EWM28608.1, cds2122 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|585111026|gb|EWM28608.1| (hypothetical protein Naga_100009g31 [Nannochloropsis gaditana]) HSP 1 Score: 917.531 bits (2370), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0
Query: 1 MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGAHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK 441
MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGAHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK
Sbjct: 1 MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGAHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK 441
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|553194986|ref|XP_005856067.1| (hypothetical protein NGA_2017900, partial [Nannochloropsis gaditana CCMP526] >gi|422292987|gb|EKU20288.1| hypothetical protein NGA_2017900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 914.064 bits (2361), Expect = 0.000e+0 Identity = 438/441 (99.32%), Postives = 438/441 (99.32%), Query Frame = 0
Query: 1 MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGAHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK 441
MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHG HKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLL NVTRTESP FAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK
Sbjct: 40 MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGPHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK 480
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|1210518419|dbj|GAX22696.1| (hypothetical protein FisN_4Hh192 [Fistulifera solaris]) HSP 1 Score: 279.256 bits (713), Expect = 9.439e-87 Identity = 163/379 (43.01%), Postives = 226/379 (59.63%), Query Frame = 0
Query: 49 SDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLP-QLPRGADRWFLRKKPKPDSF--TVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGI-PE--FPPFLDVGEHIEDED 421
+DG P + + V TGGPCGGKTT+LAR+ + R GF T PEA TTL SNG+ + D + Q VL+ Q+ LEDG+ R+ ++ G+P V+LCDRGT+DG+ Y+ ++ + EL+ + ++ IR+ RYDAIFHL+TAA GAEPFY+L N RTE+ AREVD KTQ W GHP Y IDNSTDFEGK++R+ D +++VGLP L R + ++ L+ KP F + +++ +V K+YL ++ + N + + GSV Y T Q +DG E KRII RE+ S S T D SR V Q R SFL+ +Q+FVV H K G + + +A G PE PPFL+V ++D D
Sbjct: 12 TDGPP-IFRFVFTGGPCGGKTTALARVFSYLRERGFECITCPEAYTTLSSNGMNV-DFFSTQGMPKVIQRTVLEVQMALEDGIHRVLKARGKPGVMLCDRGTMDGSVYMPQKEFSELLSEMDTNIVQIRDNRYDAIFHLITAADGAEPFYTLENNKVRTETKEEAREVDQKTQNAWVGHPHFYFIDNSTDFEGKMSRLVDTLSKIVGLPSNLKRRSAKFLLKSKPDLSKFPSDIAYKEFEVEKIYLKHIHDDKSSYSFIRRRTNIDPDGRRLGSV-YQSTLAQWTEDGELIEQKRIISEREYMSTSAT-RDTSRHVVQQRRISFLYNKQSFVV---HIFQSPKEGLCILHAQVEASGKAEPEVDLPPFLEVDRRLQDTD 383
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|301118468|ref|XP_002906962.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262108311|gb|EEY66363.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 279.256 bits (713), Expect = 1.983e-86 Identity = 162/372 (43.55%), Postives = 215/372 (57.80%), Query Frame = 0
Query: 55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPE---FPPFLDVGEHIEDED 421
+ K VLTGGPC GKTTSL RLS FFR GFRV+ VPEA+T L + G D+ + + +Q +L QI LED +A+ G+P VILCDRG +DG+AY++ E WEEL + L+ +++R+ RY AIFHLVTAA GAE FYSL N R ES AR +D +T W GHP+ YV DNST FEGK+ R+ D AA L G+P R + ++ L K P +PF E +V KVYL P+ K S +Y++V RSQ G AY T+ + LD G LKR++ ARE+ DP+R + Q R FL+ Q+F IH + + + G L L QA + P FL+V + + D D
Sbjct: 38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQEKDILNFQWQ--ILSLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTLRDTRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDERTCHAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGVPTTVRASRKYLLAKTP----IEIPFHHEDFEVEKVYLK------PEAAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRCDPTRNVIKQQRMCFLYKNQSF-QIHVYKEPASVAG--LAVLHVQASCENDQDIVMPSFLNVEKELPDTD 394
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|675173235|ref|XP_008895502.1| (hypothetical protein PPTG_04911 [Phytophthora parasitica INRA-310] >gi|568105035|gb|ETN19680.1| hypothetical protein PPTG_04911 [Phytophthora parasitica INRA-310]) HSP 1 Score: 278.87 bits (712), Expect = 2.859e-86 Identity = 161/372 (43.28%), Postives = 215/372 (57.80%), Query Frame = 0
Query: 55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPE---FPPFLDVGEHIEDED 421
+ K VLTGGPC GKTTSL RLS FFR GFRV+ VPEA+T L + G D+ + + +Q +L+ QI LED +A+ G+P VILCDRG +DG+AY++ E WEEL + L+ +++R+ RY AIFHLVTAA GAE FYSL N R ES AR +D +T W GHP+ YV DNST FEGK+ R+ D AA L G+P R + ++ L K P +PF E +V KVYL P+ K S +Y++V RSQ G AY T+ + LD G LKR++ ARE+ DP+R + Q R FL+ Q+F IH + + G L L QA + P FL++ + + D D
Sbjct: 38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQEKDILNFQWQ--ILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTLRDTRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDKRTCHAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVRASRKYLLAKTP----IEIPFHHEDFEVEKVYLK------PEAAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRCDPTRNVIKQQRMCFLYKNQSF-QIHVYKEPADLAG--LAVLHVQASCENDQDIVMPSFLNIEKELPDTD 394
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|566015389|gb|ETI38300.1| (hypothetical protein F443_15899 [Phytophthora parasitica P1569] >gi|567952875|gb|ETK78538.1| hypothetical protein L915_15452 [Phytophthora parasitica] >gi|567981538|gb|ETL31976.1| hypothetical protein L916_15347 [Phytophthora parasitica] >gi|568011017|gb|ETL85195.1| hypothetical protein L917_15174 [Phytophthora parasitica] >gi|568040931|gb|ETM38359.1| hypothetical protein L914_15312 [Phytophthora parasitica] >gi|570319122|gb|ETO67070.1| hypothetical protein F444_15883 [Phytophthora parasitica P1976] >gi|570942969|gb|ETP08226.1| hypothetical protein F441_15734 [Phytophthora parasitica CJ01A1] >gi|570973750|gb|ETP36291.1| hypothetical protein F442_15743 [Phytophthora parasitica P10297]) HSP 1 Score: 278.87 bits (712), Expect = 2.985e-86 Identity = 161/372 (43.28%), Postives = 215/372 (57.80%), Query Frame = 0
Query: 55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPE---FPPFLDVGEHIEDED 421
+ K VLTGGPC GKTTSL RLS FFR GFRV+ VPEA+T L + G D+ + + +Q +L+ QI LED +A+ G+P VILCDRG +DG+AY++ E WEEL + L+ +++R+ RY AIFHLVTAA GAE FYSL N R ES AR +D +T W GHP+ YV DNST FEGK+ R+ D AA L G+P R + ++ L K P +PF E +V KVYL P+ K S +Y++V RSQ G AY T+ + LD G LKR++ ARE+ DP+R + Q R FL+ Q+F IH + + G L L QA + P FL++ + + D D
Sbjct: 38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQEKDILNFQWQ--ILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTLRDTRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDKRTCHAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVRASRKYLLAKTP----IEIPFHHEDFEVEKVYLK------PEAAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRCDPTRNVIKQQRMCFLYKNQSF-QIHVYKEPADLAG--LAVLHVQASCENDQDIVMPSFLNIEKELPDTD 394
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|1210521788|dbj|GAX19223.1| (hypothetical protein FisN_4Lh192 [Fistulifera solaris]) HSP 1 Score: 277.715 bits (709), Expect = 3.831e-86 Identity = 162/379 (42.74%), Postives = 226/379 (59.63%), Query Frame = 0
Query: 49 SDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLP-QLPRGADRWFLRKKPKPDSF--TVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGI-PE--FPPFLDVGEHIEDED 421
+DG P + + V TGGPCGGKTT+LAR+ + R GF T PEA TTL SNG+ + D + Q VL+ Q+ LEDG+ R+ ++ G+P V+LCDRGT+DG+ Y+ ++ + +L+ + ++ IR+ RYDAIFHL+TAA GAEPFY+L N RTE+ AREVD KTQ W GHP Y IDNSTDFEGK++R+ D +++VGLP L R + ++ L+ KP F + +++ +V K+YL ++ + N + + GSV Y T Q +DG E KRII RE+ S S T D SR V Q R SFL+ +Q+FVV H K G + + +A G PE PPFL+V ++D D
Sbjct: 12 TDGPP-IFRFVFTGGPCGGKTTALARVFSYLRERGFECITCPEAYTTLSSNGMNV-DFFSTQGMPKVIQRTVLEVQMALEDGIHRVLKARGKPGVMLCDRGTMDGSVYMPQKEFSDLLSEMDTHIVQIRDNRYDAIFHLITAADGAEPFYTLENNKVRTETKEEAREVDQKTQNAWVGHPHFYFIDNSTDFEGKMSRLVDTLSKIVGLPSNLKRRSAKFLLKSKPDLSKFPPEIAYKEFEVEKIYLKHIHDDKSSYSFIRRRTNIDPDGRRLGSV-YQSTLAQWTEDGELIEQKRIISEREYMSTSAT-RDTSRHVVQQRRISFLYNKQSFVV---HIFQSPKEGLCILHAQVEASGKAEPEVDLPPFLEVDRRLQDTD 383
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|695462909|ref|XP_009538576.1| (hypothetical protein PHYSODRAFT_348519 [Phytophthora sojae] >gi|348665887|gb|EGZ05715.1| hypothetical protein PHYSODRAFT_348519 [Phytophthora sojae]) HSP 1 Score: 277.33 bits (708), Expect = 1.046e-85 Identity = 161/372 (43.28%), Postives = 217/372 (58.33%), Query Frame = 0
Query: 55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPE---FPPFLDVGEHIEDED 421
+ K VLTGGPC GKTTSL RLS FFR GFRV+ VPEA+T L + G D+ + + +Q +L+ QI LED +A+ G+P VILCDRG +DG+AY++ E WEEL + L+ +++R+ RY AIFHLVTAA GAE FYSL N R ES ARE+D +T W GHP+ YV DNST FEGK+ R+ D AA L G+P + + ++ L K P +PF E +V KVYL P+ K S +Y++V RSQ G AY T+ + LD G LKR++ ARE+ +DP+R + Q R FL+ Q+F IH + + G L L QA + P FL++ + + D D
Sbjct: 38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLKEKDILNFQWQ--ILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLEHDLDTVTLRDTRYIAIFHLVTAAEGAEKFYSLENNGIRIESIEQAREIDARTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVKASRKYQLAKTP----IEIPFHHEDFEVEKVYLK------PESAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRSDPTRNVIKQQRMCFLYKNQSF-QIHVYKEPVELAG--LAVLHVQASCENDQDIVMPSFLNIEKELPDTD 394
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|953501919|emb|CEG36850.1| (isoform b [Plasmopara halstedii]) HSP 1 Score: 277.33 bits (708), Expect = 1.207e-85 Identity = 157/370 (42.43%), Postives = 213/370 (57.57%), Query Frame = 0
Query: 55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIP-EFPPFLDVGEHIEDED 421
+ K VLTGGPC GKTTSL RLS FFR GFRV+ VPEA+T L + G D+ + + +Q +L QI LED +A G+P VILCDRG +DG+AY++ E WE L + L+ +++R+ RY AIFHLVTAA GAE FYSL N R ES AR +D +T W GHP+ YV DNST FEGK+ R+ D AARL G+P + + ++ L K P +PF E +V KVYL P+ K S +Y++V RSQ G AY T+ + LD G LKR++ ARE+ +DP+R + Q R FL+ Q+F IH + + G + ++ K P FL++ + + D D
Sbjct: 35 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQEKDILNFQWQ--ILSLQISLEDSFHSLALDSGKPCVILCDRGVMDGSAYMTPEQWEILKLEHDLDTVTLRDTRYIAIFHLVTAAHGAEKFYSLENNGIRIESIEEARAIDKRTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAARLCGIPSTVKASRKYLLAKAP----VVIPFHHEDFEVEKVYLK------PEAAKSSNDYSFVRCRSQYGIPAYGMTTVRYLDTGDVVHLKRVLSAREYSFAIKHRSDPTRNVIKQQRMCFLYENQSF-QIHVYKEPADLVGLSILHVQASCKNDQDIVMPLFLNIEKELPDTD 391
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|298714777|emb|CBJ25676.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 277.33 bits (708), Expect = 1.331e-85 Identity = 167/417 (40.05%), Postives = 229/417 (54.92%), Query Frame = 0
Query: 49 SDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHG---------------------FRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRG------------------------ADRWFLRKKPKPDS-----FTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGS--VAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDV 413
+ P ++IVLTGGPC GKTT+ RL + FR G FRVFTVPEAAT++++NGV D LG ++ FQ ++L Q++LEDG ER AR+ G PS++LCDRG +DG+ Y+ E W+ LV+ G++ S+R+GRYD IFHLVTAA GAE YSL N R+ES AR+VD +T+GVW GHPRH V DNSTDFE K++R+ A+RLVGLP PR A++ FL K+ ++ TVP E + + +P VS E +++E+R + S Y+ T+ DG E+ R + A S ADP+R +V Q R SFLW +Q F + H+D + FG + L R+++GG P FL V
Sbjct: 12 TQAEPDHLEIVLTGGPCAGKTTAATRLRDTFRAKGTIHGEEDARIKRFVCGKISTRFRVFTVPEAATSMFTNGVGFQD-LGEKAKRFAFQWSILSLQMNLEDGFERFARACGEPSILLCDRGLMDGSVYMPPEEWDSLVEGNGMDERSLRDGRYDGIFHLVTAACGAEEHYSLENNQARSESVEMARDVDGRTEGVWLGHPRHVVFDNSTDFEAKMSRITSAASRLVGLPCRPRKLCKFLLFEPPPPLEEFPVPVREFHAEKVFLVKRDTAEAGESGLMTVPAETSGGDADGEGDANVDVPAAVCVSSE-SFLEKRGKTKSEVFVYSITTISTFSDGTVTEVTRHLSAARHASIEKERADPARPKVVQRRVSFLWERQVFEL---HTDMEPTFG--INVLHRRSEGGELSLPTFLKV 421 The following BLAST results are available for this feature:
BLAST of EWM28608.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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