EWM28608.1, cds2122 (CDS) Nannochloropsis gaditana

Overview
NameEWM28608.1
Unique Namecds2122
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:947394..948719 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28608.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g31.651.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:947394..948719 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Homology
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|585111026|gb|EWM28608.1| (hypothetical protein Naga_100009g31 [Nannochloropsis gaditana])

HSP 1 Score: 917.531 bits (2370), Expect = 0.000e+0
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0
Query:    1 MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGAHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK 441
            MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGAHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK
Sbjct:    1 MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGAHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK 441          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|553194986|ref|XP_005856067.1| (hypothetical protein NGA_2017900, partial [Nannochloropsis gaditana CCMP526] >gi|422292987|gb|EKU20288.1| hypothetical protein NGA_2017900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 914.064 bits (2361), Expect = 0.000e+0
Identity = 438/441 (99.32%), Postives = 438/441 (99.32%), Query Frame = 0
Query:    1 MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGAHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK 441
            MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHG HKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLL NVTRTESP FAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK
Sbjct:   40 MTSHLHDHTQSRNRVTNGDVNDKRLNQDGAGQESTEQAHHQQHGPHKDSDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPTKSNTTSMK 480          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|1210518419|dbj|GAX22696.1| (hypothetical protein FisN_4Hh192 [Fistulifera solaris])

HSP 1 Score: 279.256 bits (713), Expect = 9.439e-87
Identity = 163/379 (43.01%), Postives = 226/379 (59.63%), Query Frame = 0
Query:   49 SDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLP-QLPRGADRWFLRKKPKPDSF--TVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGI-PE--FPPFLDVGEHIEDED 421
            +DG P + + V TGGPCGGKTT+LAR+  + R  GF   T PEA TTL SNG+ + D   +       Q  VL+ Q+ LEDG+ R+ ++ G+P V+LCDRGT+DG+ Y+ ++ + EL+ +    ++ IR+ RYDAIFHL+TAA GAEPFY+L  N  RTE+   AREVD KTQ  W GHP  Y IDNSTDFEGK++R+ D  +++VGLP  L R + ++ L+ KP    F   + +++ +V K+YL ++         +    N   +  + GSV Y  T  Q  +DG   E KRII  RE+ S S T  D SR  V Q R SFL+ +Q+FVV   H     K G  +   + +A G   PE   PPFL+V   ++D D
Sbjct:   12 TDGPP-IFRFVFTGGPCGGKTTALARVFSYLRERGFECITCPEAYTTLSSNGMNV-DFFSTQGMPKVIQRTVLEVQMALEDGIHRVLKARGKPGVMLCDRGTMDGSVYMPQKEFSELLSEMDTNIVQIRDNRYDAIFHLITAADGAEPFYTLENNKVRTETKEEAREVDQKTQNAWVGHPHFYFIDNSTDFEGKMSRLVDTLSKIVGLPSNLKRRSAKFLLKSKPDLSKFPSDIAYKEFEVEKIYLKHIHDDKSSYSFIRRRTNIDPDGRRLGSV-YQSTLAQWTEDGELIEQKRIISEREYMSTSAT-RDTSRHVVQQRRISFLYNKQSFVV---HIFQSPKEGLCILHAQVEASGKAEPEVDLPPFLEVDRRLQDTD 383          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|301118468|ref|XP_002906962.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262108311|gb|EEY66363.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 279.256 bits (713), Expect = 1.983e-86
Identity = 162/372 (43.55%), Postives = 215/372 (57.80%), Query Frame = 0
Query:   55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPE---FPPFLDVGEHIEDED 421
            + K VLTGGPC GKTTSL RLS FFR  GFRV+ VPEA+T L + G    D+   +   + +Q  +L  QI LED    +A+  G+P VILCDRG +DG+AY++ E WEEL  +  L+ +++R+ RY AIFHLVTAA GAE FYSL  N  R ES   AR +D +T   W GHP+ YV DNST FEGK+ R+ D AA L G+P   R + ++ L K P      +PF  E  +V KVYL       P+  K S +Y++V  RSQ G  AY  T+ + LD G    LKR++ ARE+        DP+R  + Q R  FL+  Q+F  IH + +  +  G  L  L  QA     +    P FL+V + + D D
Sbjct:   38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQEKDILNFQWQ--ILSLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTLRDTRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDERTCHAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGVPTTVRASRKYLLAKTP----IEIPFHHEDFEVEKVYLK------PEAAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRCDPTRNVIKQQRMCFLYKNQSF-QIHVYKEPASVAG--LAVLHVQASCENDQDIVMPSFLNVEKELPDTD 394          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|675173235|ref|XP_008895502.1| (hypothetical protein PPTG_04911 [Phytophthora parasitica INRA-310] >gi|568105035|gb|ETN19680.1| hypothetical protein PPTG_04911 [Phytophthora parasitica INRA-310])

HSP 1 Score: 278.87 bits (712), Expect = 2.859e-86
Identity = 161/372 (43.28%), Postives = 215/372 (57.80%), Query Frame = 0
Query:   55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPE---FPPFLDVGEHIEDED 421
            + K VLTGGPC GKTTSL RLS FFR  GFRV+ VPEA+T L + G    D+   +   + +Q  +L+ QI LED    +A+  G+P VILCDRG +DG+AY++ E WEEL  +  L+ +++R+ RY AIFHLVTAA GAE FYSL  N  R ES   AR +D +T   W GHP+ YV DNST FEGK+ R+ D AA L G+P   R + ++ L K P      +PF  E  +V KVYL       P+  K S +Y++V  RSQ G  AY  T+ + LD G    LKR++ ARE+        DP+R  + Q R  FL+  Q+F  IH + +     G  L  L  QA     +    P FL++ + + D D
Sbjct:   38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQEKDILNFQWQ--ILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTLRDTRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDKRTCHAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVRASRKYLLAKTP----IEIPFHHEDFEVEKVYLK------PEAAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRCDPTRNVIKQQRMCFLYKNQSF-QIHVYKEPADLAG--LAVLHVQASCENDQDIVMPSFLNIEKELPDTD 394          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|566015389|gb|ETI38300.1| (hypothetical protein F443_15899 [Phytophthora parasitica P1569] >gi|567952875|gb|ETK78538.1| hypothetical protein L915_15452 [Phytophthora parasitica] >gi|567981538|gb|ETL31976.1| hypothetical protein L916_15347 [Phytophthora parasitica] >gi|568011017|gb|ETL85195.1| hypothetical protein L917_15174 [Phytophthora parasitica] >gi|568040931|gb|ETM38359.1| hypothetical protein L914_15312 [Phytophthora parasitica] >gi|570319122|gb|ETO67070.1| hypothetical protein F444_15883 [Phytophthora parasitica P1976] >gi|570942969|gb|ETP08226.1| hypothetical protein F441_15734 [Phytophthora parasitica CJ01A1] >gi|570973750|gb|ETP36291.1| hypothetical protein F442_15743 [Phytophthora parasitica P10297])

HSP 1 Score: 278.87 bits (712), Expect = 2.985e-86
Identity = 161/372 (43.28%), Postives = 215/372 (57.80%), Query Frame = 0
Query:   55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPE---FPPFLDVGEHIEDED 421
            + K VLTGGPC GKTTSL RLS FFR  GFRV+ VPEA+T L + G    D+   +   + +Q  +L+ QI LED    +A+  G+P VILCDRG +DG+AY++ E WEEL  +  L+ +++R+ RY AIFHLVTAA GAE FYSL  N  R ES   AR +D +T   W GHP+ YV DNST FEGK+ R+ D AA L G+P   R + ++ L K P      +PF  E  +V KVYL       P+  K S +Y++V  RSQ G  AY  T+ + LD G    LKR++ ARE+        DP+R  + Q R  FL+  Q+F  IH + +     G  L  L  QA     +    P FL++ + + D D
Sbjct:   38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQEKDILNFQWQ--ILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTLRDTRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDKRTCHAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVRASRKYLLAKTP----IEIPFHHEDFEVEKVYLK------PEAAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRCDPTRNVIKQQRMCFLYKNQSF-QIHVYKEPADLAG--LAVLHVQASCENDQDIVMPSFLNIEKELPDTD 394          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|1210521788|dbj|GAX19223.1| (hypothetical protein FisN_4Lh192 [Fistulifera solaris])

HSP 1 Score: 277.715 bits (709), Expect = 3.831e-86
Identity = 162/379 (42.74%), Postives = 226/379 (59.63%), Query Frame = 0
Query:   49 SDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLP-QLPRGADRWFLRKKPKPDSF--TVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGI-PE--FPPFLDVGEHIEDED 421
            +DG P + + V TGGPCGGKTT+LAR+  + R  GF   T PEA TTL SNG+ + D   +       Q  VL+ Q+ LEDG+ R+ ++ G+P V+LCDRGT+DG+ Y+ ++ + +L+ +    ++ IR+ RYDAIFHL+TAA GAEPFY+L  N  RTE+   AREVD KTQ  W GHP  Y IDNSTDFEGK++R+ D  +++VGLP  L R + ++ L+ KP    F   + +++ +V K+YL ++         +    N   +  + GSV Y  T  Q  +DG   E KRII  RE+ S S T  D SR  V Q R SFL+ +Q+FVV   H     K G  +   + +A G   PE   PPFL+V   ++D D
Sbjct:   12 TDGPP-IFRFVFTGGPCGGKTTALARVFSYLRERGFECITCPEAYTTLSSNGMNV-DFFSTQGMPKVIQRTVLEVQMALEDGIHRVLKARGKPGVMLCDRGTMDGSVYMPQKEFSDLLSEMDTHIVQIRDNRYDAIFHLITAADGAEPFYTLENNKVRTETKEEAREVDQKTQNAWVGHPHFYFIDNSTDFEGKMSRLVDTLSKIVGLPSNLKRRSAKFLLKSKPDLSKFPPEIAYKEFEVEKIYLKHIHDDKSSYSFIRRRTNIDPDGRRLGSV-YQSTLAQWTEDGELIEQKRIISEREYMSTSAT-RDTSRHVVQQRRISFLYNKQSFVV---HIFQSPKEGLCILHAQVEASGKAEPEVDLPPFLEVDRRLQDTD 383          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|695462909|ref|XP_009538576.1| (hypothetical protein PHYSODRAFT_348519 [Phytophthora sojae] >gi|348665887|gb|EGZ05715.1| hypothetical protein PHYSODRAFT_348519 [Phytophthora sojae])

HSP 1 Score: 277.33 bits (708), Expect = 1.046e-85
Identity = 161/372 (43.28%), Postives = 217/372 (58.33%), Query Frame = 0
Query:   55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPE---FPPFLDVGEHIEDED 421
            + K VLTGGPC GKTTSL RLS FFR  GFRV+ VPEA+T L + G    D+   +   + +Q  +L+ QI LED    +A+  G+P VILCDRG +DG+AY++ E WEEL  +  L+ +++R+ RY AIFHLVTAA GAE FYSL  N  R ES   ARE+D +T   W GHP+ YV DNST FEGK+ R+ D AA L G+P   + + ++ L K P      +PF  E  +V KVYL       P+  K S +Y++V  RSQ G  AY  T+ + LD G    LKR++ ARE+       +DP+R  + Q R  FL+  Q+F  IH + +     G  L  L  QA     +    P FL++ + + D D
Sbjct:   38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLKEKDILNFQWQ--ILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLEHDLDTVTLRDTRYIAIFHLVTAAEGAEKFYSLENNGIRIESIEQAREIDARTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVKASRKYQLAKTP----IEIPFHHEDFEVEKVYLK------PESAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRSDPTRNVIKQQRMCFLYKNQSF-QIHVYKEPVELAG--LAVLHVQASCENDQDIVMPSFLNIEKELPDTD 394          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|953501919|emb|CEG36850.1| (isoform b [Plasmopara halstedii])

HSP 1 Score: 277.33 bits (708), Expect = 1.207e-85
Identity = 157/370 (42.43%), Postives = 213/370 (57.57%), Query Frame = 0
Query:   55 LIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPF--EKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIP-EFPPFLDVGEHIEDED 421
            + K VLTGGPC GKTTSL RLS FFR  GFRV+ VPEA+T L + G    D+   +   + +Q  +L  QI LED    +A   G+P VILCDRG +DG+AY++ E WE L  +  L+ +++R+ RY AIFHLVTAA GAE FYSL  N  R ES   AR +D +T   W GHP+ YV DNST FEGK+ R+ D AARL G+P   + + ++ L K P      +PF  E  +V KVYL       P+  K S +Y++V  RSQ G  AY  T+ + LD G    LKR++ ARE+       +DP+R  + Q R  FL+  Q+F  IH + +     G  +  ++   K       P FL++ + + D D
Sbjct:   35 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQEKDILNFQWQ--ILSLQISLEDSFHSLALDSGKPCVILCDRGVMDGSAYMTPEQWEILKLEHDLDTVTLRDTRYIAIFHLVTAAHGAEKFYSLENNGIRIESIEEARAIDKRTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAARLCGIPSTVKASRKYLLAKAP----VVIPFHHEDFEVEKVYLK------PEAAKSSNDYSFVRCRSQYGIPAYGMTTVRYLDTGDVVHLKRVLSAREYSFAIKHRSDPTRNVIKQQRMCFLYENQSF-QIHVYKEPADLVGLSILHVQASCKNDQDIVMPLFLNIEKELPDTD 391          
BLAST of EWM28608.1 vs. NCBI_GenBank
Match: gi|298714777|emb|CBJ25676.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 277.33 bits (708), Expect = 1.331e-85
Identity = 167/417 (40.05%), Postives = 229/417 (54.92%), Query Frame = 0
Query:   49 SDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHG---------------------FRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRG------------------------ADRWFLRKKPKPDS-----FTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGS--VAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDV 413
            +   P  ++IVLTGGPC GKTT+  RL + FR  G                     FRVFTVPEAAT++++NGV   D LG    ++ FQ ++L  Q++LEDG ER AR+ G PS++LCDRG +DG+ Y+  E W+ LV+  G++  S+R+GRYD IFHLVTAA GAE  YSL  N  R+ES   AR+VD +T+GVW GHPRH V DNSTDFE K++R+   A+RLVGLP  PR                         A++ FL K+   ++      TVP E +        +    +P    VS E +++E+R +  S    Y+ T+     DG   E+ R + A    S     ADP+R +V Q R SFLW +Q F +   H+D +  FG  +  L R+++GG    P FL V
Sbjct:   12 TQAEPDHLEIVLTGGPCAGKTTAATRLRDTFRAKGTIHGEEDARIKRFVCGKISTRFRVFTVPEAATSMFTNGVGFQD-LGEKAKRFAFQWSILSLQMNLEDGFERFARACGEPSILLCDRGLMDGSVYMPPEEWDSLVEGNGMDERSLRDGRYDGIFHLVTAACGAEEHYSLENNQARSESVEMARDVDGRTEGVWLGHPRHVVFDNSTDFEAKMSRITSAASRLVGLPCRPRKLCKFLLFEPPPPLEEFPVPVREFHAEKVFLVKRDTAEAGESGLMTVPAETSGGDADGEGDANVDVPAAVCVSSE-SFLEKRGKTKSEVFVYSITTISTFSDGTVTEVTRHLSAARHASIEKERADPARPKVVQRRVSFLWERQVFEL---HTDMEPTFG--INVLHRRSEGGELSLPTFLKV 421          
The following BLAST results are available for this feature:
BLAST of EWM28608.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111026|gb|EWM28608.1|0.000e+0100.00hypothetical protein Naga_100009g31 [Nannochlorops... [more]
gi|553194986|ref|XP_005856067.1|0.000e+099.32hypothetical protein NGA_2017900, partial [Nannoch... [more]
gi|1210518419|dbj|GAX22696.1|9.439e-8743.01hypothetical protein FisN_4Hh192 [Fistulifera sola... [more]
gi|301118468|ref|XP_002906962.1|1.983e-8643.55conserved hypothetical protein [Phytophthora infes... [more]
gi|675173235|ref|XP_008895502.1|2.859e-8643.28hypothetical protein PPTG_04911 [Phytophthora para... [more]
gi|566015389|gb|ETI38300.1|2.985e-8643.28hypothetical protein F443_15899 [Phytophthora para... [more]
gi|1210521788|dbj|GAX19223.1|3.831e-8642.74hypothetical protein FisN_4Lh192 [Fistulifera sola... [more]
gi|695462909|ref|XP_009538576.1|1.046e-8543.28hypothetical protein PHYSODRAFT_348519 [Phytophtho... [more]
gi|953501919|emb|CEG36850.1|1.207e-8542.43isoform b [Plasmopara halstedii][more]
gi|298714777|emb|CBJ25676.1|1.331e-8540.05conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2130rna2130Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications