EWM30497.1, cds212 (CDS) Nannochloropsis gaditana

Overview
NameEWM30497.1
Unique Namecds212
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:541395..541643 -
Alignment locationCM002455.1:540812..541249 -

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Properties
Property NameValue
Protein idEWM30497.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100013g3.9785.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:541395..541643 -
CM002455.1supercontigCM002455.1:540812..541249 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM30497.1 vs. NCBI_GenBank
Match: gi|585113161|gb|EWM30497.1| (hypothetical protein Naga_100013g3 [Nannochloropsis gaditana])

HSP 1 Score: 472.626 bits (1215), Expect = 1.024e-168
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query:    1 MMALVQKVCIVLLAVHTAHAFLLPRASLPPSTTALEQQVLRATGTSSTPQFNLRYGEPPPQEGEAERLNRQKRWEAEYLAYVKRNGAHLCAMSWRGYQAEGRGAILAKYEDKDMDQEGRTLSEIDRVSGVPSMYVSLARWMESGQAAKDGPAQAERQDLQQILDRVISYEPERAFVVVFQAHGLMGADIVTPNVSPPDMAEKLMAKESDLAPQTIDVDGHEVLVDQGN 228
            MMALVQKVCIVLLAVHTAHAFLLPRASLPPSTTALEQQVLRATGTSSTPQFNLRYGEPPPQEGEAERLNRQKRWEAEYLAYVKRNGAHLCAMSWRGYQAEGRGAILAKYEDKDMDQEGRTLSEIDRVSGVPSMYVSLARWMESGQAAKDGPAQAERQDLQQILDRVISYEPERAFVVVFQAHGLMGADIVTPNVSPPDMAEKLMAKESDLAPQTIDVDGHEVLVDQGN
Sbjct:    1 MMALVQKVCIVLLAVHTAHAFLLPRASLPPSTTALEQQVLRATGTSSTPQFNLRYGEPPPQEGEAERLNRQKRWEAEYLAYVKRNGAHLCAMSWRGYQAEGRGAILAKYEDKDMDQEGRTLSEIDRVSGVPSMYVSLARWMESGQAAKDGPAQAERQDLQQILDRVISYEPERAFVVVFQAHGLMGADIVTPNVSPPDMAEKLMAKESDLAPQTIDVDGHEVLVDQGN 228          
BLAST of EWM30497.1 vs. NCBI_GenBank
Match: gi|299116277|emb|CBN76085.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 149.058 bits (375), Expect = 2.078e-40
Identity = 98/232 (42.24%), Postives = 124/232 (53.45%), Query Frame = 0
Query:    3 ALVQKVCIVLLAVHTAHAFLLP--RASLPPSTTALEQQVLRATGTSSTPQFNLRYGEPPPQEGE------------AERLNRQKRWEAEYLAYVKRNGAHLCAMSWRGYQAEGRGAILAKYEDKDMDQEGRTLSEIDRVSGVPSMYVSLARWMESGQAAKDGPAQAERQDLQQILDRVISYEPERAFVVVFQAHGLMGADIVTPNVSPPDMAEKLMAKES-DLAPQTIDVDG 219
            A++   C  L A   A AFLLP  RA L    TA   +V+ A G      F      P P                +E L+    WE EY AY+KR G +LC+MSW G+Q  GRGAI A Y+D   + +   L+E D+  G+PSMYV L  + ES +AA  G    E  DL QI+ RV  Y PER FVVVFQA G+MGADIV PNVSPP+MA+ ++  +     P    +DG
Sbjct:   67 AVIAYCC--LSAPFLAEAFLLPPARAGLAQRETAATARVMAAKG------FGKSVEPPSPAPATTGGEEGGGKAPGSEGLSGVGSWEKEYKAYIKRTGQYLCSMSWEGHQEMGRGAIFANYDDARKEDK---LNETDKFGGIPSMYVPLTEF-ESMKAA--GQEAGEEDDLGQIVRRVKDYRPEREFVVVFQAAGVMGADIVRPNVSPPEMAKHVVKSDGVSTMPSDTGLDG 284          
BLAST of EWM30497.1 vs. NCBI_GenBank
Match: gi|873235732|emb|CEL99908.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 95.9005 bits (237), Expect = 1.297e-20
Identity = 66/207 (31.88%), Postives = 105/207 (50.72%), Query Frame = 0
Query:   16 HTAHAFLLPRASLPPSTT-ALEQQVLRATG------TSSTPQFNLRYGEPPPQEGEAERLNRQKRWEAEYLAYVKRNGAHLCAMSWRGYQAEGRGAILAKYEDKDMDQE-----GRTLSEIDRVSGVPSMYVSLARWMESGQAAKDGPAQAERQDLQQILDRVISYEPERAFVVVFQAHGLMGADIVTPNVSPPDMAEKLMAKESDL 210
            H+A AF+ P A L P    +     LRA G      T   P+F   YG       +   + +Q+ WE  Y   V+ +G   CA +W GY+  GRGA++  +E K   +        T ++  ++   P+MY    ++      +K   ++ E   L Q+  R+ SY+P + FVVVFQ+ GLMGADIV PN++P + A ++  +E++L
Sbjct:   39 HSAGAFI-PVADLSPRRRFSRHGSSLRAAGEGFGPKTERRPRFQFSYGG-----SQLTPMEQQQLWEKSYQENVRASGFSWCAQAWMGYEKMGRGAVMVYHELKQEGEGEGGDGAATATKATKMDVAPTMYAPAEKF------SKKAGSREEESHLAQVRRRLDSYDPHKEFVVVFQSSGLMGADIVKPNMAPAEAA-RIYKEENNL 232          
The following BLAST results are available for this feature:
BLAST of EWM30497.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585113161|gb|EWM30497.1|1.024e-168100.00hypothetical protein Naga_100013g3 [Nannochloropsi... [more]
gi|299116277|emb|CBN76085.1|2.078e-4042.24expressed unknown protein [Ectocarpus siliculosus][more]
gi|873235732|emb|CEL99908.1|1.297e-2031.88unnamed protein product [Vitrella brassicaformis C... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna212rna212Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications