EWM28572.1, cds2119 (CDS) Nannochloropsis gaditana

Overview
NameEWM28572.1
Unique Namecds2119
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:941672..943612 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28572.1
Producteukaryotic translation initiation factor 2a
Orig transcript idgnl|cribi|Naga_100009g34.615.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:941672..943612 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
IPR0110426-blade_b-propeller_TolB-like
IPR013979TIF_beta_prop-like
Homology
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|585110990|gb|EWM28572.1| (eukaryotic translation initiation factor 2a [Nannochloropsis gaditana])

HSP 1 Score: 1319.68 bits (3414), Expect = 0.000e+0
Identity = 646/646 (100.00%), Postives = 646/646 (100.00%), Query Frame = 0
Query:    1 MTAPPQAVKILLRSKAGVHLQELTTGENGLPVLTPAPDEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPHFGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPKTAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGGNSAYGAPGQPYIPGLAPAGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQAAAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKLEV 646
            MTAPPQAVKILLRSKAGVHLQELTTGENGLPVLTPAPDEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPHFGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPKTAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGGNSAYGAPGQPYIPGLAPAGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQAAAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKLEV
Sbjct:    1 MTAPPQAVKILLRSKAGVHLQELTTGENGLPVLTPAPDEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPHFGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPKTAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGGNSAYGAPGQPYIPGLAPAGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQAAAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKLEV 646          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|325182679|emb|CCA17134.1| (eukaryotic translation initiation factor 2A putative [Albugo laibachii Nc14])

HSP 1 Score: 449.899 bits (1156), Expect = 1.578e-147
Identity = 278/660 (42.12%), Postives = 382/660 (57.88%), Query Frame = 0
Query:    3 APPQAVKILLRSKAGVH-LQELTTGENGLPVLTPAPDEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMA-----SLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPH-FGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPKTAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGG-NSAYGAPGQ--PYIPGLAPAGATTNGESKNTARNKARKEKKKAA------EQALRAQAEAEAERIRKEQAAAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKLEV 646
            APP  +K  LR K GV  +   ++ +       P  DE  GKP   D  EF  DGS V +V +   K   +   ET  V   V    IQA+++SP G +LLTWER                Q  S A             NLL+W + NG ++  F Q+ + +  WP ++W+ DE +C R TA  V +Y G +        F+ S G +      S  +SP   P +RVA F PE KGKPASV+I++YP+    A+A+KSF+KAQE  L+WSPNG +++I T TDVDTSG SYYG TGL+ L ADG+Y+  VPL KEG + D +W P G   F+VLAG MP++ATLY+ KA PIF+FG A RN +S+SPHGRF+ LAGFGNLAG+MDFWDRNK K MG   S+ +  + WSP  RYF+TAT  PR+ VDN  K+F Y+G+GP+ + + ++  L++  FRPA  GV+P+RP +P RK ++ ++    P P+KP+ AYRPP STGAL+A++R+E    +GP+K+   +          PG     IPG++P    T    K  +R+  +K+ K +A      E AL    E E         A+  ++  +  K+ K + KKLKQIE LK R + GEKLN+DQQ KL  EA L  ++  L +
Sbjct:    5 APPPRIKFFLRGKGGVEAIWGPSSTQKDFKQRKPIRDEDFGKP-HADSVEFSQDGSKVVLVDTQ--KGFSIHCTETSAVSLQVSHAGIQAIAWSPLGNYLLTWERY---------------QKDSDAD------------NLLIWDASNGDILGRFPQRQYARDNWPFVEWSSDELICCRQTANGVMIYSGND--------FSKSLGHINLPNARSFSISPTNGP-YRVAIFVPEKKGKPASVKIFEYPNGLDAAVATKSFYKAQEVTLKWSPNGTSLIIETRTDVDTSGKSYYGETGLFFLQADGQYDCIVPLMKEGQVHDVQWEPTGRG-FVVLAGAMPSSATLYDQKANPIFDFGTASRNHISWSPHGRFLCLAGFGNLAGDMDFWDRNKLKKMGSANSNSATCHTWSPDSRYFLTATTFPRLRVDNGYKIFTYDGSGPIFQEQRKE--LYELKFRPAVAGVYPNRPQSPRRK-VDDETCAPAPIPAKPQ-AYRPPRSTGALSAMMRSEE---TGPRKLDKFRFHTPIPTAKVPGMAPSVIPGMSP---LTTSAPKKISRSARKKKAKDSAAAKVAIENALTQVCEEEP------TCASPELSESEKQKKLKNLAKKLKQIEALKERQVAGEKLNEDQQAKLEGEADLRHQIKCLGI 608          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|635369338|emb|CCI42427.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 447.973 bits (1151), Expect = 1.044e-146
Identity = 277/659 (42.03%), Postives = 369/659 (55.99%), Query Frame = 0
Query:    2 TAPPQAVKILLRSKAGVH-LQELTTGENGLPVLTPAPDEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYP-HFGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPP--PSKPKTAYRPPGSTGALAALIRAERDALSGPKK---------VAAGKGGGNSAYGAPGQ-PYIPGLAPAGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQAAAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKLEV 646
             APP  +K  LR K GV  +   +  +       P  DE  G P   D  EF  +G+   +V +   K   V   ET  V   V    IQA+++SP G +LLTWER                Q  S A             NLL+W + NG +V  F Q+ + +  WP ++W+ DE +C R TA  V +Y G E    S     ++     S  +SP  +P ++VA F PE  GKPASV+I++YP H    +ASKSF+KAQE  L+WSPNG +++I T TDVDTSG SYYG TGL+ L  DG+Y+  VPL KEG + D +W P G   F+VLAG MP++ATLY+ KA PIF+FG A RN +S+SPHGRF+ LAGFGNLAG+MDFWDRNK K MG   S+ +  + WSP  RYF+TAT  PR+ VDN  K+F Y+GAGP+   E ++  L++  FRPAA GV+P+RP +P RK    D  T  P   P+KP+ AYRPP STGAL+A++++E    +GP+K         V A K  G +    PG  P IP  AP   +    S    + K     K A E AL      E+        A + ++  +  K+ K + KK+KQIE LK R + GE LN+DQQ KL  EA L  ++  L +
Sbjct:    4 NAPPPKIKFFLRGKEGVEAIWGPSCTQRNFEEGKPIQDEDFGTP-HADHIEFTPNGTKAVLVDTQ--KGFSVHCTETSKVSLQVSHPGIQAIAWSPLGNYLLTWERY---------------QKDSEA------------DNLLIWDAINGNIVGQFPQRQYARDNWPFVEWSFDEVICCRQTANGVMIYSGNE---FSKSLDHINLPNARSFSISPTGNP-YKVAIFVPEKSGKPASVKIFEYPNHLNAFVASKSFYKAQEVTLKWSPNGTSLIIETRTDVDTSGKSYYGETGLFFLQTDGQYDCIVPLMKEGQVHDVQWDPTGRG-FVVLAGAMPSSATLYDQKANPIFDFGTASRNHISWSPHGRFLCLAGFGNLAGDMDFWDRNKLKKMGSANSNSATCHTWSPDSRYFVTATTFPRLRVDNGYKIFTYDGAGPIFHEERKE--LYELKFRPAAAGVYPNRPQSPRRK---TDDDTLAPEHTPAKPQ-AYRPPRSTGALSAMMKSEE---TGPRKLDNVRFHTPVPAVKVAGIAPSIIPGMSPLIPN-APKKIS---RSARKKKAKDSAAAKVAIENALAPVCAVES------TCAPSELSEAEKQKKLKNLAKKMKQIEALKDRQIAGETLNEDQQAKLKGEADLRHQMECLGI 608          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|675200183|ref|XP_008908976.1| (hypothetical protein PPTG_13264 [Phytophthora parasitica INRA-310] >gi|568091086|gb|ETN05912.1| hypothetical protein PPTG_13264 [Phytophthora parasitica INRA-310])

HSP 1 Score: 440.269 bits (1131), Expect = 1.515e-143
Identity = 267/619 (43.13%), Postives = 364/619 (58.80%), Query Frame = 0
Query:   38 DEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPH-FGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPK-TAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGGNSAYGAP-GQPYIPGLAP-------AGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQA--AAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKL 644
            DE+   P   DL EF  DG  V +V +T   ++R  D +TG V   V    + A+S+SP G+ LLTW+R      PQ  S                       GNL+VW +  G  VA F  K++ + +WP LQW+ DE++C R +A  V +Y G++ G+ S  +  +    +A+  V+P  S P++VA F PE KGKPASV+IYQ+P+      A+KSF+KAQ+  L+WSP G A++I T TD+DTSG SYYG TGL+ + +DG+Y+  VPL KEG + D  W P G   F+V+AG MPA ATLY+ KA P+FEFG A RN VS+SPHGRF+ LAGFGNL G+MDFW+RNK K MG  TS+ +  + WSP  RYF TAT  PR+ VDN  K+F+Y+G GP+H+   E   L+D  FRPAA   +P+RP +P RKG      ++  P + PK  AYRPP STGALAA++R E     G +K+   K      Y AP     IPG AP       A A     SK+  + KA++  +  A         + A   ++E A  + A +  E+  K+ K + KKLKQI+ +KA+   G+ LNDDQ  KL TE +L +E+A+L
Sbjct:   43 DESFDAPGSADLMEFTEDGKHVVLVRTTSGFTVR--DADTGAVVTEVANAGVHAVSWSPLGSHLLTWQR------PQKDSDL---------------------GNLIVWDAATGKEVARFNHKSYTRDKWPPLQWSSDETICARQSANGVVLYNGRDIGSGSIGQINLPN--VANFSVAP-GSAPYKVALFVPEKKGKPASVKIYQFPNSLDAPTATKSFYKAQDVTLKWSPTGSALIIETRTDIDTSGKSYYGETGLFFMQSDGEYDCIVPLTKEGTVHDVAWDPTGRG-FVVIAGAMPAHATLYDNKALPVFEFGAAPRNHVSWSPHGRFLCLAGFGNLRGDMDFWERNKLKKMGSATSNSATTFSWSPDSRYFATATTFPRLRVDNGFKIFRYDGTGPIHQE--ERGELYDLKFRPAAQDTYPNRPQSPRRKGEAAGFGSSEAPKAAPKPQAYRPPNSTGALAAMMRKEE---GGSRKLDRNK------YAAPRAASSIPGAAPRPIPGMGAAAAPKKLSKSARKKKAQEAAEARAAVEEALAKVSGAAPAKEEPAKPSPAEMTPEEKAKKVKGLLKKLKQIDAIKAKKEAGDSLNDDQLQKLKTEQALRDEVAEL 617          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|567956608|gb|ETK82228.1| (hypothetical protein L915_12354 [Phytophthora parasitica] >gi|567985292|gb|ETL35637.1| hypothetical protein L916_12270 [Phytophthora parasitica] >gi|568014698|gb|ETL88875.1| hypothetical protein L917_12110 [Phytophthora parasitica] >gi|568044945|gb|ETM42116.1| hypothetical protein L914_12194 [Phytophthora parasitica] >gi|570322882|gb|ETO70830.1| hypothetical protein F444_12741 [Phytophthora parasitica P1976] >gi|570946705|gb|ETP11962.1| hypothetical protein F441_12593 [Phytophthora parasitica CJ01A1] >gi|570979011|gb|ETP40080.1| hypothetical protein F442_12541 [Phytophthora parasitica P10297] >gi|970631896|gb|KUF78343.1| Eukaryotic translation initiation factor 2A [Phytophthora nicotianae])

HSP 1 Score: 440.269 bits (1131), Expect = 1.515e-143
Identity = 267/619 (43.13%), Postives = 364/619 (58.80%), Query Frame = 0
Query:   38 DEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPH-FGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPK-TAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGGNSAYGAP-GQPYIPGLAP-------AGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQA--AAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKL 644
            DE+   P   DL EF  DG  V +V +T   ++R  D +TG V   V    + A+S+SP G+ LLTW+R      PQ  S                       GNL+VW +  G  VA F  K++ + +WP LQW+ DE++C R +A  V +Y G++ G+ S  +  +    +A+  V+P  S P++VA F PE KGKPASV+IYQ+P+      A+KSF+KAQ+  L+WSP G A++I T TD+DTSG SYYG TGL+ + +DG+Y+  VPL KEG + D  W P G   F+V+AG MPA ATLY+ KA P+FEFG A RN VS+SPHGRF+ LAGFGNL G+MDFW+RNK K MG  TS+ +  + WSP  RYF TAT  PR+ VDN  K+F+Y+G GP+H+   E   L+D  FRPAA   +P+RP +P RKG      ++  P + PK  AYRPP STGALAA++R E     G +K+   K      Y AP     IPG AP       A A     SK+  + KA++  +  A         + A   ++E A  + A +  E+  K+ K + KKLKQI+ +KA+   G+ LNDDQ  KL TE +L +E+A+L
Sbjct:   43 DESFDAPGSADLMEFTEDGKHVVLVRTTSGFTVR--DADTGAVVTEVANAGVHAVSWSPLGSHLLTWQR------PQKDSDL---------------------GNLIVWDAATGKEVARFNHKSYTRDKWPPLQWSSDETICARQSANGVVLYNGRDIGSGSIGQINLPN--VANFSVAP-GSAPYKVALFVPEKKGKPASVKIYQFPNSLDAPTATKSFYKAQDVTLKWSPTGSALIIETRTDIDTSGKSYYGETGLFFMQSDGEYDCIVPLTKEGTVHDVAWDPTGRG-FVVIAGAMPAHATLYDNKALPVFEFGAAPRNHVSWSPHGRFLCLAGFGNLRGDMDFWERNKLKKMGSATSNSATTFSWSPDSRYFATATTFPRLRVDNGFKIFRYDGTGPIHQE--ERGELYDLKFRPAAQDTYPNRPQSPRRKGEAAGFGSSEAPKAAPKPQAYRPPNSTGALAAMMRKEE---GGSRKLDRNK------YAAPRAASSIPGAAPRPIPGMGAAAAPKKLSKSARKKKAQEAAEARAAVEEALAKVSGAAPAKEEPAKPSPAEMTPEEKAKKVKGLLKKLKQIDAIKAKKEAGDSLNDDQLQKLKTEQALRDEVAEL 617          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|570322901|gb|ETO70849.1| (hypothetical protein F444_12729 [Phytophthora parasitica P1976])

HSP 1 Score: 439.884 bits (1130), Expect = 3.634e-143
Identity = 267/619 (43.13%), Postives = 364/619 (58.80%), Query Frame = 0
Query:   38 DEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPH-FGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPK-TAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGGNSAYGAP-GQPYIPGLAP-------AGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQA--AAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKL 644
            DE+   P   DL EF  DG  V +V +T   ++R  D +TG V   V    + A+S+SP G+ LLTW+R      PQ  S                       GNL+VW +  G  VA F  K++ + +WP LQW+ DE++C R +A  V +Y G++ G+ S  +  +    +A+  V+P  S P++VA F PE KGKPASV+IYQ+P+      A+KSF+KAQ+  L+WSP G A++I T TD+DTSG SYYG TGL+ + +DG+Y+  VPL KEG + D  W P G   F+V+AG MPA ATLY+ KA P+FEFG A RN VS+SPHGRF+ LAGFGNL G+MDFW+RNK K MG  TS+ +  + WSP  RYF TAT  PR+ VDN  K+F+Y+G GP+H+   E   L+D  FRPAA   +P+RP +P RKG      ++  P + PK  AYRPP STGALAA++R E     G +K+   K      Y AP     IPG AP       A A     SK+  + KA++  +  A         + A   ++E A  + A +  E+  K+ K + KKLKQI+ +KA+   G+ LNDDQ  KL TE +L +E+A+L
Sbjct:   67 DESFDAPGSADLMEFTEDGKHVVLVRTTSGFTVR--DADTGAVVTEVANAGVHAVSWSPLGSHLLTWQR------PQKDSDL---------------------GNLIVWDAATGKEVARFNHKSYTRDKWPPLQWSSDETICARQSANGVVLYNGRDIGSGSIGQINLPN--VANFSVAP-GSAPYKVALFVPEKKGKPASVKIYQFPNSLDAPTATKSFYKAQDVTLKWSPTGSALIIETRTDIDTSGKSYYGETGLFFMQSDGEYDCIVPLTKEGTVHDVAWDPTGRG-FVVIAGAMPAHATLYDNKALPVFEFGAAPRNHVSWSPHGRFLCLAGFGNLRGDMDFWERNKLKKMGSATSNSATTFSWSPDSRYFATATTFPRLRVDNGFKIFRYDGTGPIHQE--ERGELYDLKFRPAAQDTYPNRPQSPRRKGEAAGFGSSEAPKAAPKPQAYRPPNSTGALAAMMRKEE---GGSRKLDRNK------YAAPRAASSIPGAAPRPIPGMGAAAAPKKLSKSARKKKAQEAAEARAAVEEALAKVSGAAPAKEEPAKPSPAEMTPEEKAKKVKGLLKKLKQIDAIKAKKEAGDSLNDDQLQKLKTEQALRDEVAEL 641          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|566019316|gb|ETI42227.1| (hypothetical protein F443_12624 [Phytophthora parasitica P1569])

HSP 1 Score: 437.958 bits (1125), Expect = 1.151e-142
Identity = 264/617 (42.79%), Postives = 362/617 (58.67%), Query Frame = 0
Query:   38 DEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPH-FGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPK-TAYRPPGSTGALAALIRAERDALSGPKKVAAGK----GGGNSAYGAPGQPYIPGL----APAGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQAAAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKL 644
            DE+   P   DL EF  DG  V +V +T   ++R  D +TG V   V    + A+S+SP G+ LLTW+R      PQ  S                       GNL+VW +  G  VA F  K++ + +WP L W+ DE++C R +A  V +Y G++ G+ S  +  +    +A+  V+P  S P++VA F PE KGKPASV+IYQ+P+      A+KSF+KAQ+  L+WSP G A++I T TD+DTSG SYYG TGL+ + +DG+Y+  VPL KEG + D  W P G   F+V+AG MPA ATLY+ KA P+FEFG A RN VS+SPHGRF+ LAGFGNL G+MDFW+RNK K MG  TS+ +  + WSP  RYF TAT  PR+ VDN  K+F+Y+G GP+H+   E   L+D  FRPAA   +P+RP +P RKG      ++  P + PK  AYRPP STGALAA++R E     G +K+   K       +S  GA  +P IPG+    AP   + +   K        +   + A   +   A AE E     + + A +A E+  K+ K + KKLKQI+ +KA+   G+ LNDDQ  KL TE +L +E+A+L
Sbjct:   43 DESFDAPGSADLMEFTEDGKHVVLVRTTSGFTVR--DADTGAVVTEVANAGVHAVSWSPLGSHLLTWQR------PQKDSDL---------------------GNLIVWDAATGKEVARFNHKSYTRDKWPPLLWSSDETICARQSANGVVLYNGRDIGSGSIGQINLPN--VANFSVAP-GSAPYKVALFVPEKKGKPASVKIYQFPNSLDAPTATKSFYKAQDVTLKWSPTGSALIIETRTDIDTSGKSYYGETGLFFMQSDGEYDCIVPLTKEGTVHDVAWDPTGRG-FVVIAGAMPAHATLYDNKALPVFEFGTAPRNHVSWSPHGRFLCLAGFGNLRGDMDFWERNKLKKMGSATSNSATTFSWSPDSRYFATATTFPRLRVDNGFKIFRYDGTGPIHQE--ERGELYDLKFRPAAQDTYPNRPQSPRRKGEAAGFGSSEAPKAAPKPQAYRPPNSTGALAAMMRKEE---GGSRKLDRNKYAAPRAASSIPGAAPRP-IPGMGAAAAPKKLSKSARKKKAQEAAEARAAVEEALAKVSGAAPAEEE---PAKPSPAEMAPEEKAKKVKGLLKKLKQIDAIKAKKEAGDSLNDDQLQKLKTEQALRDEVAEL 617          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|301113584|ref|XP_002998562.1| (eukaryotic translation initiation factor 2A, putative [Phytophthora infestans T30-4] >gi|262111863|gb|EEY69915.1| eukaryotic translation initiation factor 2A, putative [Phytophthora infestans T30-4])

HSP 1 Score: 435.647 bits (1119), Expect = 9.307e-142
Identity = 267/620 (43.06%), Postives = 364/620 (58.71%), Query Frame = 0
Query:   38 DEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPH-FGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPK-TAYRPPGSTGALAALIRAE--------RDALSGPKKVAAGKGGGNSAYGAPGQPYIPGLAPAGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQ---AAAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKL 644
            DE    P   DL EF  +G  V +V ++   ++R  D +TG V   V    I A+S+SP G+ LLTW+R      PQ  S                       GNL+VW +  G  VA F  K + + +WP LQW+ DE++C R +A  V +Y G++ G  S  +  +    +A+  V+P  S P++VA F PE KGKPASV+IYQ+P+      A+KSF+KAQ+   +WSP G A++I T TD+DTSG SYYG TGL+ L +DG+Y+  VPL K G + D  W P G   F+V+AG MPA ATLY+ KA PIFEFG A RN VS+SPHGRF+ LAGFGNL G+MDFW+RNK K MG  TS+ +  + WSP  RYF TAT  PR+ VDN  K+F+Y+G GP+H+   +   L+D  FRPAA   +P+RP +P RKG      ++  P + PK  AYRPP STGALAA++R E        R+  + P+ VA+      S  GA  +P IPG+  A A    +   +AR K  +E  +A      A A+       KE+    +A  +A E+  K+ K + KKLKQI+ +KA+   G+ LNDDQ  KL+TE +L +E+A+L
Sbjct:   43 DEDFDAPGSADLMEFTENGKLVVLVRTSSGFTVR--DADTGVVVTEVANAGIHAVSWSPLGSHLLTWQR------PQKESDL---------------------GNLIVWDAATGKEVARFNHKAYTRDKWPPLQWSSDETICARQSANGVVLYHGRDIGAGSIGQINLPN--VANFSVAP-GSAPYKVALFVPEKKGKPASVKIYQFPNSLDAPTATKSFYKAQDVTFKWSPTGSALIIETRTDIDTSGKSYYGETGLFFLQSDGEYDCIVPLTKAGTVHDVAWDPTGRG-FVVIAGAMPANATLYDNKALPIFEFGAAPRNHVSWSPHGRFLCLAGFGNLRGDMDFWERNKLKKMGSATSNSATTFSWSPDSRYFATATTFPRLRVDNGFKIFRYDGTGPIHQE--DRGELYDLKFRPAAQDTYPNRPQSPRRKGDAAGFGSSEAPKAAPKPQAYRPPNSTGALAAMMRKEEGGSRKLDRNKYAAPRFVAS------SVPGAAPRP-IPGMGAAAAPK--KLSKSARKKKAQEAAEARAAVDEALAKVSGTASTKEEPDKPSAVEMAPEEKAKKVKGLLKKLKQIDAIKAKKEAGDSLNDDQLQKLSTEQALRDEVAEL 618          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|695447251|ref|XP_009534690.1| (hypothetical protein PHYSODRAFT_258933 [Phytophthora sojae] >gi|348670007|gb|EGZ09829.1| hypothetical protein PHYSODRAFT_258933 [Phytophthora sojae])

HSP 1 Score: 433.721 bits (1114), Expect = 4.540e-141
Identity = 269/622 (43.25%), Postives = 359/622 (57.72%), Query Frame = 0
Query:   38 DEALGKPVPGDLTEFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPH-FGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPK-TAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGGNSAYGAP--GQPYIPGLAPAGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRK-------EQAAA----ALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKL 644
            DE    P   DL EF  DG  V +V +    ++R  D +TG V    E   I A+++SP G+ LLTW+R      PQ  S                       GNL+VW +  G  V  F  K++ + +WP LQW+ DE++C R +A  V +Y G++    S  +  +    +A+  V+P  S P++VA F PE KGKPASV+IYQ+P       A+KSF+KAQ+   +WSP G A++I T TD+DTSG SYYG TGL+ L +DG+Y+  VPL KEG + D  W P G   F+V+AG MPA ATLY+ KA P+FEFG A RN VS+SPHGRF+ LAGFGNL G+MDFW+RNK K MG  TS+ +  + WSP  RYF TAT  PR+ VDN  K+F+Y+G GP+H+   E   L+D  FRPAA  V+P+RP +P RKG E    ++  P + PK  AYRPP STGALAA++R E     G +K+   K      Y AP    P +PG+A A  +  G     A  K  K  +K   Q       A  E + K       EQA A    A +  E+  K+ K++ KKLKQI+ +KA+   G+ LNDDQ  KL TE +L +E+A+L
Sbjct:   42 DENFDAPGAADLMEFTEDGKLVVLVRTASGFTVR--DADTGAVVVEAENPGIHAVAWSPLGSQLLTWQR------PQKNSDL---------------------GNLIVWDAATGKEVERFNHKSYTRDKWPPLQWSSDETICARQSANGVVLYSGRDIAAGSIGQINLPN--VANFSVAP-GSAPYKVALFVPEKKGKPASVKIYQFPSSLDTPTATKSFYKAQDVTFKWSPTGSALIIETRTDIDTSGKSYYGETGLFFLQSDGEYDCIVPLTKEGTVHDVAWDPTGRG-FVVIAGTMPAHATLYDNKALPVFEFGAAPRNHVSWSPHGRFLCLAGFGNLRGDMDFWERNKLKKMGSATSNSATTFAWSPDSRYFATATTFPRLRVDNGFKVFRYDGTGPIHQE--ERGELYDLKFRPAAQDVYPNRPQSPRRKGEEEGFGSSSAPKAAPKPQAYRPPNSTGALAAMMRKEE---GGSRKLDRNK------YVAPRSSAPTVPGMA-APRSIPGMGAAAAPKKLSKSARKKKAQEAAEARAAVEEALAKVAGAAPAEQAPAKPSPAEMTPEEKAKKVKSLLKKLKQIDTIKAKKEAGDSLNDDQLEKLKTEQALRDEVAEL 618          
BLAST of EWM28572.1 vs. NCBI_GenBank
Match: gi|970659312|gb|KUF96961.1| (Leucine-rich repeat and IQ domain-containing protein 3 [Phytophthora nicotianae])

HSP 1 Score: 431.024 bits (1107), Expect = 1.218e-140
Identity = 262/606 (43.23%), Postives = 358/606 (59.08%), Query Frame = 0
Query:   51 EFCGDGSAVAIVTSTPTKSLRVVDVETGNVRWTVEGRNIQALSFSPQGTFLLTWERLASGGAPQPGSSTATSQSGSTAHTTPETATAGIKGNLLVWRSENGVLVAGFTQKTFRKPEWPTLQWTPDESLCFRATATDVHVYPGQEPGTASPEKFAVSGGGMASLRVSPNASPPHRVACFFPEAKGKPASVRIYQYPH-FGVALASKSFFKAQEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPAQFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKGMEGDSSTTVPPPSKPK-TAYRPPGSTGALAALIRAERDALSGPKKVAAGKGGGNSAYGAP-GQPYIPGLAP-------AGATTNGESKNTARNKARKEKKKAAEQALRAQAEAEAERIRKEQA--AAALVAAEDPVKRRKAVQKKLKQIEELKARAMGGEKLNDDQQNKLATEASLVEELAKL 644
            EF  DG  V +V +T   ++R  D +TG V   V    + A+S+SP G+ LLTW+R      PQ  S                       GNL+VW +  G  VA F  K++ + +WP LQW+ DE++C R +A  V +Y G++ G+ S  +  +    +A+  V+P  S P++VA F PE KGKPASV+IYQ+P+      A+KSF+KAQ+  L+WSP G A++I T TD+DTSG SYYG TGL+ + +DG+Y+  VPL KEG + D  W P G   F+V+AG MPA ATLY+ KA P+FEFG A RN VS+SPHGRF+ LAGFGNL G+MDFW+RNK K MG  TS+ +  + WSP  RYF TAT  PR+ VDN  K+F+Y+G GP+H+   E   L+D  FRPAA   +P+RP +P RKG      ++  P + PK  AYRPP STGALAA++R E     G +K+   K      Y AP     IPG AP       A A     SK+  + KA++  +  A         + A   ++E A  + A +  E+  K+ K + KKLKQI+ +KA+   G+ LNDDQ  KL TE +L +E+A+L
Sbjct:    2 EFTEDGKHVVLVRTTSGFTVR--DADTGAVVTEVANAGVHAVSWSPLGSHLLTWQR------PQKDSDL---------------------GNLIVWDAATGKEVARFNHKSYTRDKWPPLQWSSDETICARQSANGVVLYNGRDIGSGSIGQINLPN--VANFSVAP-GSAPYKVALFVPEKKGKPASVKIYQFPNSLDAPTATKSFYKAQDVTLKWSPTGSALIIETRTDIDTSGKSYYGETGLFFMQSDGEYDCIVPLTKEGTVHDVAWDPTGRG-FVVIAGAMPAHATLYDNKALPVFEFGAAPRNHVSWSPHGRFLCLAGFGNLRGDMDFWERNKLKKMGSATSNSATTFSWSPDSRYFATATTFPRLRVDNGFKIFRYDGTGPIHQE--ERGELYDLKFRPAAQDTYPNRPQSPRRKGEAAGFGSSEAPKAAPKPQAYRPPNSTGALAAMMRKEE---GGSRKLDRNK------YAAPRAASSIPGAAPRPIPGMGAAAAPKKLSKSARKKKAQEAAEARAAVEEALAKVSGAAPAKEEPAKPSPAEMTPEEKAKKVKGLLKKLKQIDAIKAKKEAGDSLNDDQLQKLKTEQALRDEVAEL 563          
The following BLAST results are available for this feature:
BLAST of EWM28572.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110990|gb|EWM28572.1|0.000e+0100.00eukaryotic translation initiation factor 2a [Nanno... [more]
gi|325182679|emb|CCA17134.1|1.578e-14742.12eukaryotic translation initiation factor 2A putati... [more]
gi|635369338|emb|CCI42427.1|1.044e-14642.03unnamed protein product [Albugo candida][more]
gi|675200183|ref|XP_008908976.1|1.515e-14343.13hypothetical protein PPTG_13264 [Phytophthora para... [more]
gi|567956608|gb|ETK82228.1|1.515e-14343.13hypothetical protein L915_12354 [Phytophthora para... [more]
gi|570322901|gb|ETO70849.1|3.634e-14343.13hypothetical protein F444_12729 [Phytophthora para... [more]
gi|566019316|gb|ETI42227.1|1.151e-14242.79hypothetical protein F443_12624 [Phytophthora para... [more]
gi|301113584|ref|XP_002998562.1|9.307e-14243.06eukaryotic translation initiation factor 2A, putat... [more]
gi|695447251|ref|XP_009534690.1|4.540e-14143.25hypothetical protein PHYSODRAFT_258933 [Phytophtho... [more]
gi|970659312|gb|KUF96961.1|1.218e-14043.23Leucine-rich repeat and IQ domain-containing prote... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2127rna2127Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications