EWM28551.1, cds2088 (CDS) Nannochloropsis gaditana

Overview
NameEWM28551.1
Unique Namecds2088
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:878811..878816 -
Alignment locationCM002458.1:878635..878748 -
Alignment locationCM002458.1:878203..878565 -

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Properties
Property NameValue
Protein idEWM28551.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g64.594.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:878811..878816 -
CM002458.1supercontigCM002458.1:878635..878748 -
CM002458.1supercontigCM002458.1:878203..878565 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28551.1 vs. NCBI_GenBank
Match: gi|585110969|gb|EWM28551.1| (hypothetical protein Naga_100009g64 [Nannochloropsis gaditana])

HSP 1 Score: 326.25 bits (835), Expect = 5.898e-113
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 
Query:    1 MDPHKSNQEQHKGGCTHVSTCFSLVYLGTFGWIRGCVGGWDCVACLTTEVGTRSVSNVGQRACVCGKGCRGGSRLRSRLFRGRVGGSCLEVCLQGSEGKKTEIKGGEIWRMDGRNHQPRSNPHNGWGESTNTVQRHGHPGRMLFIVRFFLSPLSLSDPFC 160
            MDPHKSNQEQHKGGCTHVSTCFSLVYLGTFGWIRGCVGGWDCVACLTTEVGTRSVSNVGQRACVCGKGCRGGSRLRSRLFRGRVGGSCLEVCLQGSEGKKTEIKGGEIWRMDGRNHQPRSNPHNGWGESTNTVQRHGHPGRMLFIVRFFLSPLSLSDPFC
Sbjct:    1 MDPHKSNQEQHKGGCTHVSTCFSLVYLGTFGWIRGCVGGWDCVACLTTEVGTRSVSNVGQRACVCGKGCRGGSRLRSRLFRGRVGGSCLEVCLQGSEGKKTEIKGGEIWRMDGRNHQPRSNPHNGWGESTNTVQRHGHPGRMLFIVRFFLSPLSLSDPFC 160
The following BLAST results are available for this feature:
BLAST of EWM28551.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110969|gb|EWM28551.1|5.898e-113100.00hypothetical protein Naga_100009g64 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2096rna2096Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications