EWM28606.1, cds2127 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|585111024|gb|EWM28606.1| (ppgpp synthetase [Nannochloropsis gaditana]) HSP 1 Score: 1729.53 bits (4478), Expect = 0.000e+0 Identity = 845/845 (100.00%), Postives = 845/845 (100.00%), Query Frame = 0
Query: 1 MTLCTDRPWGQPAELLGFPAPAGSPARLKLPDRQPSGNMVTNFKKKIRRSLQLLLLIPPLYRVNGWVSGSIQSLERHHHHAPRRRQPSANKVLSSPPTLHNIKAAVTPAPTDGSRNEYEDVRDDEDATELQKQITIELTDWVSEGEELWQEAFSTPRDEKRHRGKSEPGDNGMGHSTRPSNGLFTTVLGFRSAAHDDLSHGQAAHQLPVRLQREVNLVWYEIQRGDRMAYLRAEERDRVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTASYDDQGPKSPEGRDSSEEEGGSTEETAGALVPFGQGAAARRLEGLSMTEVLRTFLAQKEHVSEAGPEADNKSEEQVLADLDRVIETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLRGQLARKKNALPAWSTATTVALGDGASEGYGERGNVGGRNSDGTQRALGPAGATPVFSSPLPSASRLELEAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYKAELQTRDQVEDFQEQLGAARAATPAGEAAAKTETGKPALLLPASASSASWAVTVALPGEASSGG 845
MTLCTDRPWGQPAELLGFPAPAGSPARLKLPDRQPSGNMVTNFKKKIRRSLQLLLLIPPLYRVNGWVSGSIQSLERHHHHAPRRRQPSANKVLSSPPTLHNIKAAVTPAPTDGSRNEYEDVRDDEDATELQKQITIELTDWVSEGEELWQEAFSTPRDEKRHRGKSEPGDNGMGHSTRPSNGLFTTVLGFRSAAHDDLSHGQAAHQLPVRLQREVNLVWYEIQRGDRMAYLRAEERDRVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTASYDDQGPKSPEGRDSSEEEGGSTEETAGALVPFGQGAAARRLEGLSMTEVLRTFLAQKEHVSEAGPEADNKSEEQVLADLDRVIETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLRGQLARKKNALPAWSTATTVALGDGASEGYGERGNVGGRNSDGTQRALGPAGATPVFSSPLPSASRLELEAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYKAELQTRDQVEDFQEQLGAARAATPAGEAAAKTETGKPALLLPASASSASWAVTVALPGEASSGG
Sbjct: 1 MTLCTDRPWGQPAELLGFPAPAGSPARLKLPDRQPSGNMVTNFKKKIRRSLQLLLLIPPLYRVNGWVSGSIQSLERHHHHAPRRRQPSANKVLSSPPTLHNIKAAVTPAPTDGSRNEYEDVRDDEDATELQKQITIELTDWVSEGEELWQEAFSTPRDEKRHRGKSEPGDNGMGHSTRPSNGLFTTVLGFRSAAHDDLSHGQAAHQLPVRLQREVNLVWYEIQRGDRMAYLRAEERDRVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTASYDDQGPKSPEGRDSSEEEGGSTEETAGALVPFGQGAAARRLEGLSMTEVLRTFLAQKEHVSEAGPEADNKSEEQVLADLDRVIETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLRGQLARKKNALPAWSTATTVALGDGASEGYGERGNVGGRNSDGTQRALGPAGATPVFSSPLPSASRLELEAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYKAELQTRDQVEDFQEQLGAARAATPAGEAAAKTETGKPALLLPASASSASWAVTVALPGEASSGG 845
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|298713995|emb|CBJ27227.1| (GTP diphosphokinase [Ectocarpus siliculosus]) HSP 1 Score: 218.779 bits (556), Expect = 6.536e-56 Identity = 149/421 (35.39%), Postives = 225/421 (53.44%), Query Frame = 0
Query: 424 VVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLRGQLARKKNALPAWSTATTVALGDGASEGYGERGNVGGRNSDGTQ-RALGPAGATPVFSSPLPSASRLELEAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYKAELQTRDQVEDFQEQLGAARAATPAGEAAAKTETGKPALLLPASASSASWAVTVALPGEASS 843
V H++ R G F SP + + P +LDLD +A+L+R +LV+ + DARA VVHMA L LR+ + P H RH LALE+LQLYVPV++ALGLGS +E+EEL Y+ +FP++Y + A WH + + K ++ + A + + + Y + GR K++ V+R++K +++HD++G R+I+ P G R G R ++ A G +E E N G R G R GP A VF+ + ++ L H V+ V+ L+EEVPGR+KNYVD PK NGYRS+HT V + G E Q+RTA MH AE G ASH+LYK +L ++ F+ ++ + + +K+++G+ A L +A S A V+ G A++
Sbjct: 503 VSHRMHGRRARAGSAFTCSPP-QSFGVKP-----VLDLDDHHAKLMRDYLVHSSRDARAVVVHMADLTCRLRDPSKTPAHTRHTLALEALQLYVPVSNALGLGSSFRELEELGYKTIFPQTYSNMALWHHDVMGKSHDIVREVKTRMLDALHAR-EDIAIRVHSYRLEGRTKAL------VFRQNKRADDVHDIIGFRIIVAPKR-PGTRASSATGGAGRTRS-----------ATGGNTAE---EAENAGARKRPGDDRRRGGPRPARSVFTVKTFPPPYRDADSRLLHDVYEVLVGLFEEVPGRFKNYVDFPKKNGYRSVHTTV-VHPTGIKMEFQVRTALMHVAAEGGSASHSLYKGDLDNPEEASLFRSKMTPNILSPAHRQLQSKSKSGEAATALQPTADGGSPAANVSEKGPAAA 894 HSP 2 Score: 75.0998 bits (183), Expect = 3.946e-10 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 0
Query: 208 PVRLQREVNLVWYEIQRGDRMAYLRAEERDRVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTAS--YDDQGPKSPE 302
P R Q+ + +W + RG+++ YL E + +VKQ L VLA + L +HP Q ++ + F + D N DG++SF+EF+RWY+ S D++ + PE
Sbjct: 125 PFRFQQLIQQMWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQT-GVENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPE 220
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|551663923|ref|XP_005834725.1| (hypothetical protein GUITHDRAFT_41256, partial [Guillardia theta CCMP2712] >gi|428178872|gb|EKX47745.1| hypothetical protein GUITHDRAFT_41256, partial [Guillardia theta CCMP2712]) HSP 1 Score: 116.701 bits (291), Expect = 4.774e-25 Identity = 73/208 (35.10%), Postives = 114/208 (54.81%), Query Frame = 0
Query: 417 VRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVIL 624
VR + GPVV +V DS L L P+ LD ++ +R+++V + D RA +V +A L+ALR P++ +H+ ALESLQ++ P+A ALG+G L E+E+LS+RALFP+SY S W ++ + AK + + + L +E Y I R KSV S FKK++R +K E++ D+ +RV++
Sbjct: 21 VRDRFGPVVGSMVEDSVWLSQL----PDRVGL------------LDDDGSRFLREYMVAASRDHRAVIVMLADRLNALRKIEEAPLYDQHLKALESLQVFSPLAHALGVGKWLWELEDLSFRALFPDSYTSVEQWQLELWEVSSNMMEQAKVDVLKALNEN-DFLLEHVERYAITSRRKSVFSTFKKMFRSNKKLEDVKDVFAMRVVI 211 HSP 2 Score: 64.6994 bits (156), Expect = 1.501e-7 Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query: 722 WEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYK 781
WEE GR+K+YV PKPNGY+S+HT + E+QIRT MHA AE G ASH LYK
Sbjct: 242 WEEPRGRFKDYVTHPKPNGYQSIHTTLD-SPLKLPLEVQIRTEEMHAAAEFGDASHNLYK 300
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|302790548|ref|XP_002977041.1| (hypothetical protein SELMODRAFT_21858, partial [Selaginella moellendorffii] >gi|300155017|gb|EFJ21650.1| hypothetical protein SELMODRAFT_21858, partial [Selaginella moellendorffii]) HSP 1 Score: 118.242 bits (295), Expect = 2.337e-24 Identity = 66/174 (37.93%), Postives = 110/174 (63.22%), Query Frame = 0
Query: 460 DLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEAD--VQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTG 631
+LD NA ++R + + D RA VV +A L+ +R+ +P + + ALE++QLY P+A ALGLG+ +E+E++++R LFP+SY+ W ++ G+ + + K++ A +EAD +QG+ +E ++ GR KS S KK+ R + P++++D+LGLRVILFP G G
Sbjct: 119 NLDDENANMLRDFSLAYH-DIRAMVVELASRLNEMRHVDCLPRLRQQMAALENMQLYAPLAHALGLGTLSQELEDMAFRILFPDSYQCVEDWLQSHWGDGEAIIAESIKQLKAALEADSVLQGM---VESVKVTGRRKSRFSTMKKLLRDGRGPDQVYDILGLRVILFPKTGAG 288 HSP 2 Score: 90.1225 bits (222), Expect = 3.178e-15 Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0
Query: 711 CHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTA---EIQIRTAGMHAEAEDGIASHALYKAELQTRDQVEDFQE-QLGAARAA 803
C++ +V ++W+EVPGR K+Y+ PK NGY SLH V+L + G + E+QIRT+ MHA A G +SHALYK L QVE+F+ L AA+ A
Sbjct: 296 CYRAQKIVTNMWKEVPGRMKDYIAKPKLNGYSSLHLAVFLTKYGPWSLPMELQIRTSAMHAHAVAGGSSHALYKGGLTDPRQVENFKAVMLAAAKTA 392
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|302763085|ref|XP_002964964.1| (hypothetical protein SELMODRAFT_83164 [Selaginella moellendorffii] >gi|300167197|gb|EFJ33802.1| hypothetical protein SELMODRAFT_83164 [Selaginella moellendorffii]) HSP 1 Score: 118.242 bits (295), Expect = 7.194e-24 Identity = 82/263 (31.18%), Postives = 139/263 (52.85%), Query Frame = 0
Query: 371 LDRVIETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEAD--VQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTG 631
L R + L +L D E + + + A ++E L+ L V+ + G ++ DS R+ L + +LD NA ++R + + D RA VV +A L +R+ +P + + ALE++QLY P+A ALGLG+ +E+E++++R LFP+SY+ W ++ G+ + + K++ A +EAD +QG+ +E ++ GR KS S KK+ R + P++++D+LGLRVILFP G G
Sbjct: 178 LSRALAIAYTLADLHMDAEVIASGILRV-----AMETEVLS--LTDVQRELGAGAFHLLDDSLRVNQL----------------ACCLDNLDDENANMLRDFSLAYH-DIRAMVVELASRLDEMRHVDCLPRLRQQMAALENMQLYAPLAHALGLGTLSQELEDMAFRILFPDSYQCVEDWLQSHWGDGEAIIAESIKQLKAALEADSVLQGM---VESVKVTGRRKSRFSTMKKLLRDGRGPDQVYDILGLRVILFPKTGAG 413 HSP 2 Score: 90.1225 bits (222), Expect = 5.957e-15 Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0
Query: 711 CHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTA---EIQIRTAGMHAEAEDGIASHALYKAELQTRDQVEDFQE-QLGAARAA 803
C++ +V ++W+EVPGR K+Y+ PK NGY SLH V+L + G + E+QIRT+ MHA A G +SHALYK L QVE+F+ L AA+ A
Sbjct: 421 CYRAQKIVTNMWKEVPGRMKDYIAKPKLNGYSSLHLAVFLTKYGPWSLPMELQIRTSAMHAHAVAGGSSHALYKGGLTDPRQVENFKAVMLAAAKTA 517
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|763102389|ref|WP_043982777.1| (bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Meiothermus ruber]) HSP 1 Score: 118.242 bits (295), Expect = 1.358e-23 Identity = 81/264 (30.68%), Postives = 138/264 (52.27%), Query Frame = 0
Query: 375 IETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLR 638
+ Q+L EL DVET+LA GL + ED + + + G V +IV T++ L++ + ++ + + ++A+ +RQ + D R +V +A LH LR MP H + +A E+L++Y P+A LG+G E+E+LS+R L PESY++ K+ + A+ A++K+ + D L++ ++ +E+ GR K + S +KK+ R+ K E+++D+L LRVIL P G P LR
Sbjct: 69 VAVAQILAELGMDVETLLA-------GLLHDTIEDTQVRPEEIEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHA----------EEKHAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPESYQALERRLKSHRAEREAAVQAAREKLEQALARDFI-LKQSIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALRVILDPRQGQDPEETSLR 314 HSP 2 Score: 83.1889 bits (204), Expect = 1.044e-12 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 707 EAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYK------AELQTR----DQVEDFQEQLGAAR 801
E +C+ V +V +LW+ +PGR K+Y+ PKPNGY+SLHT V + G E+QIRT MH AE G+A+H LYK EL+ R ++D+Q++ ++R
Sbjct: 315 EKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAV-NGLPLEVQIRTREMHRVAEFGVAAHWLYKEGVTDPEELRRRVGWLKSIQDWQQEYSSSR 418
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|568062194|ref|WP_024050601.1| (bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Meiothermus ruber]) HSP 1 Score: 117.857 bits (294), Expect = 1.616e-23 Identity = 83/264 (31.44%), Postives = 139/264 (52.65%), Query Frame = 0
Query: 375 IETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLR 638
+ Q+L EL DVET+LA L L ED+E E + + G V +IV T++ L++ + ++ + + ++A+ +RQ + D R +V +A LH LR MP H + +A E+L++Y P+A LG+G E+E+LS+R L PE+Y++ K+ + A+ AK+K+ + D L++ ++ +E+ GR K + S +KK+ R+ K E+++D+L LRVIL P G P LR
Sbjct: 69 VAVAQILAELGLDVETLLAGL----LHDTIEDTEVRPED---IEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHA----------EEKHAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPENYQALERRLKSHRAEREAAVQAAKEKLEQALARDFI-LKQSIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALRVILDPRQGPDPEENSLR 314 HSP 2 Score: 82.0333 bits (201), Expect = 2.468e-12 Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 707 EAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYK------AELQTR----DQVEDFQEQLGAAR 801
E +C+ V +V +LW+ +PGR K+Y+ PKPNGY+SLHT V + G E+QIRT MH AE G+A+H LYK +L+ R ++D+Q++ ++R
Sbjct: 315 EKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAV-NGLPLEVQIRTREMHRVAEFGVAAHWLYKEGVTDPEDLRRRVGWLKSIQDWQQEYSSSR 418
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|916742791|ref|WP_051349847.1| (bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Meiothermus taiwanensis]) HSP 1 Score: 117.857 bits (294), Expect = 1.891e-23 Identity = 81/264 (30.68%), Postives = 138/264 (52.27%), Query Frame = 0
Query: 375 IETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLR 638
+ Q+L EL DVET+LA GL + ED + + + G V +IV T++ L++ + ++ + + ++A+ +RQ + D R +V +A LH LR MP H + +A E+L++Y P+A LG+G E+E+LS+R L PESY++ K+ + A+ A++K+ + D L++ ++ +E+ GR K + S +KK+ R+ K E+++D+L LRVIL P G P LR
Sbjct: 69 VAVAQILAELGMDVETLLA-------GLLHDTIEDTQVRPEEIEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHA----------EEKHAEDLRQMFIAIAEDVRIIIVKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPESYQALERRLKSHRAEREAAVQAAREKLEQALARDFI-LKQSIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALRVILDPRQGQDPEETSLR 314 HSP 2 Score: 83.1889 bits (204), Expect = 1.044e-12 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 707 EAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYK------AELQTR----DQVEDFQEQLGAAR 801
E +C+ V +V +LW+ +PGR K+Y+ PKPNGY+SLHT V + G E+QIRT MH AE G+A+H LYK EL+ R ++D+Q++ ++R
Sbjct: 315 EKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAV-NGLPLEVQIRTREMHRVAEFGVAAHWLYKEGVTDPEELRRRVGWLKSIQDWQQEYSSSR 418
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|756399682|gb|KIQ54470.1| (GTP pyrophosphokinase [Meiothermus ruber]) HSP 1 Score: 117.472 bits (293), Expect = 1.928e-23 Identity = 81/264 (30.68%), Postives = 138/264 (52.27%), Query Frame = 0
Query: 375 IETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLR 638
+ Q+L EL DVET+LA GL + ED + + + G V +IV T++ L++ + ++ + + ++A+ +RQ + D R +V +A LH LR MP H + +A E+L++Y P+A LG+G E+E+LS+R L PESY++ K+ + A+ A++K+ + D L++ ++ +E+ GR K + S +KK+ R+ K E+++D+L LRVIL P G P LR
Sbjct: 47 VAVAQILAELGMDVETLLA-------GLLHDTIEDTQVRPEEIEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHA----------EEKHAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPESYQALERRLKSHRAEREAAVQAAREKLEQALARDFI-LKQSIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALRVILDPRQGQDPEETSLR 292 HSP 2 Score: 83.1889 bits (204), Expect = 1.099e-12 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 707 EAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYK------AELQTR----DQVEDFQEQLGAAR 801
E +C+ V +V +LW+ +PGR K+Y+ PKPNGY+SLHT V + G E+QIRT MH AE G+A+H LYK EL+ R ++D+Q++ ++R
Sbjct: 293 EKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAV-NGLPLEVQIRTREMHRVAEFGVAAHWLYKEGVTDPEELRRRVGWLKSIQDWQQEYSSSR 396
BLAST of EWM28606.1 vs. NCBI_GenBank
Match: gi|888642486|dbj|GAO76464.1| ((p)ppGpp synthetase I SpoT/RelA [Meiothermus ruber H328]) HSP 1 Score: 117.087 bits (292), Expect = 2.640e-23 Identity = 83/264 (31.44%), Postives = 139/264 (52.65%), Query Frame = 0
Query: 375 IETTQVLLELEADVETVLAALATYFLGLDAEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLGTGPRGRFLR 638
+ Q+L EL DVET+LA L L ED+E E + + G V +IV T++ L++ + ++ + + ++A+ +RQ + D R +V +A LH LR MP H + +A E+L++Y P+A LG+G E+E+LS+R L PE+Y++ K+ + A+ AK+K+ + D L++ ++ +E+ GR K + S +KK+ R+ K E+++D+L LRVIL P G P LR
Sbjct: 47 VAVAQILAELGLDVETLLAGL----LHDTIEDTEVRPED---IEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHA----------EEKHAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPENYQALERRLKSHRAEREAAVQAAKEKLEQALARDFI-LKQSIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALRVILDPRQGPDPEENSLR 292 HSP 2 Score: 82.0333 bits (201), Expect = 2.668e-12 Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 0
Query: 697 PLPSASRLELEAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYK------AELQTR----DQVEDFQEQLGAAR 801
P P + L E +C+ V +V +LW+ +PGR K+Y+ PKPNGY+SLHT V + G E+QIRT MH AE G+A+H LYK +L+ R ++D+Q++ ++R
Sbjct: 284 PDPEENSLR-EKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAV-NGLPLEVQIRTREMHRVAEFGVAAHWLYKEGVTDPEDLRRRVGWLKSIQDWQQEYSSSR 396 The following BLAST results are available for this feature:
BLAST of EWM28606.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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