EWM28535.1, cds2105 (CDS) Nannochloropsis gaditana

Overview
NameEWM28535.1
Unique Namecds2105
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:917432..918472 -

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Properties
Property NameValue
Protein idEWM28535.1
ProductLeucine-rich repeat, ribonuclease inhibitor subtype
Orig transcript idgnl|cribi|Naga_100009g46.578.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:917432..918472 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR003590Leu-rich_rpt_RNase_inh_sub-typ
Homology
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BLAST of EWM28535.1 vs. NCBI_GenBank
Match: gi|585110953|gb|EWM28535.1| (Leucine-rich repeat, ribonuclease inhibitor subtype [Nannochloropsis gaditana])

HSP 1 Score: 699.123 bits (1803), Expect = 0.000e+0
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0 
Query:    1 MRLSHNKRVCISSLSQDLCVHIVAFLRPHDVNKLGQASKIFYSKKLCDFIAYIDGKLRFPDRLVNKLHLLKRLEVLNLKGNKLSNEGSWALSKFLALPSSASSLQRLDLSGLFLTPSGITLLAKSLATTTDESYRSTNGGHRRDKRHKCSGSPLQAEFSQSFLSIDTSASYSENCVGITPGMTTSLSSAYFSKNLEPQKPLLLRELTLAMNTIGDSGSDALCNLLESGDCQLLQSLDLRNTGIGLRGVLHLARGLARCPLLTMLSLSNNPLDVLYDNQVQSCSPDSVLHGTEEVGTGTNSVLSAPIDFSRKAWSALGRALPLSLRHLNLFNTTLNSMVMHRLVLNW 346
            MRLSHNKRVCISSLSQDLCVHIVAFLRPHDVNKLGQASKIFYSKKLCDFIAYIDGKLRFPDRLVNKLHLLKRLEVLNLKGNKLSNEGSWALSKFLALPSSASSLQRLDLSGLFLTPSGITLLAKSLATTTDESYRSTNGGHRRDKRHKCSGSPLQAEFSQSFLSIDTSASYSENCVGITPGMTTSLSSAYFSKNLEPQKPLLLRELTLAMNTIGDSGSDALCNLLESGDCQLLQSLDLRNTGIGLRGVLHLARGLARCPLLTMLSLSNNPLDVLYDNQVQSCSPDSVLHGTEEVGTGTNSVLSAPIDFSRKAWSALGRALPLSLRHLNLFNTTLNSMVMHRLVLNW
Sbjct:    1 MRLSHNKRVCISSLSQDLCVHIVAFLRPHDVNKLGQASKIFYSKKLCDFIAYIDGKLRFPDRLVNKLHLLKRLEVLNLKGNKLSNEGSWALSKFLALPSSASSLQRLDLSGLFLTPSGITLLAKSLATTTDESYRSTNGGHRRDKRHKCSGSPLQAEFSQSFLSIDTSASYSENCVGITPGMTTSLSSAYFSKNLEPQKPLLLRELTLAMNTIGDSGSDALCNLLESGDCQLLQSLDLRNTGIGLRGVLHLARGLARCPLLTMLSLSNNPLDVLYDNQVQSCSPDSVLHGTEEVGTGTNSVLSAPIDFSRKAWSALGRALPLSLRHLNLFNTTLNSMVMHRLVLNW 346
The following BLAST results are available for this feature:
BLAST of EWM28535.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110953|gb|EWM28535.1|0.000e+0100.00Leucine-rich repeat, ribonuclease inhibitor subtyp... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2113rna2113Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications