDTCVRNGNYDEALDLEAFVSKLATMHSK-------------------------LPVIQALAEEVRATTESMLSQLLQRLRSNIQLPECLRVIGYLRRLAVFS---------------------------------------EHDMRLQFLRCREAWLADIIDD--LDPSNPYDY------VKRLTDHHRVHLFDVVMQYRAIFADD---------------TS---NQEEAADGGLVYSWAMHRVTAYLTVLQHMLPRITEGSPLSNVLDHCMYCGMSLGRVGLDFRGLLPPLFEACVFGLFSRNIGLAVDQFQHVLNS--------------HRWV-----PLPAIKGGTRSAGGDE-NGEDV-------------------APPYSLMEHPPLAAFVNGVLAALNELRHCAPTALRSSLASVLQDGLRQVAEALQRYHATRIGL-RENEQTL----------FLALVRAFVDVAAPYCVLCFGRCYVGGAG 492          
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|658024194|ref|XP_008347502.1| (PREDICTED: conserved oligomeric Golgi complex subunit 8-like [Malus domestica])

HSP 1 Score: 200.675 bits (509), Expect = 7.283e-53
Identity = 167/596 (28.02%), Postives = 255/596 (42.79%), Query Frame = 0
Query:   10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQ--GRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGG 603
            LHKEPELLR +A R+Q+ ++ +  ++Y   I   + +  I+   +     L +L EE   L   C  F   A+ I+   K N+    +H  L++LLE+PQ+MD C+RNG YDEA+++ AFA  L   H +                           VI  L  E+R   + L  +L+ +LR  IQLP CL+II  LR                               RIG           E E++ +FL  R+AWL   LE    R+     +G          MI  +R H F++  Q+RAIF DD    SGS              ++  GG  +L +W +  +   L  L+  L  +TEG  L+++++QC++ A  +G +G DFR  L  +F +A+L +   + SA+    E +L+               HR       P P+  ++  S G    D                        PPS ++  PPLA F N V  + N LR C P SL   L   L+  L+ V+  L+++     ++++EH+          +G +  L R   +V FP+   CFGR   GG 
Sbjct:   40 LHKEPELLRVDAERIQRQMQEVAVANYRAFIAASDALVSIRNEVSSIDKHLASLLEETPXLMSGCTEFVESAEQILEKRKLNQTLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFACKLSTMHPK-------------------------LPVIQALAAEVRQTTQSLLSQLLQKLRSNIQLPECLRIIGYLR-------------------------------RIGVFS--------EYEMRLQFLRCREAWLTGILEDLDQRNAYEYLKG----------MINCHRMHLFDVVNQYRAIFADD---TSGSE-------------ENYDGG--LLFSWAMHIITSHLKTLKXLLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLXSLFEEAVLNLFSKNMSAAVENFEVVLDS--------------HRWV-----PLPVVGFSSNSHGDENQDDV---------------------TPPSYLMEHPPLAVFVNGVSAAMNDLRPCAPISLKHVLAQELIKGLQAVSDSLLRY--NTNRMLKEHE----------SGLFLSLCRAFIEVTFPHCATCFGRCYPGGA 491          
The following BLAST results are available for this feature:
BLAST of EWM28550.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110968|gb|EWM28550.1|0.000e+0100.00Dor1-like protein [Nannochloropsis gaditana][more]
gi|553194995|ref|XP_005856070.1|5.084e-123100.00conserved oligomeric golgi complex subunit, partia... [more]
gi|298714915|emb|CBJ27671.1|1.134e-7635.75conserved unknown protein [Ectocarpus siliculosus][more]
gi|553194989|ref|XP_005856068.1|6.216e-69100.00component of oligomeric golgi complex 8, partial [... [more]
gi|1147603525|ref|XP_020105728.1|2.695e-5527.17conserved oligomeric Golgi complex subunit 8 [Anan... [more]
gi|1150670226|ref|XP_020250466.1|3.308e-5527.30conserved oligomeric Golgi complex subunit 8 [Aspa... [more]
gi|1035957154|gb|OAY78611.1|1.084e-5427.39Conserved oligomeric Golgi complex subunit 8 [Anan... [more]
gi|301122787|ref|XP_002909120.1|4.296e-5326.75conserved oligomeric Golgi complex subunit 8, puta... [more]
gi|971505635|dbj|GAQ92571.1|6.553e-5326.55conserved oligomeric Golgi complex component-relat... [more]
gi|658024194|ref|XP_008347502.1|7.283e-5328.02PREDICTED: conserved oligomeric Golgi complex subu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2150rna2150Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications