EWM30519.1, cds211 (CDS) Nannochloropsis gaditana

Overview
NameEWM30519.1
Unique Namecds211
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:539589..540599 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30519.1
Productnuclear migration protein nudC putative
Orig transcript idgnl|cribi|Naga_100013g4.9807.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:539589..540599 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR007052CS_dom
IPR025934NudC_N_dom
IPR008978HSP20-like_chaperone
Homology
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|585113183|gb|EWM30519.1| (nuclear migration protein nudC putative [Nannochloropsis gaditana])

HSP 1 Score: 692.575 bits (1786), Expect = 0.000e+0
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query:    1 MHRHTYVEKKTMGTEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPPGNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATIK 336
            MHRHTYVEKKTMGTEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPPGNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATIK
Sbjct:    1 MHRHTYVEKKTMGTEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPPGNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATIK 336          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|675204523|ref|XP_008911146.1| (hypothetical protein PPTG_15633 [Phytophthora parasitica INRA-310] >gi|567952606|gb|ETK78278.1| hypothetical protein L915_15622 [Phytophthora parasitica] >gi|567981265|gb|ETL31708.1| hypothetical protein L916_15518 [Phytophthora parasitica] >gi|568010753|gb|ETL84936.1| hypothetical protein L917_15340 [Phytophthora parasitica] >gi|568088516|gb|ETN03373.1| hypothetical protein PPTG_15633 [Phytophthora parasitica INRA-310] >gi|570318881|gb|ETO66829.1| hypothetical protein F444_16062 [Phytophthora parasitica P1976] >gi|570942688|gb|ETP07945.1| hypothetical protein F441_15907 [Phytophthora parasitica CJ01A1] >gi|970633329|gb|KUF79040.1| Nuclear migration protein nudC [Phytophthora nicotianae] >gi|970658420|gb|KUF96186.1| Nuclear migration protein nudC [Phytophthora nicotianae])

HSP 1 Score: 321.627 bits (823), Expect = 4.820e-106
Identity = 170/324 (52.47%), Postives = 219/324 (67.59%), Query Frame = 0
Query:   14 TEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPP--GNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            +E  RFD +LL IAQ  +GI+ LL+   SFLRRKTDF+TGA    VE+TIL +VRKQ  +AE+ Q  + + +EAE+ R++E +++ K + K  +KAKD                    E+  D +    ST     P++   K  ADGEE+++  PP  GNGG TD+Y+WTQ L E  +N  VP GT+SR + V+I   ++RV L+GG T V+G LY  +KVDDSFWTLEDG  + I LQK+N MEWWK  I GDPEIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLP+SD+ +K+E+L+KFM QHPEMDFS A I
Sbjct:    2 SETDRFDSMLLTIAQSQRGIEPLLDTVFSFLRRKTDFFTGAEPQVVEDTILKSVRKQAALAEKDQFHK-KQQEAEKRRKQEAVKLEK-RQKKEEKAKDP---------------PRFEEITDDDAETKESTPEQASPQKTATK--ADGEEKEDNGPPLVGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVDVEIRAGKMRVGLRGGETFVDGPLYNKVKVDDSFWTLEDGNRICIYLQKDNQMEWWKTIIQGDPEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPSSDDMQKQEILQKFMAQHPEMDFSKAKI 306          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|570973327|gb|ETP35988.1| (hypothetical protein F442_15928 [Phytophthora parasitica P10297])

HSP 1 Score: 319.701 bits (818), Expect = 2.698e-105
Identity = 169/324 (52.16%), Postives = 218/324 (67.28%), Query Frame = 0
Query:   14 TEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPP--GNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            +E  RFD +LL IAQ  +GI+ LL+   SFLRRKTDF+TG     VE+TIL +VRKQ  +AE+ Q  + + +EAE+ R++E +++ K + K  +KAKD                    E+  D +    ST     P++   K  ADGEE+++  PP  GNGG TD+Y+WTQ L E  +N  VP GT+SR + V+I   ++RV L+GG T V+G LY  +KVDDSFWTLEDG  + I LQK+N MEWWK  I GDPEIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLP+SD+ +K+E+L+KFM QHPEMDFS A I
Sbjct:    2 SETDRFDSMLLTIAQSQRGIEPLLDTVFSFLRRKTDFFTGVEPQVVEDTILKSVRKQAALAEKDQFHK-KQQEAEKRRKQEAVKLEK-RQKKEEKAKDP---------------PRFEEITDDDAETKESTPEQASPQKTATK--ADGEEKEDNGPPLVGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVDVEIRAGKMRVGLRGGETFVDGPLYNKVKVDDSFWTLEDGNRICIYLQKDNQMEWWKTIIQGDPEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPSSDDMQKQEILQKFMAQHPEMDFSKAKI 306          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|566015149|gb|ETI38060.1| (hypothetical protein F443_16078 [Phytophthora parasitica P1569] >gi|568040657|gb|ETM38105.1| hypothetical protein L914_15473 [Phytophthora parasitica])

HSP 1 Score: 313.538 bits (802), Expect = 4.853e-103
Identity = 166/316 (52.53%), Postives = 214/316 (67.72%), Query Frame = 0
Query:   22 LLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPP--GNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            +LL IAQ  +GI+ LL+   SFLRRKTDF+TGA    VE+TIL +VRKQ  +AE+ Q  + + +EAE+ R++E +++ K + K  +KAKD                    E+  D +    ST     P++   K  ADGEE+++  PP  GNGG TD+Y+WTQ L E  +N  VP GT+SR + V+I   ++RV L+GG T V+G LY  +KVDDSFWTLEDG  + I LQK+N MEWWK  I GDPEIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLP+SD+ +K+E+L+KFM QHPEMDFS A I
Sbjct:    1 MLLTIAQSQRGIEPLLDTVFSFLRRKTDFFTGAEPQVVEDTILKSVRKQAALAEKDQFHK-KQQEAEKRRKQEAVKLEK-RQKKEEKAKDP---------------PRFEEITDDDAETKESTPEQASPQKTATK--ADGEEKEDNGPPLVGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVDVEIRAGKMRVGLRGGETFVDGPLYNKVKVDDSFWTLEDGNRICIYLQKDNQMEWWKTIIQGDPEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPSSDDMQKQEILQKFMAQHPEMDFSKAKI 297          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|695431833|ref|XP_009530785.1| (hypothetical protein PHYSODRAFT_335134 [Phytophthora sojae] >gi|348673537|gb|EGZ13356.1| hypothetical protein PHYSODRAFT_335134 [Phytophthora sojae])

HSP 1 Score: 305.064 bits (780), Expect = 1.469e-99
Identity = 166/328 (50.61%), Postives = 214/328 (65.24%), Query Frame = 0
Query:   14 TEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKP-KLDA---DGEEEKEEAPP--GNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            +E  RFD +LL IAQ  +GI+ LL+   SFLRRKTDF+TGA    +E+TIL +VRKQ  +AE+ Q  + + +EAE+ R++E  R A                 ++             E+  D   DV +  A+  P++  P K+DA   +G+EE++  PP  GNGG TD+Y+WTQ L E  +N  VP GT+SR + V+I   +LRV L+G    V+G LY  +KVDDSFWTLEDG  + I LQK+N MEWWK  I GD EIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLPTSD+ +K+E+L+KFM QHPEMDFS A I
Sbjct:    2 SETDRFDSMLLTIAQSQRGIEPLLDTVFSFLRRKTDFFTGAEPQVIEDTILKSVRKQAALAEKDQFHK-KQQEAEKRRKQEAARKAA---------------KLEKKQKKEEEAPRFEEITDDA--DVETKEAS--PEQASPQKVDAAANEGDEEEDNGPPLVGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVDVEIRAGKLRVGLRGAEPFVDGSLYNKVKVDDSFWTLEDGNRICIYLQKDNQMEWWKTIIQGDAEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPTSDDMQKQEILQKFMAQHPEMDFSKAKI 309          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|635364070|emb|CCI47434.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 303.523 bits (776), Expect = 6.526e-99
Identity = 161/327 (49.24%), Postives = 208/327 (63.61%), Query Frame = 0
Query:   16 DGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPPGNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGP-------TLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            D RFD LLLN+AQQ  GI+ LL+   SFLRRKTDF++GA+ S+VEE +L+ +RKQ   AE+    + + +E +E              KA +K K     T   + S   S     E+  D + +V    +       K K+D + +E+    P GNGG T++Y+WTQ L E  +N P+P GT+S+DL+V I  K L V L+ G         L +GELY+ + VDD FWT+EDG  + I LQK+N MEWW C + GDPEIDT KV PENSKLSDLDA+TRQTVEKMMFDQRQK MGLP+SD+ +K+EML+KFM QHPEMDFS A I
Sbjct:    8 DERFDGLLLNMAQQKHGIEPLLDTVFSFLRRKTDFFSGASTSRVEEMVLSTIRKQAAQAEKDAASKRKQQETKE--------------KAQKKPK-----TPIKSESESESVPRFEEISDDNAAEVKEADSLT-----KTKVDTNDDEK---PPEGNGGKTEKYVWTQTLQEANVNFPLPEGTKSKDLNVKIQSKNLTVVLRKGSHGRADDIVLADGELYEKVMVDDCFWTVEDGNRLCIYLQKKNQMEWWNCILKGDPEIDTKKVQPENSKLSDLDADTRQTVEKMMFDQRQKAMGLPSSDDMQKQEMLQKFMAQHPEMDFSKAKI 307          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|301093472|ref|XP_002997582.1| (nuclear migration protein nudC, putative [Phytophthora infestans T30-4] >gi|262110545|gb|EEY68597.1| nuclear migration protein nudC, putative [Phytophthora infestans T30-4])

HSP 1 Score: 297.745 bits (761), Expect = 9.435e-97
Identity = 157/324 (48.46%), Postives = 203/324 (62.65%), Query Frame = 0
Query:   14 TEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPP--GNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            +E  RFD +LL IAQ  +GI+ LL+   SFLRRKTDF+ GA +  +EETIL +V  Q     R +            R++E  ++ K++ K  Q+ K  N    +  T    ++T              +T     P+E     +   EEE++  PP  GNGG TD+Y+WTQ L E  IN  VP GT+SR + V+I   +LRV L+GG T V+G LY  +K+DDSFWTLEDG  + I LQK+N MEWWK  + GD EIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLP+SDE +K+E+L+KFM QHPEMDFS A +
Sbjct:    2 SETDRFDSMLLTIAQSRRGIEPLLDTVFSFLRRKTDFFAGAESQVIEETILKSVLPQKATGSRKR------------RKQEEAQLEKIQ-KKEQEEKAKNPPRFEEITDGDNTETK------------EATPEQASPQEINTTKEVGDEEEEDNGPPLVGNGGQTDKYVWTQTLQEAQINFAVPEGTKSRQVDVEIRAGKLRVGLRGGETFVDGPLYNKVKMDDSFWTLEDGNRICIYLQKDNQMEWWKTIVQGDAEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPSSDEMQKQEILQKFMAQHPEMDFSKAKV 300          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|1214710421|gb|OWZ21512.1| (Nuclear migration protein nudC [Phytophthora megakarya])

HSP 1 Score: 293.123 bits (749), Expect = 9.654e-95
Identity = 156/324 (48.15%), Postives = 211/324 (65.12%), Query Frame = 0
Query:   14 TEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPP--GNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            TE  RFD +LLNIAQ  +GI+ LL+   SFLRRKTDF+TGA    +E+T+L +VRKQ  + E+ Q ++ + +EAE+ +++E  R                A  ++       +     E+  D   +    +  +   ++      + +EE+++ PP  GNGG TD+Y+WTQ L E  +N  VP GT+SR + V+I   +LRV L+GG T V+G L+K +KVDDSFWTLEDG  + I LQK+N MEWWK  + GD EIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLPTSD+ +K+++L+KFM QHPEMDFS A I
Sbjct:    2 TETDRFDSMLLNIAQSQRGIEPLLDTVFSFLRRKTDFFTGAEPKVIEDTVLKSVRKQAALTEKDQFQK-KQQEAEKRQKQEAAR---------------KAAELEKKQKKEENTPRFEEITDDDEPEAKEPSPEQTSPQKTSTTTKEEDEEEDDGPPPVGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVDVEIRAGKLRVGLRGGETFVDGPLHKKVKVDDSFWTLEDGNRICIYLQKDNQMEWWKTIMEGDDEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPTSDDIQKQDVLQKFMAQHPEMDFSKAKI 309          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|673051275|ref|XP_008879598.1| (hypothetical protein H310_13749 [Aphanomyces invadans] >gi|574464627|gb|ETV91672.1| hypothetical protein H310_13749 [Aphanomyces invadans])

HSP 1 Score: 292.738 bits (748), Expect = 1.795e-94
Identity = 157/327 (48.01%), Postives = 205/327 (62.69%), Query Frame = 0
Query:   14 TEDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEE---APP--GNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            +++ RFD LL+ +AQQ  GI+ +L     FLRRKTDF++GAT   +E+ +L  VRK+  +AER   E    R  EE  +++R+   + K +    ++ +         S     T+  ++        ++  A   P    P    D  E+ ++   APP  GNGG TD Y+WTQ L E  + +PVP GT S+ + VD+  K L+V LK  P +V+G+L+K IKV+DSFWTLED   + + LQKEN MEWWKC + GD EIDT KV PENSKLSDLD ETRQTVEKMMFDQRQKQMGLPTSDE  K+E+L KFMK HPEMDFS A I
Sbjct:    2 SDEQRFDGLLMQMAQQQNGIEPMLTSVFGFLRRKTDFFSGATQEAIEQMVLTVVRKESAIAER---ERYDRRVQEEKDKKKRLEAKRKKEEEEAASRKTQ--------SRFEEITDDEDVVPSVPVKTSAPVAAPSPVTAAPAPAGDNAEDDDKDDGAPPLEGNGGKTDNYVWTQTLQEAHVTIPVPQGTTSKQVVVDLRSKTLKVGLKSQPLIVDGDLHKKIKVEDSFWTLEDNNRICVYLQKENQMEWWKCIMVGDVEIDTKKVQPENSKLSDLDGETRQTVEKMMFDQRQKQMGLPTSDELGKQEILNKFMKAHPEMDFSKAKI 317          
BLAST of EWM30519.1 vs. NCBI_GenBank
Match: gi|325190945|emb|CCA25430.1| (nuclear migration protein nudC putative [Albugo laibachii Nc14])

HSP 1 Score: 290.426 bits (742), Expect = 7.378e-94
Identity = 155/327 (47.40%), Postives = 205/327 (62.69%), Query Frame = 0
Query:   16 DGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDVASTAATKEPKEEKPKLDADGEEEKEEAPPGNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGG-------PTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATI 335
            D RFD LLLN+AQQ  GI+ LL+   SFLRRKTDF++GA+AS+VE+ +L+ VRKQ  +AE+         +A+  R+++       K +++QK           A +         E+  D   D  + +  +  K++            E+ P GNGG T++Y WTQ L E  +N P+P GT+ ++L+V I  + L+V LK G         L +GELY+ + VDD FWT+EDG  + I LQK N MEWW C + GDPEIDT KV PENSKLSDLDA+TRQTVEKMMFDQRQK MGLP+SD+ +K+EML+KFM QHPEMDFS A I
Sbjct:    8 DERFDGLLLNMAQQKHGIEPLLDTVFSFLRRKTDFFSGASASRVEDLVLSTVRKQAALAEK---------DADNKRKQQE------KKESSQKK----------AKTPTEPVPRFEEITDDKPIDTKTPSPIETDKDDD-----------EKPPEGNGGKTEKYEWTQTLQEANVNFPLPEGTKPKELNVVIQSRNLQVVLKKGFNGREKDTVLADGELYEKVMVDDCFWTVEDGNRLCIYLQKINQMEWWNCILKGDPEIDTKKVQPENSKLSDLDADTRQTVEKMMFDQRQKAMGLPSSDDMQKQEMLQKFMAQHPEMDFSKAKI 298          
The following BLAST results are available for this feature:
BLAST of EWM30519.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113183|gb|EWM30519.1|0.000e+0100.00nuclear migration protein nudC putative [Nannochlo... [more]
gi|675204523|ref|XP_008911146.1|4.820e-10652.47hypothetical protein PPTG_15633 [Phytophthora para... [more]
gi|570973327|gb|ETP35988.1|2.698e-10552.16hypothetical protein F442_15928 [Phytophthora para... [more]
gi|566015149|gb|ETI38060.1|4.853e-10352.53hypothetical protein F443_16078 [Phytophthora para... [more]
gi|695431833|ref|XP_009530785.1|1.469e-9950.61hypothetical protein PHYSODRAFT_335134 [Phytophtho... [more]
gi|635364070|emb|CCI47434.1|6.526e-9949.24unnamed protein product [Albugo candida][more]
gi|301093472|ref|XP_002997582.1|9.435e-9748.46nuclear migration protein nudC, putative [Phytopht... [more]
gi|1214710421|gb|OWZ21512.1|9.654e-9548.15Nuclear migration protein nudC [Phytophthora megak... [more]
gi|673051275|ref|XP_008879598.1|1.795e-9448.01hypothetical protein H310_13749 [Aphanomyces invad... [more]
gi|325190945|emb|CCA25430.1|7.378e-9447.40nuclear migration protein nudC putative [Albugo la... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna211rna211Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications