EWM28550.1, cds2142 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|585110968|gb|EWM28550.1| (Dor1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1301.19 bits (3366), Expect = 0.000e+0 Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0
Query: 1 MAAPSIASSLHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGGGGVGKMTREGRQIEELDTEMRKVWSAQSPEPC 636
MAAPSIASSLHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGGGGVGKMTREGRQIEELDTEMRKVWSAQSPEPC
Sbjct: 1 MAAPSIASSLHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGGGGVGKMTREGRQIEELDTEMRKVWSAQSPEPC 636
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|553194995|ref|XP_005856070.1| (conserved oligomeric golgi complex subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422292990|gb|EKU20291.1| conserved oligomeric golgi complex subunit, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 370.933 bits (951), Expect = 5.084e-123 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 336 LRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLV 513
LRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLV
Sbjct: 1 LRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLV 178
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|298714915|emb|CBJ27671.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 270.011 bits (689), Expect = 1.134e-76 Identity = 197/551 (35.75%), Postives = 282/551 (51.18%), Query Frame = 0
Query: 10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRH--LRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGV--GVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAG--------GSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTS-----------TSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLV 537
L EP L EA V + L L HY I+N EC+ ++ +G E + L +L EV GL F A +VG KRNRQT +HH+QLVELLEVPQ+MDAC+R+ L +EA+ + FA+TLERRH R + A S + DE G VI +V+E+R R L+ERLV +LR PIQL CLQ++SCLR+L+ LAL+ +++ ++RQ +L A A V D G R+ + G G S + V + LM +IE+ R+ WFE+ TQFRAIFL +E SG S+T + +++ + G G +LS WLLRR++ F+ +L+ L V +G +L ++E+C+FF ASMGR+G DFR L PVF + + A A W+ + E L R+ + A +G + + + ST G H ++ + + P PP S++AFPP+A+ NLVL S+NQLR+C P S+ L LV
Sbjct: 42 LQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMEGHLASLLTEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGDTAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILALEEKTEKKKQRQRAL-ARKADV---------DAKGSPLKNSNGGGGSGSKREVAAMGAAKIGGGGVSQRQLALVEMKLQALMDLIESCRSQWFEVATQFRAIFLS--VEGSGGGSATAARQSAVSSPRVGEGLTTGSGRDSGDILSLWLLRRVSAFVEQLKGLLPLVEDGGLLRSLLEECMFFGASMGRLGTDFRGLLVPVFEERVSGAAAAQWATASAEFVVTL----RDVAAIEA---------AGGNGASLLHVPDRSTITTSRGGPANGHGTSGAGAAAAAAEAERRAALYGGDGGIPPPPRSLMAFPPVARLLNLVLTSFNQLRECLPSSVEGRLADALV 567
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|553194989|ref|XP_005856068.1| (component of oligomeric golgi complex 8, partial [Nannochloropsis gaditana CCMP526] >gi|422292988|gb|EKU20289.1| component of oligomeric golgi complex 8, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 228.794 bits (582), Expect = 6.216e-69 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 53 GTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRG 162
GTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRG
Sbjct: 1 GTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRG 110
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|1147603525|ref|XP_020105728.1| (conserved oligomeric Golgi complex subunit 8 [Ananas comosus]) HSP 1 Score: 207.608 bits (527), Expect = 2.695e-55 Identity = 166/611 (27.17%), Postives = 262/611 (42.88%), Query Frame = 0
Query: 10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVAD-LMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGG---------GGVGKM 610
LHKEPELLR +A R+++ ++ + +Y I E ++FI+ + +F L +L EE+ L C F AQ I+ + K N+ +H L++LLE+PQ+MD C+RNG YDEA+++ AF + L + H VI L ++R + + L+ +LR IQLP CL+I++ LR RIG + E EL+ +FL R+AWL L+ V D L M+ +R H F++ Q+RAIF +D SGS ++ GG +L +W + +++ L LE L +TEG L+++++QC++ A +G +G DFR L P+F A+ + + S + + +L+ HR P P +A D D S PPS ++ PPLA F N V+ N+LR C P SL L +V L+ V+ LV++ +++R ++ + + L + +V FPY CFGR G GVG++
Sbjct: 56 LHKEPELLRVDAERIRRQMQEVAVENYGAFIAASESLSFIRNQLEDFDKHLESLIEEIPNLTSGCSEFLESAQQILEERKLNQTLLANHTTLLDLLEIPQLMDTCIRNGNYDEALDLEAFVSKLSKLH-------------------------SELPVIQALAADVRKTTQSMLSHLLQKLRSNIQLPECLRIVAHLR-------------------------------RIGVFN--------ESELRLQFLRCREAWLSGILDDLDQR---------NVYDYLKGMVNCHRMHLFDVVNQYRAIFNND---KSGSE-------------ENYDGG--LLFSWAMHQISNHLSTLEAMLPKITEGGSLSNILDQCMYCAMGLGLVGLDFRGLLPPLFENAVFNLFSKNMSTAVENFQVILDS--------------HRWV-----PMPSVGFATNGVIDESQD-------------DVS--------PPSVLMEHPPLAVFVNGFSVAMNELRPCAPVSLKHILAQEVVKGLQAVSDSLVQYNA--MRMLRGNE----------STLFLSLCQAFIEVAFPYCATCFGRCYPNGATLIIESRSLFNGVGRL 523
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|1150670226|ref|XP_020250466.1| (conserved oligomeric Golgi complex subunit 8 [Asparagus officinalis] >gi|1141973374|gb|ONK55079.1| uncharacterized protein A4U43_UnF7830 [Asparagus officinalis]) HSP 1 Score: 207.223 bits (526), Expect = 3.308e-55 Identity = 163/597 (27.30%), Postives = 261/597 (43.72%), Query Frame = 0
Query: 10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVAD-LMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYP-MCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGG 604
LHKEPELLR +A R+++ ++ + +Y I + ++F+QE+ T F L +L E+ L C F AQ I+ + K N+ +H L++LLEVPQ+MD C+RNG YDEA+++ AF + L + H VI L E+R + L +L+++LR IQLP CL+I++ LR RIG E E++ +FL R+AWL L+ V D L M+ ++R H F+I Q+RAIF +D SGS ++ GG +L +W + ++ L LE L +TEG L+++++QC++ A +G +G DFR L P+F A+L + + + + +L+ HR P P + + G+ NQ D PPS ++ PP+A F N V + N+LR C P SL + L +V L+ V+ L+++ +++R ++ + + L + +V +PY CFGR G
Sbjct: 47 LHKEPELLRVDAERIRRQMQEVAVGNYRAFIAASDALSFVQEQLTGFDKHLESLITEIPNLTTGCTEFLESAQQILEERKLNQTLLANHSTLLDLLEVPQLMDTCIRNGNYDEALDLEAFVSKLSKMH-------------------------PDLPVIQALAAEVRQTAQSLLSQLLHRLRTNIQLPECLRIVAHLR-------------------------------RIGVFS--------ESEMRLQFLRCREAWLSGILDDLDQR---------NVYDYLKGMVNSHRMHLFDIVNQYRAIFSND---KSGSE-------------ENSDGG--LLFSWAMHQIENHLTTLEVMLPKITEGGSLSNILDQCMYCAMGLGLVGLDFRGLLPPLFEDAVLNLFSKNLRTAVENFQVVLDS--------------HRWV-----PLPSVGFTTNGAIDENQDD----------------------VTPPSVLMEHPPIAVFVNGVSAAMNELRPCAPLSLKNILAQEVVKGLQAVSDSLIRYNA--IRVLRGNE----------STLFLSLCQAFIEVAYPYCANCFGRCYPNGAA 499
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|1035957154|gb|OAY78611.1| (Conserved oligomeric Golgi complex subunit 8 [Ananas comosus]) HSP 1 Score: 206.838 bits (525), Expect = 1.084e-54 Identity = 163/595 (27.39%), Postives = 257/595 (43.19%), Query Frame = 0
Query: 10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVAD-LMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGG 603
LHKEPELLR +A R+++ ++ + +Y I E ++FI+ + +F L +L EE+ L C F AQ I+ + K N+ +H L++LLE+PQ+MD C+RNG YDEA+++ AF + L + H VI L ++R + + L+ +LR IQLP CL+I++ LR RIG + E EL+ +FL R+AWL L+ V D L M+ +R H F++ Q+RAIF +D SGS ++ GG +L +W + +++ L LE L +TEG L+++++QC++ A +G +G DFR L P+F A+ + + S + + +L+ HR P P +A D D S PPS ++ PPLA F N V+ N+LR C P SL L +V L+ V+ LV++ +++R ++ + + L + +V FPY CFGR G
Sbjct: 56 LHKEPELLRVDAERIRRQMQEVAVENYGAFIAASESLSFIRNQLEDFDKHLESLIEEIPNLTSGCSEFLESAQQILEERKLNQTLLANHTTLLDLLEIPQLMDTCIRNGNYDEALDLEAFVSKLSKLH-------------------------SELPVIQALAADVRKTTQSMLSHLLQKLRSNIQLPECLRIVAHLR-------------------------------RIGVFN--------ESELRLQFLRCREAWLSGILDDLDQR---------NVYDYLKGMVNCHRMHLFDVVNQYRAIFNND---KSGSE-------------ENYDGG--LLFSWAMHQISNHLSTLEAMLPKITEGGSLSNILDQCMYCAMGLGLVGLDFRGLLPPLFENAVFNLFSKNMSTAVENFQVILDS--------------HRWV-----PMPSVGFATNGVIDESQD-------------DVS--------PPSVLMEHPPLAVFVNGFSVAMNELRPCAPVSLKHILAQEVVKGLQAVSDSLVQYNA--MRMLRGNE----------STLFLSLCQAFIEVAFPYCATCFGRCYPNGA 507
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|301122787|ref|XP_002909120.1| (conserved oligomeric Golgi complex subunit 8, putative [Phytophthora infestans T30-4] >gi|262099882|gb|EEY57934.1| conserved oligomeric Golgi complex subunit 8, putative [Phytophthora infestans T30-4]) HSP 1 Score: 201.83 bits (512), Expect = 4.296e-53 Identity = 168/628 (26.75%), Postives = 272/628 (43.31%), Query Frame = 0
Query: 10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPN-QHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDL----QALLVTRLREVAGLLVKHEEQLQQLIREHD------EEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGGGGVGKMTREGRQIEELDTEMRK 626
L KEP L+ +A + L L +Y I++ +C +++ E + + T ++E + L+ C F +V + F+H+LQL ELLE+PQ++DAC+ N L+D A++V+ FAN + DE VVI LV+E+ + +RE+L+ +LR +QL C++I+ LR+LD L +G A G E EK+L+ EFL R+ WL S S ++ +I+ RT WF++ TQ+ AIF GS + L R W +A F+ L +L + + + +A ++EQ LFF S+GR+G DFRA L F +L + +W ++ E + L+ + + A + P + Y +G N + R TA+ S D +PP +++FP LA+FTN +L S N+LR CT SL + L Q+ + T L +A + ++ L L E + A +A+T R + R + PY+I+CF R+ + ++IE D MR+
Sbjct: 13 LKKEPWRLQIQADNTAEQLRNLVLKNYHVFIQSNQCAAIVKDDLAELKEETTKVEEAIPELQLFCTEFQKEVADVVAKHGDIQFVFEHYLQLTELLEIPQLLDACIHNELFDSALDVIQFANETFQA--------------------DESAETSRNVVIDCLVREVAEMTGTMREKLLQKLREDLQLALCVRIVGYLRRLDAL---------------------------VGVA--AVGSLEYEKQLKEEFLTCRNVWLSSLSRGISSSDPYQY--------IIQVIDIKRTSWFDMITQYSAIF--------GSENVDGKVDPPLCR-------------WATATVANFIQILMKQLPKIDDFSSIATILEQSLFFGGSLGRVGVDFRAVLVVYFEDHVLNLMTEYWRSACREFQENLKAHSSVASSFSASSKT---------PIVIASYRSNGSGSNFRFVSRSTANASNGED----------YSPPRCLMSFPLLAEFTNALLSSLNELRLCTISSLQNRLGKKYQSAIGTMLLTIAEFIEENGLDLHALTGESNGGGTNTTSRNARAAALTDAVRAMNEVIRAELVPYLIKCFHRLFPVPSAAALSAANAVAKEIEGFDEIMRE 543
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|971505635|dbj|GAQ92571.1| (conserved oligomeric Golgi complex component-related [Klebsormidium nitens]) HSP 1 Score: 201.06 bits (510), Expect = 6.553e-53 Identity = 158/595 (26.55%), Postives = 255/595 (42.86%), Query Frame = 0
Query: 10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQGRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGGG 604
L+KEPELL+ + RV++ ++ + SHY I + + I+ + L +L E+ L + C F AQ I+ K NR +H +L++LLE+PQ+MD C+RNG YDEA+++ AF + L H + VI L +E+R + +L+ +LR IQLP CL++I LR+L + E +++ +FL R+AWL ++ S + + + + +R H F++ Q+RAIF DD TS Q+ A ++ +W + R+ +L L+ L +TEG+ L++V++ C++ S+GR+G DFR L P+F + + + + + + +L HR P P S G ++ +G D APP S++ PPLA F N VL + N+LR C P +L L ++L LR+VA L ++ L RE+++ + L R DV PY + CFGR GG G
Sbjct: 38 LNKEPELLKADGDRVKRQMQEVAVSHYRAFITAAQAVQSIRAELSAIDNHLGSLISELPRLTKGCNDFKEEAQQIIEKRKMNRTMQSNHTKLLDLLEIPQLMDTCVRNGNYDEALDLEAFVSKLATMHSK-------------------------LPVIQALAEEVRATTESMLSQLLQRLRSNIQLPECLRVIGYLRRLAVFS---------------------------------------EHDMRLQFLRCREAWLADIIDD--LDPSNPYDY------VKRLTDHHRVHLFDVVMQYRAIFADD---------------TS---NQEEAADGGLVYSWAMHRVTAYLTVLQHMLPRITEGSPLSNVLDHCMYCGMSLGRVGLDFRGLLPPLFEACVFGLFSRNIGLAVDQFQHVLNS--------------HRWV-----PLPAIKGGTRSAGGDE-NGEDV-------------------APPYSLMEHPPLAAFVNGVLAALNELRHCAPTALRSSLASVLQDGLRQVAEALQRYHATRIGL-RENEQTL----------FLALVRAFVDVAAPYCVLCFGRCYVGGAG 492
BLAST of EWM28550.1 vs. NCBI_GenBank
Match: gi|658024194|ref|XP_008347502.1| (PREDICTED: conserved oligomeric Golgi complex subunit 8-like [Malus domestica]) HSP 1 Score: 200.675 bits (509), Expect = 7.283e-53 Identity = 167/596 (28.02%), Postives = 255/596 (42.79%), Query Frame = 0
Query: 10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQLVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHLRSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSAAPATVNRGRIGAAHDVSGHDELEKELQTEFLDARDAWLQSELEQ--GRSGASGARGHGVGVADLMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLLRGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQHDGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSLVDDLQALLVTRLREVAGLLVKHEEQLQQLIREHDEEAQAPLSAVTGQYRDLRREARDVVFPYVIRCFGRMVTGGG 603
LHKEPELLR +A R+Q+ ++ + ++Y I + + I+ + L +L EE L C F A+ I+ K N+ +H L++LLE+PQ+MD C+RNG YDEA+++ AFA L H + VI L E+R + L +L+ +LR IQLP CL+II LR RIG E E++ +FL R+AWL LE R+ +G MI +R H F++ Q+RAIF DD SGS ++ GG +L +W + + L L+ L +TEG L+++++QC++ A +G +G DFR L +F +A+L + + SA+ E +L+ HR P P+ ++ S G D PPS ++ PPLA F N V + N LR C P SL L L+ L+ V+ L+++ ++++EH+ +G + L R +V FP+ CFGR GG
Sbjct: 40 LHKEPELLRVDAERIQRQMQEVAVANYRAFIAASDALVSIRNEVSSIDKHLASLLEETPXLMSGCTEFVESAEQILEKRKLNQTLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFACKLSTMHPK-------------------------LPVIQALAAEVRQTTQSLLSQLLQKLRSNIQLPECLRIIGYLR-------------------------------RIGVFS--------EYEMRLQFLRCREAWLTGILEDLDQRNAYEYLKG----------MINCHRMHLFDVVNQYRAIFADD---TSGSE-------------ENYDGG--LLFSWAMHIITSHLKTLKXLLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLXSLFEEAVLNLFSKNMSAAVENFEVVLDS--------------HRWV-----PLPVVGFSSNSHGDENQDDV---------------------TPPSYLMEHPPLAVFVNGVSAAMNDLRPCAPISLKHVLAQELIKGLQAVSDSLLRY--NTNRMLKEHE----------SGLFLSLCRAFIEVTFPHCATCFGRCYPGGA 491 The following BLAST results are available for this feature:
BLAST of EWM28550.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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