EWM28571.1, cds2092 (CDS) Nannochloropsis gaditana

Overview
NameEWM28571.1
Unique Namecds2092
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:882411..883643 -
Alignment locationCM002458.1:882224..882340 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28571.1
Product26s proteasome regulatory subunit n7
Orig transcript idgnl|cribi|Naga_100009g61.614.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:882411..883643 -
CM002458.1supercontigCM002458.1:882224..882340 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011991WHTH_DNA-bd_dom
IPR01958526S_proteasome_reg_su-Rpn7
IPR000717PCI_dom
Homology
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|585110989|gb|EWM28571.1| (26s proteasome regulatory subunit n7 [Nannochloropsis gaditana])

HSP 1 Score: 909.827 bits (2350), Expect = 0.000e+0
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0
Query:    1 MAVEDISSHTKPPALGNESSGLPEEEEERKAVPDMALAQDLHLLELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARLRAGLGRGKKHSISRDQGIHPNEHKRRVTVLYFTCALYL 449
            MAVEDISSHTKPPALGNESSGLPEEEEERKAVPDMALAQDLHLLELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARLRAGLGRGKKHSISRDQGIHPNEHKRRVTVLYFTCALYL
Sbjct:    1 MAVEDISSHTKPPALGNESSGLPEEEEERKAVPDMALAQDLHLLELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARLRAGLGRGKKHSISRDQGIHPNEHKRRVTVLYFTCALYL 449          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|299117119|emb|CBN73890.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 410.994 bits (1055), Expect = 7.362e-138
Identity = 209/384 (54.43%), Postives = 264/384 (68.75%), Query Frame = 0
Query:   29 RKAVPDMALAQDLHLLELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLG-WPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARL 411
            ++ VPDM LAQ    + + Q  P            +L  +K     P Y S+C +    +P+DAAL A++K  NEAE   I E L+ A E  GDMEVLDA     K +AR+G+K +AYAA + I  K KI TGK+IDA M K R+  F  DT   K  LE AKK+++ GGDWDRRNRLKVYEA+ LIT+R +K AA LLL+C++TFTC EL +Y  FI Y V+TN+L L RTTLKKK+VDGPEV+AV+ E P +  L+NSLYDC YR F  A+VE+  +L  DRY + H   LVRE+R+L Y+QFL++YKSV + +MA AFG+   FLD+ELSRFIAAGRL+AKIDKVGGVVET RPDSKNAQY   ++ GD LLNR+ KL R+
Sbjct:   37 KEMVPDMNLAQRC-WVAVHQQDP-------AAAASILDTVKERNMGPWYASLCHQHPSLFPLDAALAAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKASAYAAYETITEKAKIFTGKKIDAIMAKTRVAFFHLDTPQVKAGLEAAKKMIDLGGDWDRRNRLKVYEALHLITSRDIKGAATLLLECVSTFTCTELCSYNDFILYTVVTNILTLPRTTLKKKIVDGPEVLAVINEIPNISALVNSLYDCRYRDFMMAIVELNGQLENDRYFATHSTYLVRELRILAYTQFLDAYKSVVLGTMATAFGVGEPFLDKELSRFIAAGRLNAKIDKVGGVVETNRPDSKNAQYQACIKQGDLLLNRVQKLGRV 412          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|676379015|ref|XP_009032786.1| (hypothetical protein AURANDRAFT_19506 [Aureococcus anophagefferens] >gi|323457329|gb|EGB13195.1| hypothetical protein AURANDRAFT_19506 [Aureococcus anophagefferens])

HSP 1 Score: 402.519 bits (1033), Expect = 3.975e-135
Identity = 197/356 (55.34%), Postives = 257/356 (72.19%), Query Frame = 0
Query:   55 PDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLAR 410
            P+LE+    + A I+  +  P Y  VC  K GWPVDAAL   +KA N AELA +  +   A ++ GDMEVLDA+    KF AR+G K  AYAA D I  +PKISTGKRIDA M K+R+ LFF D  A KE L  AKK+ EDGGDWDR NRL VYE+V +I  RS++ AA  L+  +ATFTCVEL TY +F+FYAV+TNLL + R  LKKK++DGPEV+ ++++ P L  L+ SLY+C+Y  FF+ +  + P+L  DRY S H R LVRE+RVLVY+QFL++YK+V +ASMA+AFG+ VDFLD EL+RFI+ GRL+AK+DKV  VVET RPD K+ +Y ++++ GD LLNR+ +LAR
Sbjct:   16 PELEK---EIRATIEKGEMGPYYEHVCA-KFGWPVDAALLEGMKAKNAAELAALVAKKEDAEKNQGDMEVLDALFDAVKFHARVGAKAEAYAACDAIRDRPKISTGKRIDALMMKIRVSLFFVDVAACKEQLAEAKKMAEDGGDWDRNNRLSVYESVFMIINRSMEDAAAKLISGVATFTCVELCTYPEFVFYAVVTNLLSMSRPELKKKVIDGPEVLQIIKQIPHLTDLVTSLYECEYATFFRTVAAIEPQLLNDRYFSRHTRYLVRELRVLVYTQFLDAYKTVTLASMAEAFGVGVDFLDGELARFISCGRLNAKVDKVAMVVETNRPDYKSQKYQQIIKQGDILLNRIQQLAR 367          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|695457617|ref|XP_009537239.1| (hypothetical protein PHYSODRAFT_253936 [Phytophthora sojae] >gi|348667848|gb|EGZ07673.1| hypothetical protein PHYSODRAFT_253936 [Phytophthora sojae])

HSP 1 Score: 389.808 bits (1000), Expect = 2.034e-129
Identity = 199/420 (47.38%), Postives = 279/420 (66.43%), Query Frame = 0
Query:    1 MAVEDISSHTKP----PALGNESS--GLPEE-EEERKAVPDMALAQDLHLLELAQSKPDEV--PDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARL 411
            MA +D      P    P L  ++S   + EE E++   +P+M L+Q   LL    S    +  PD      +VL +I+     P Y  VC E   WPVDAAL+A++ A NE ELA+++E+L  A ++ GD+EVL+A++A+ + ++RIG++  A  A      KP+ S  ++I  A+  +R+GLFF D E  +  +++A  L+++GGDWDRRNRLKVYE   L+  R  KKA++L  + +ATFT  EL  Y   +FY VIT +L + R  LKKK+VD PE++AV+ E P L   LN LYDC+Y+ FF A+V++ P + RD+Y+S H R L RE+RVL Y QFLE+Y+SV +ASMA AFG+SV+FLD EL+RFIAAGRL+AKIDKV GV+ET RPD+KNAQY + ++ GD LLNR+ KLAR+
Sbjct:    1 MAADDAKKPADPAAKVPTLKKQASVGNISEEIEDDLSTLPNMKLSQLHFLLRHQHSGASTLGEPDAAAAKQQVLEIIQQSDMAPFYRLVCAE-FQWPVDAALEAQMSAKNEQELAQLDERLADAEQNLGDIEVLEALLAKARMYSRIGDEEKALEAFKVAGEKPQ-SINQKILVALHIIRIGLFFSDLELVETYIKKATALIDEGGDWDRRNRLKVYEGCYLLMARDFKKASKLFQESVATFTATELMPYNTMVFYCVITCVLSMSRVDLKKKIVDSPEILAVINEIPCLTDFLNGLYDCNYKRFFTAMVDIQPYILRDKYLSTHSRFLYRELRVLAYGQFLEAYRSVTIASMATAFGVSVEFLDNELARFIAAGRLNAKIDKVAGVIETNRPDAKNAQYQDAIKKGDLLLNRIQKLARV 418          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|566030627|gb|ETI53538.1| (hypothetical protein F443_03523 [Phytophthora parasitica P1569] >gi|567968271|gb|ETK93414.1| hypothetical protein L915_03405 [Phytophthora parasitica] >gi|568025934|gb|ETL99935.1| hypothetical protein L917_03284 [Phytophthora parasitica] >gi|570958369|gb|ETP23348.1| hypothetical protein F441_03517 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 385.956 bits (990), Expect = 5.530e-128
Identity = 202/418 (48.33%), Postives = 278/418 (66.51%), Query Frame = 0
Query:    1 MAVEDISSHTKP--PALGNESS--GLPEE-EEERKAVPDMALAQDLHLLELAQSKPDEV-PDLEEVTN-RVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARL 411
            MA +D     KP  PAL  ++S   + EE E++   +P+M L+Q   LL+   S    + P+       +VL +IK     P Y  VC E   WPVDAAL+ ++   N  ELA ++E+L  A ++ GD+EVL+A++A+ + ++RIG+K  A  A      KP+ S  ++I  A+  +R+GLFF D E  +  +++A  L+++GGDWDRRNRLKVYE   L+  R  KKA+ L  + +ATFT  EL  Y   +FY VIT +L + R  LKKK+VD PE++AV+ E P L   LN LYDCDY+ FF A+VE+ P L RD+Y+S H R L RE+RVL Y+QFLE+Y+SV +ASMA AFG+SV+FLD EL+RFIAAGRL+AKIDKV GV+ET RPD+KNAQY + ++ GD LLNR+ KLAR+
Sbjct:    1 MAADDAK---KPAVPALKKQASVGNISEEIEDDLSTLPNMKLSQLHFLLQHQHSSASTLTPEAAAAAQTQVLEIIKQNDMAPFYRLVCSE-FNWPVDAALEGDMANKNATELAALDERLADAEQNLGDIEVLEALLAKARMYSRIGDKEKALEAFKVAGEKPQ-SINQKILVALHVIRIGLFFSDLELVETYIKKATALIDEGGDWDRRNRLKVYEGCYLLMARDFKKASTLFQESVATFTATELMPYNTMVFYCVITCVLSMSRVDLKKKIVDSPEILAVINEIPCLTDFLNGLYDCDYKKFFTAMVEIQPYLLRDKYLSTHSRFLYRELRVLAYAQFLEAYRSVTIASMAAAFGVSVEFLDTELARFIAAGRLNAKIDKVAGVIETNRPDAKNAQYQDAIKKGDLLLNRIQKLARV 413          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|675183635|ref|XP_008900702.1| (hypothetical protein PPTG_08378 [Phytophthora parasitica INRA-310] >gi|567996721|gb|ETL46823.1| hypothetical protein L916_03358 [Phytophthora parasitica] >gi|568056403|gb|ETM53115.1| hypothetical protein L914_03383 [Phytophthora parasitica] >gi|568098904|gb|ETN13622.1| hypothetical protein PPTG_08378 [Phytophthora parasitica INRA-310] >gi|570334274|gb|ETO82222.1| hypothetical protein F444_03591 [Phytophthora parasitica P1976] >gi|970628974|gb|KUF76390.1| 26S proteasome non-ATPase regulatory subunit 6 [Phytophthora nicotianae] >gi|970654406|gb|KUF92720.1| hypothetical protein AM588_10007249 [Phytophthora nicotianae])

HSP 1 Score: 384.8 bits (987), Expect = 1.378e-127
Identity = 201/418 (48.09%), Postives = 278/418 (66.51%), Query Frame = 0
Query:    1 MAVEDISSHTKP--PALGNESS--GLPEE-EEERKAVPDMALAQDLHLLELAQSKPDEV-PDLEEVTN-RVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARL 411
            MA +D     KP  PAL  ++S   + EE E++   +P+M L+Q   LL+   S    + P+       +VL +IK     P Y  VC E   WPVDAAL+ ++   N  ELA ++E+L  A ++ GD+EVL+A++A+ + ++RIG+K  A  A      KP+ S  ++I  A+  +R+GLFF D E  +  +++A  L+++GGDWDRRNRLKVYE   L+  R  KKA+ L  + +ATFT  EL  Y   +FY VIT +L + R  LKKK+VD PE++AV+ E P L   LN LYDCDY+ FF A+VE+ P + RD+Y+S H R L RE+RVL Y+QFLE+Y+SV +ASMA AFG+SV+FLD EL+RFIAAGRL+AKIDKV GV+ET RPD+KNAQY + ++ GD LLNR+ KLAR+
Sbjct:    1 MAADDAK---KPAVPALKKQASVGNISEEIEDDLSTLPNMKLSQLHFLLQHQHSSASTLTPEAAAAAQTQVLEIIKQNDMAPFYRLVCSE-FNWPVDAALEGDMANKNATELAALDERLADAEQNLGDIEVLEALLAKARMYSRIGDKEKALEAFKVAGEKPQ-SINQKILVALHVIRIGLFFSDLELVETYIKKATALIDEGGDWDRRNRLKVYEGCYLLMARDFKKASTLFQESVATFTATELMPYNTMVFYCVITCVLSMSRVDLKKKIVDSPEILAVINEIPCLTDFLNGLYDCDYKKFFTAMVEIQPYILRDKYLSTHSRFLYRELRVLAYAQFLEAYRSVTIASMAAAFGVSVEFLDTELARFIAAGRLNAKIDKVAGVIETNRPDAKNAQYQDAIKKGDLLLNRIQKLARV 413          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|570994147|gb|ETP51339.1| (hypothetical protein F442_03505 [Phytophthora parasitica P10297])

HSP 1 Score: 384.03 bits (985), Expect = 3.081e-127
Identity = 202/418 (48.33%), Postives = 277/418 (66.27%), Query Frame = 0
Query:    1 MAVEDISSHTKP--PALGNESS--GLPEE-EEERKAVPDMALAQDLHLLELAQSKPDEV-PDLEEVTN-RVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARL 411
            MA +D     KP  PAL  ++S   + EE E++   +P+M L+Q   LL+   S    + P+       +VL  IK     P Y  VC E   WPVDAAL+ ++   N  ELA ++E+L  A ++ GD+EVL+A++A+ + ++RIG+K  A  A      KP+ S  ++I  A+  +R+GLFF D E  +  +++A  L+++GGDWDRRNRLKVYE   L+  R  KKA+ L  + +ATFT  EL  Y   +FY VIT +L + R  LKKK+VD PE++AV+ E P L   LN LYDCDY+ FF A+VE+ P L RD+Y+S H R L RE+RVL Y+QFLE+Y+SV +ASMA AFG+SV+FLD EL+RFIAAGRL+AKIDKV GV+ET RPD+KNAQY + ++ GD LLNR+ KLAR+
Sbjct:    1 MAADDAK---KPAVPALKKQASVGNISEEIEDDLSTLPNMKLSQLHFLLQHQHSSASTLTPEAAAAAQTQVLESIKQNDMAPFYRLVCSE-FNWPVDAALEGDMANKNATELAALDERLADAEQNLGDIEVLEALLAKARMYSRIGDKEKALEAFKVAGEKPQ-SINQKILVALHVIRIGLFFSDLELVETYIKKATALIDEGGDWDRRNRLKVYEGCYLLMARDFKKASTLFQESVATFTATELMPYNTMVFYCVITCVLSMSRVDLKKKIVDSPEILAVINEIPCLTDFLNGLYDCDYKKFFTAMVEIQPYLLRDKYLSTHSRFLYRELRVLAYAQFLEAYRSVTIASMAAAFGVSVEFLDTELARFIAAGRLNAKIDKVAGVIETNRPDAKNAQYQDAIKKGDLLLNRIQKLARV 413          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|953489671|emb|CEG47037.1| (26s proteasome non-atpase regulatory subunit 6 [Plasmopara halstedii])

HSP 1 Score: 382.874 bits (982), Expect = 6.515e-127
Identity = 193/408 (47.30%), Postives = 274/408 (67.16%), Query Frame = 0
Query:    7 SSHTKPPALGNESSGLPEEEEERKAVPDMALAQDLHLL---ELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARL 411
            S+ TK  ++GN S    E E++   +PDM L+Q LH L       S    V        +VL ++K     P Y  VC E   WP+D+AL+ ++++ N  E+  ++E+L  A ++ GD+EVL+A++A+ + ++RIG+K  A  A      KP+ S  ++I  A+  +R+GLFF D E  +  +++A  L+++GGDWDRRNRLKVYE   L+  R+ K+A+ L  + +ATFT  EL  Y+  +FY VIT +L + R  LKKK+VD PE++AV+ E P L   LN LYDCDYR FF A+V++ P + RD+Y+S H R L RE+RVL Y+QFLE+Y+SV +ASMA AFG+SV+FLD EL+RFIAAGRL+AKIDKV GV+ET RPD+KNAQY + ++ GD LLNR+ KLAR+
Sbjct:    9 SALTKQASVGNISE---EIEDDLNTLPDMKLSQ-LHFLLQHHHTTSSTLTVDAAAAAQTQVLELVKQNDMAPFYRLVCSE-FNWPIDSALEGKMRSKNAEEMIALDERLADAEQNLGDIEVLEALLAKARMYSRIGDKEKALEAFKVAGEKPQ-SINQKILVALHIIRIGLFFSDLELVETYIKKATALIDEGGDWDRRNRLKVYEGCYLLMARNFKRASLLFQESVATFTATELMPYKTMVFYCVITCVLSMSRVDLKKKIVDSPEILAVIDEIPYLTNFLNGLYDCDYRNFFTAMVDIQPYILRDKYLSTHSRFLYRELRVLAYAQFLEAYRSVTIASMASAFGVSVEFLDSELARFIAAGRLNAKIDKVAGVIETNRPDAKNAQYQDAIKKGDLLLNRIQKLARV 410          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|325185327|emb|CCA19814.1| (26S proteasome nonATPase regulatory subunit 6 putat [Albugo laibachii Nc14])

HSP 1 Score: 381.719 bits (979), Expect = 2.202e-126
Identity = 199/412 (48.30%), Postives = 272/412 (66.02%), Query Frame = 0
Query:    4 EDISSHTKPPALGNESSGLPEEEEERKAVPDMALAQDLHLLELAQSKPDEVPDLEEVT--NRVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAA---YAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLAR 410
            +D +  +K    GN S    E EE   ++P M +A+  +LL   QS    + D  + T  N ++  IK+ K  P Y  VC  +L WP+DA L A LK  N+ E  +++E++  AT++ GD+EVL+ ++A+ +   RIG+K AA   +A A+E   KP+ S  ++I  ++  +R+GLFF D E  KE + +A  L+++GGDWDRRNRLKVYE   L+  R  KKA  L  +  ATFT  EL  Y+Q +FY V+T +L + R  LKKK+VD PE++AVL   P L   LN LYDC+Y+ FF A+VE+ P + RD+Y+S H R ++RE RVL YSQFLE+Y+SV + SMA+AFGISV FLD ELSRFIAAGRL+AKIDKV GV+ET RPDSKNAQY   ++ GD +LNR+ KL R
Sbjct:    8 DDKAKSSKQQTAGNLSE---EIEEGLGSLPIMRIAEVFYLLSHQQSLQSTL-DKGDATYRNELMQYIKSNKMAPYYKYVC-NQLHWPIDAELLANLKKENKDEAVQLDEKIEDATKNLGDIEVLETLLAKARMHCRIGDKEAAIQAFAVANE---KPQ-SINQKILVSLHCIRIGLFFNDLELVKERIRQATLLIDEGGDWDRRNRLKVYEGCYLMMARDFKKACVLFQESAATFTATELMNYDQLVFYCVVTCVLSMNRVELKKKIVDSPEILAVLHHTPYLENFLNGLYDCNYKVFFTAMVELYPHILRDKYLSIHSRYIIREYRVLAYSQFLEAYRSVTMESMANAFGISVTFLDAELSRFIAAGRLNAKIDKVNGVIETNRPDSKNAQYQAAIKKGDVVLNRIQKLTR 410          
BLAST of EWM28571.1 vs. NCBI_GenBank
Match: gi|301110042|ref|XP_002904101.1| (26S proteasome non-ATPase regulatory subunit 6 [Phytophthora infestans T30-4] >gi|262096227|gb|EEY54279.1| 26S proteasome non-ATPase regulatory subunit 6 [Phytophthora infestans T30-4])

HSP 1 Score: 379.793 bits (974), Expect = 1.414e-125
Identity = 196/416 (47.12%), Postives = 276/416 (66.35%), Query Frame = 0
Query:    1 MAVEDISSHTKPPALGNESS--GLPEE-EEERKAVPDMALAQDLHLLELAQSKPDEV-PDLEEVTN-RVLAVIKAEKAEPLYTSVCVEKLGWPVDAALQAELKASNEAELAEIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTTLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGVVETRRPDSKNAQYLEVVRDGDALLNRLSKLARL 411
            MA +D    T  PAL  ++S   + EE E++   +P+M L+Q   LL+   S    + P+       +VL ++K     P Y  +   +  WPVD+ L+AE+   N  ELA ++E+L  A ++ GD+EVL+AM+A+ + ++RIG+K  A  A      KP+ S  ++I  A+  +R+GLFF D E  +  +++A  L+++GGDWDRRNRLKVYE   L+  R  KKA+ L  + +ATFT  EL  Y   +FY VIT +L + R  LKKK+VD PE++AV+ E P L   LN LYDCDY+ FF A+V++ P + RD+Y+S H R L RE+RVL Y+QFLE+Y+SV +ASMA AFG+SV+FLD EL+RFIAAGRL+AKIDKV GV+ET RPD+KNAQY + ++ GD LLNR+ KLAR+
Sbjct:    1 MAADDAKKST-VPALKKQASVGNISEEIEDDLSTLPNMKLSQLHFLLQHKHSSASTLTPEAAAAAQTQVLELVKQNDMAPFY-HIVYNEFKWPVDSVLEAEMSNKNATELAALDERLADAEQNLGDIEVLEAMLAKARMYSRIGDKEKALEAFKVAGEKPQ-SINQKILVALHVIRIGLFFSDLELVETYIKKAAALIDEGGDWDRRNRLKVYEGCYLLMARDFKKASTLFQESVATFTATELMPYNTMVFYCVITCVLSMSRVDLKKKIVDSPEILAVINEIPCLTDFLNGLYDCDYKKFFTAMVDIQPYILRDKYLSTHSRFLYRELRVLAYAQFLEAYRSVTIASMAAAFGVSVEFLDTELARFIAAGRLNAKIDKVAGVIETNRPDAKNAQYQDAIKKGDLLLNRIQKLARV 413          
The following BLAST results are available for this feature:
BLAST of EWM28571.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110989|gb|EWM28571.1|0.000e+0100.0026s proteasome regulatory subunit n7 [Nannochlorop... [more]
gi|299117119|emb|CBN73890.1|7.362e-13854.43conserved unknown protein [Ectocarpus siliculosus][more]
gi|676379015|ref|XP_009032786.1|3.975e-13555.34hypothetical protein AURANDRAFT_19506 [Aureococcus... [more]
gi|695457617|ref|XP_009537239.1|2.034e-12947.38hypothetical protein PHYSODRAFT_253936 [Phytophtho... [more]
gi|566030627|gb|ETI53538.1|5.530e-12848.33hypothetical protein F443_03523 [Phytophthora para... [more]
gi|675183635|ref|XP_008900702.1|1.378e-12748.09hypothetical protein PPTG_08378 [Phytophthora para... [more]
gi|570994147|gb|ETP51339.1|3.081e-12748.33hypothetical protein F442_03505 [Phytophthora para... [more]
gi|953489671|emb|CEG47037.1|6.515e-12747.3026s proteasome non-atpase regulatory subunit 6 [Pl... [more]
gi|325185327|emb|CCA19814.1|2.202e-12648.3026S proteasome nonATPase regulatory subunit 6 puta... [more]
gi|301110042|ref|XP_002904101.1|1.414e-12547.1226S proteasome non-ATPase regulatory subunit 6 [Ph... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2100rna2100Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications