EWM28531.1, cds2116 (CDS) Nannochloropsis gaditana

Overview
NameEWM28531.1
Unique Namecds2116
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:934914..935786 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28531.1
Productgcn5-related n-acetyltransferase
Orig transcript idgnl|cribi|Naga_100009g37.574.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:934914..935786 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008080N-acetyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
IPR000182GNAT_dom
Homology
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|585110949|gb|EWM28531.1| (gcn5-related n-acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
Query:    1 MLSPCRSSIGLFMILATFMPTAALSAFIPSSPTSISSIATTTTLRSRSNTARPSISLDSFFGRRPPRSTTTTVPSPPATSIIISEVSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQCADLRSRFGGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNPFAALWGQLSISQG 290
            MLSPCRSSIGLFMILATFMPTAALSAFIPSSPTSISSIATTTTLRSRSNTARPSISLDSFFGRRPPRSTTTTVPSPPATSIIISEVSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQCADLRSRFGGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNPFAALWGQLSISQG
Sbjct:    1 MLSPCRSSIGLFMILATFMPTAALSAFIPSSPTSISSIATTTTLRSRSNTARPSISLDSFFGRRPPRSTTTTVPSPPATSIIISEVSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQCADLRSRFGGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNPFAALWGQLSISQG 290          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|553188842|ref|XP_005854878.1| (gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526] >gi|422294186|gb|EKU21486.1| gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0
Identity = 287/290 (98.97%), Postives = 288/290 (99.31%), Query Frame = 0
Query:    1 MLSPCRSSIGLFMILATFMPTAALSAFIPSSPTSISSIATTTTLRSRSNTARPSISLDSFFGRRPPRSTTTTVPSPPATSIIISEVSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQCADLRSRFGGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNPFAALWGQLSISQG 290
            MLSPCRSSIGLFMILATFM TAALSAFIPSSPTSISSIATTTTLRSRSNTARPSISLDSFFGRRPPRSTTTTVPSPPATSIIISEVSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQ ADLRSRFGGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVR+WGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNPFAALWGQLSISQG
Sbjct:    1 MLSPCRSSIGLFMILATFMSTAALSAFIPSSPTSISSIATTTTLRSRSNTARPSISLDSFFGRRPPRSTTTTVPSPPATSIIISEVSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQFADLRSRFGGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRTWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNPFAALWGQLSISQG 290          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|298710349|emb|CBJ31967.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 154.066 bits (388), Expect = 8.717e-41
Identity = 85/192 (44.27%), Postives = 122/192 (63.54%), Query Frame = 0
Query:   88 RQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQCADLRSRFGGRAVGGSLYLQAVDA---DGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKN 276
            R+DL  A ++CI+ FFG  D  +P ++ QL  LL EQ  DL SR   R    S+  +A+D    DG MVGFVEV  T   KYGM   G+ + D RP ++NL+V P +RR GVG  L+ ACE++V++W +DE+ILQVE++N+ A   Y   G+  L+ D   R+Y+ SG  ++NVR +K+T+RKAL  S  ++
Sbjct:   39 REDLDEAGALCIKVFFGQPD--SPWKAAQLRQLLHEQRQDLESRCSRRE---SVMFKAIDTRRKDG-MVGFVEVSETSGSKYGM-GAGITLADTRPVVSNLAVDPRVRRCGVGSALMEACEDLVKTWSFDEIILQVEEANEAALAFYGGKGFKKLFVDKAARRYDTSGFLLQNVRTSKLTMRKALGSSTKRS 223          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|219116839|ref|XP_002179214.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409105|gb|EEC49037.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 99.3673 bits (246), Expect = 2.657e-20
Identity = 78/236 (33.05%), Postives = 106/236 (44.92%), Query Frame = 0
Query:   95 ASVCIESFFGTAD---RLNPVRSMQLATLLDEQCADLRSR-----------FGGRA------------------VGGSLYLQAVDAD----GAMVGFVEVGITQSLKYGMEQYGVPVRDE-------------RPYLANLSVRPALRRQGVGRRLVHACEEMV-RSWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKAL--VPSAAKNPF 278
            + VCI++FF   +   ++ P ++ QL  L   Q +DL+ R              R                   V   L LQ    +    G ++GFVEV       YG+    V   DE             RP L NLSVR   R+ GVG +LV ACE+ V + WG  E+IL+VED N  ARN Y   GY  L+ D   R+Y+ +G+ +K VR  +  +RKAL  V   A N F
Sbjct:  101 SEVCIQAFFNDGEQHRKIPPWKAWQLGYLRQLQQSDLKVRRRKYPDTNFMLVARRVYPISEMPGAVRHTPLILDVSQVLNLQPQPEEDYVRGEILGFVEVT---KKPYGLGSEKVGFDDESRIKLRKMSFYESRPVLTNLSVRYEARQSGVGSKLVQACEDRVLKDWGMKEMILEVEDDNDNARNFYLKRGYKVLFEDPASRRYDTTGVWLKQVRCKRQIMRKALGAVELVALNAF 333          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|298708698|emb|CBJ49195.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 98.2117 bits (243), Expect = 2.862e-20
Identity = 67/205 (32.68%), Postives = 107/205 (52.20%), Query Frame = 0
Query:   86 VSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQCADLRSRFG---GRAVGGSLYLQAVDADGAMVGF--VEVGITQSLKYGMEQYGVPVRDE----RPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNPFAAL 281
            V+  D+   A   +E+F+  A     V   Q  +L+ E  +D R R+G   G     S+ + A    G ++G   VEV +    + G++  G+    E    RP LANL+V  + RR+G+ +RLV  CE++ R WGYDE++L VE++N++AR LY  +GY  L+ D   +K       I++V    V +R+ L  +   N FA +
Sbjct:   96 VNDADIPETAEFFVENFWDDA-----VAPSQKRSLVRELVSDYRRRYGTLMGNRKLQSMLMVARGNGGEIIGCIAVEVSVCMGERVGVKARGISPNAEGAELRPILANLAVARSERRKGLAKRLVKHCEDVCRGWGYDEVLLLVEENNKRARRLYSKLGYKMLFRDTKAKKILPDSYQIRDVPCVNVCMRRDLNANIFSNLFAMI 295          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|397617359|gb|EJK64398.1| (hypothetical protein THAOC_14868 [Thalassiosira oceanica])

HSP 1 Score: 90.5077 bits (223), Expect = 3.007e-17
Identity = 71/246 (28.86%), Postives = 108/246 (43.90%), Query Frame = 0
Query:   81 IIISEVSRQD---LRLAASVCIESFFG-----------TADRLNPV-RSMQLATLLDEQCADLRSRFGGRAVGGSLYLQAVDA----------------------------------------DGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSW--GYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKAL 269
             II  + R D   +   A++C++ FF            +A +  P  RS+QLA L   Q  D+RSR   RA      ++ + A                                         G ++GF EV      K+G+ + G      RPY++NLSV  + R  G+G RLV ACEE V  W  G+ E+ LQVE+ N+ A   Y+  GY  +++D T ++Y+ SG  +K  ++ K  + K L
Sbjct:   66 FIIERIGRGDDDQIEKIAAMCVDVFFNPSKNLEAGRQLSASKNTPAWRSLQLAYLRSAQIGDMRSR---RAFKKDSKVELIIARRIDQKPPAELEEHCEVMGTNTTGIYNSEQLLLGESGDLVKGPIIGFCEV---SERKFGLGK-GYNDTKARPYISNLSVIESARESGIGSRLVDACEEAVLDWDAGHKEIALQVEEDNKSAIQFYKKRGYEYVFSDPTCKRYDASGFFLKESKVTKFAMTKRL 304          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|223996399|ref|XP_002287873.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976989|gb|EED95316.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 87.4261 bits (215), Expect = 5.275e-16
Identity = 69/237 (29.11%), Postives = 105/237 (44.30%), Query Frame = 0
Query:   81 IIISEVSR---QDLRLAASVCIESFFGTADRLN---------PVRSMQLATLLDEQCADLRSRFGGRA-------VGGSLY--------LQAVDAD-------------------GAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSWG--YDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKAL 269
             II  + R    +L+  + +CI+ FF   + +          P +S+QLA L   Q  DL +R   +        V   +Y        ++ VDA                    G ++G+ EV        G  +        RPYL+NLSV    R+ GVG +L+ ACEE V +W   Y E++LQVE+ N  A   Y+  G+  ++ D T R+Y+ SG+ +K  RI K  + K L
Sbjct:   90 FIIERIGRGTESELKEISRLCIDVFFNKQENVEGLASNKQVAPWKSVQLAYLRTYQYGDLMARNAFKQNEQVDLIVARRVYPIKQQTDKMKMVDASQIYNLGQTSAKRNAQQFAAGEIIGYAEVSEKIFGLGGKFETRSSEEKLRPYLSNLSVVEYARQSGVGSKLLDACEEAVLNWNATYSEIVLQVEEDNTSAIKFYKRRGWEFVFADPTCRRYDTSGLFLKETRITKYAMLKRL 326          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|303290360|ref|XP_003064467.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226454065|gb|EEH51372.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 85.8853 bits (211), Expect = 8.062e-16
Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 0
Query:   89 QDLRLAASVCIESFF--GTADRLNPVRSMQLATLLDEQCADLRSRFGGRAVGGSLYLQAVDADGAMVGFV--EV----GITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGY 236
            QD   +A+V +++FF  G     N +   +L+ L   Q  DL  R+  R       ++  D +G +VG V  EV    GI    +   E  G  +  +RP +ANL+V  + RR+GV +RL+ A E+ +R WGYDE +L VE SN +A+ LY  +GY
Sbjct:   69 QDYNASANVFVDAFFLRGKPAGDNAITPSELSYLRGAQRKDLTRRYNRRGDAAMFVIRDDDGNGDVVGCVGAEVQRFQGIVPLSRADAETKGEVL--DRPVIANLAVAASARRRGVAKRLMRAVEDEIRGWGYDEAVLVVESSNGKAKGLYGKLGY 222          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|505041036|ref|WP_015228138.1| (N-acetyltransferase [Dactylococcopsis salina] >gi|428692975|gb|AFZ49125.1| acetyltransferase [Dactylococcopsis salina PCC 8305])

HSP 1 Score: 83.9593 bits (206), Expect = 8.177e-16
Identity = 55/173 (31.79%), Postives = 81/173 (46.82%), Query Frame = 0
Query:   68 STTTTVPSPPATSIIISEVSRQDLRLAASVCIESFF---GTADRLNPVRSMQLATLLDEQCADLRSRF-GGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGY 236
            S +   P P   S  +     QDL   + V   SF    G    + P   + +         D+RSR  G RA  G L   A      +VG VE+G++        +  +P + E  Y++NL+V P  RRQG+ R L+ +CE++   WG+  + L V D+NQQA+ LY   GY
Sbjct:   20 SLSNPYPHPQVESFTVRHARTQDLGAVSEVLTHSFHSCQGWGILMYPFLKLGIY-------EDIRSRLCGDRAHYGCLV--ATTTSDKIVGVVELGLS------CPEGWIPKQYESTYISNLAVSPNYRRQGIARHLLRSCEKLTSEWGFRSVYLHVLDNNQQAQQLYDQCGY 177          
BLAST of EWM28531.1 vs. NCBI_GenBank
Match: gi|752565164|ref|WP_041236393.1| (GNAT family N-acetyltransferase [Cyanothece sp. PCC 7425])

HSP 1 Score: 83.5741 bits (205), Expect = 8.276e-16
Identity = 58/157 (36.94%), Postives = 80/157 (50.96%), Query Frame = 0
Query:   90 DLRLAASVCIESFFGTADRL---NPVRSMQLATLLDEQCADLRSRFGGRAVGGSLYL----QAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDE---RPYLANLSVRPALRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQQARNLYRDMGY 236
            DL   A V IESF      L   +PV  + +         DLRSR  G  +  +  +    Q++  +  ++G VEVG+              V D+    PYL+NL+VRP  RRQGV + L+ ACE+ VR WG+++L L V + NQ AR LYR  GY
Sbjct:   28 DLAEVAEVIIESFHSPHSWLAWFSPVLKLGIYQ-------DLRSRNSGGMLHYACLVATEQQSMQKEKKLLGTVEVGLR------------LVGDQLPRSPYLSNLAVRPIYRRQGVAQHLLLACEQTVRQWGFEDLYLHVLEDNQIARELYRKAGY 165          
The following BLAST results are available for this feature:
BLAST of EWM28531.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110949|gb|EWM28531.1|0.000e+0100.00gcn5-related n-acetyltransferase [Nannochloropsis ... [more]
gi|553188842|ref|XP_005854878.1|0.000e+098.97gcn5-related n-acetyltransferase [Nannochloropsis ... [more]
gi|298710349|emb|CBJ31967.1|8.717e-4144.27conserved unknown protein [Ectocarpus siliculosus][more]
gi|219116839|ref|XP_002179214.1|2.657e-2033.05predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|298708698|emb|CBJ49195.1|2.862e-2032.68conserved unknown protein [Ectocarpus siliculosus][more]
gi|397617359|gb|EJK64398.1|3.007e-1728.86hypothetical protein THAOC_14868 [Thalassiosira oc... [more]
gi|223996399|ref|XP_002287873.1|5.275e-1629.11predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|303290360|ref|XP_003064467.1|8.062e-1635.90predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|505041036|ref|WP_015228138.1|8.177e-1631.79N-acetyltransferase [Dactylococcopsis salina] >gi|... [more]
gi|752565164|ref|WP_041236393.1|8.276e-1636.94GNAT family N-acetyltransferase [Cyanothece sp. PC... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2124rna2124Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications