EWM30525.1, cds208 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|585113189|gb|EWM30525.1| (haloacid dehalogenase-like hydrolase domain containing 3 [Nannochloropsis gaditana]) HSP 1 Score: 803.512 bits (2074), Expect = 0.000e+0 Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query: 1 MACTERDGRRMRRRVAGSGAVLLAYMVGISSAFILSPAKFSGSSTTTTRWSNRRRCVVPNPSTSPTSLQASAFENLGMPPIRPRGSRDQKLEEEAEESTLAGEAVEAPPVRPVPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDLEAVLTMFDKSDPDRLISTTDKNKNRQGHLRVQY 389
MACTERDGRRMRRRVAGSGAVLLAYMVGISSAFILSPAKFSGSSTTTTRWSNRRRCVVPNPSTSPTSLQASAFENLGMPPIRPRGSRDQKLEEEAEESTLAGEAVEAPPVRPVPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDLEAVLTMFDKSDPDRLISTTDKNKNRQGHLRVQY
Sbjct: 1 MACTERDGRRMRRRVAGSGAVLLAYMVGISSAFILSPAKFSGSSTTTTRWSNRRRCVVPNPSTSPTSLQASAFENLGMPPIRPRGSRDQKLEEEAEESTLAGEAVEAPPVRPVPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDLEAVLTMFDKSDPDRLISTTDKNKNRQGHLRVQY 389
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|299471648|emb|CBN76870.1| (haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus]) HSP 1 Score: 137.502 bits (345), Expect = 4.031e-33 Identity = 80/224 (35.71%), Postives = 129/224 (57.59%), Query Frame = 0
Query: 114 PELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDV---GFPKED--LDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWR-MQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
PEL+T +A+G+L +GL RE + ++Y R+P P F F ++++ P +GA MS+ +WW +F +L + ED LD++ + +ELYYE A+E + V ++D+L WR +GGPKL V+ D D+RL +LENL +L YFD V++SRE+G + + +A+E AGVK KK +H+G ++ D+ G+ GM+++ V
Sbjct: 105 PELVTFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKI-DELVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKRAKKGLHVGCKYETDITGSCETGMEAVSV 327
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|260793048|ref|XP_002591525.1| (hypothetical protein BRAFLDRAFT_131048 [Branchiostoma floridae] >gi|229276732|gb|EEN47536.1| hypothetical protein BRAFLDRAFT_131048 [Branchiostoma floridae]) HSP 1 Score: 122.094 bits (305), Expect = 9.344e-29 Identity = 83/254 (32.68%), Postives = 120/254 (47.24%), Query Frame = 0
Query: 114 PELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKE-DLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDLEAVLTMFDKS 366
P+L+T++ L + G + V H KV + AF K Y + Y NFG +G+S + WW + KTFLD G PK LD V +FEE WE V P + E G KLGVI ++DERL +L LD+ H FD V++S ++ KPD + F LA++ AG P +HLG N DV A GM ++W+ + D P + +F + +++ V+ KS
Sbjct: 5 PKLLTLDCTNTLFKLKSTSGTIYAAVADSH-GIKVD---STKLDSAFLKNYKEQSQSYSNFGCMSGISTKVWWTDLVKKTFLDSGVPKSPALDAVAKQLFEEF-----NGGKHWE----VYPQTKEALEAIRDKGVKLGVISNFDERLPKVLSELDLCHLFDFVLTSVDAQVAKPDCQIFQLALQLAGNVQPSHAVHLGDNLRLDVKPALRVGMHAIWINRNNVDV--PPELLECDKFHVVSNIKEVVKCIKKS 243
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|511009916|gb|EPB91148.1| (hypothetical protein HMPREF1544_02028 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 119.783 bits (299), Expect = 1.541e-27 Identity = 68/217 (31.34%), Postives = 118/217 (54.38%), Query Frame = 0
Query: 115 ELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
+LIT +A+ L +P + + E K + +R+ R E+ F +AY + ++ P +G GM+ + WW + Y TF+ G ++DLD F ++ LY T+E A+ DVL + +L+ Q G ++GVI + DER++ ++ENL++ YFD V++S KP R + A+E AG + + +H+G + D D GA AG +++ +
Sbjct: 8 KLITFDAYNTLFKPKGSLSAQYVEEAKK---FGIRVTR-EQINQHFGQAYKKQLTKAPFYGISKGMTPQSWWKELVYSTFISAGIKEKDLDRNFDQLYNALYTRFTTAE-AYSLFPDVLSTLAELK----QHGFQMGVISNSDERVVKVIENLNLNKYFDFVIASSLVECEKPSKRIYEKALEIAGNVNAEHALHVGDDVDKDYFGATKAGWNAVLL 215
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|1026273340|gb|OAD06347.1| (hypothetical protein MUCCIDRAFT_106918 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 119.398 bits (298), Expect = 1.944e-27 Identity = 68/217 (31.34%), Postives = 118/217 (54.38%), Query Frame = 0
Query: 115 ELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
+LIT +A+ L +P + + E K + +R+ R E+ F +AY + ++ P +G GM+ + WW + Y TF+ G ++DLD F ++ LY T+E A+ DVL +++L+ Q G ++GVI + DER++ ++ENL++ YFD V++S KP R + A+E AG + +H+G + D D GA AG +++ +
Sbjct: 8 KLITFDAYNTLFKPKGSLSAQYVEEAKK---FGIRVTR-EQINQHFGQAYKKQLTKAPFYGISKGMTPQGWWKELVYSTFISAGITEKDLDRNFDQLYNALYTRFTTAE-AYAVFPDVLSTLNELK----QHGFQMGVISNSDERVVKVIENLNLNKYFDFVIASSLVECEKPSKRIYEKALEIAGNVKAEHALHVGDDVDKDYFGATKAGWNAVLL 215
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|1021065108|emb|SAL98783.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 118.627 bits (296), Expect = 4.425e-27 Identity = 74/218 (33.94%), Postives = 115/218 (52.75%), Query Frame = 0
Query: 116 LITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLP-RPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAG-VKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
LIT +A+ L +P + + H KV L PE T F AY + P +G GM++EEWW + Y TFL+ G PK+DLD F +F LY +T E + DV+ +D+LQ + G K+GVI + DERL++++E+L++ YFD ++ S +G KP F A++ G V + +H+G + + D GA A +S+ +
Sbjct: 10 LITFDAYNTLFKPKGSLSAQY-----AHEASKVGLQVAPESITKHFGLAYKKQLLRSPFYGVGQGMTSEEWWKELVYDTFLEAGVPKQDLDSKFSSLFPSLYTRFMTKE-GYTIFPDVVSTLDELQ----RRGFKMGVISNSDERLLSVMESLNLEKYFDFILPSCLAGYEKPKVEIFQKAIQLTGEVIHTDEALHVGDDVEKDYFGALNANWNSVLL 217
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|758356594|dbj|GAN01465.1| (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Mucor ambiguus]) HSP 1 Score: 117.087 bits (292), Expect = 1.252e-26 Identity = 67/217 (30.88%), Postives = 118/217 (54.38%), Query Frame = 0
Query: 115 ELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
+LIT +A+ L +P + + E K + +R+ R ++ F +AY + ++ P +G GM+ + WW + Y TF+ G ++DLD F ++ LY T+E A+ DVL +++L+ Q G ++GVI + DER++ ++ENL++ YFD V++S KP R + A+E AG + +H+G + D D GA AG +++ +
Sbjct: 8 KLITFDAYNTLFKPKGSLSAQYVEEAKK---FGIRVTR-DQINQHFGQAYKKQLTKAPFYGISKGMTPKSWWKELVYSTFISAGIKEKDLDRNFDQLYNALYTRFTTAE-AYSIFPDVLSSLNELK----QHGFQMGVISNSDERVVKVIENLNLNKYFDFVIASSLVECEKPSRRIYEKALEVAGNVRAEHALHVGDDVDKDYFGATKAGWNAVLL 215
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|1043303728|gb|OBZ88477.1| (Haloacid dehalogenase-like hydrolase domain-containing protein 3 [Choanephora cucurbitarum]) HSP 1 Score: 116.316 bits (290), Expect = 1.877e-26 Identity = 66/210 (31.43%), Postives = 117/210 (55.71%), Query Frame = 0
Query: 116 LITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAG 325
LIT +A+ L +P + + E K + +R+ R E+ F +AY + ++ P +G GM+ + WW + Y TF++ G +DLD F +++ LY T+E A+ DVL +D+L++ G ++GVI + DER++ ++E+L++ YFD V++S G KP + A+++AG P++ +H+G + + D GA AG
Sbjct: 7 LITFDAYNTLFKPKGSLSAQYVEEASK---FGIRVTR-EQINHHFGQAYKQQLTKAPFYGLSKGMTPQGWWKELVYSTFMNAGVKAKDLDSSFDPLYDALYARFTTAE-AYSIFPDVLDTLDQLKKL----GYQMGVISNSDERVVKVIESLNLNKYFDFVLASALVGHEKPSKIIYQEALKQAGHLKPEQALHVGDDIEKDYFGATKAG 207
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|873236348|emb|CEL99231.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 115.546 bits (288), Expect = 8.975e-26 Identity = 87/298 (29.19%), Postives = 129/298 (43.29%), Query Frame = 0
Query: 112 PVPELITMNAFGLLIEPTDEVG----LFFREVFMKHYDYKVRLPR--PERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDE-------VFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGG----PKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKA----------------------GVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQV--EFTKIGDLEAVLTMFDKSDP 368
P P L+T++ G L P VG L RE + ++ L + T AF KAY A+ +E+P FGA +S+ EWW + T++ G L F VF +LYY+ E W + + ++ L WR G P +GVI ++DER L +L YFD V+ SRE G KP P+ F A+E+A GV D +H+G +F+ D+VGA AG V+ + +P+ + F + LE + +F P
Sbjct: 20 PRPSLVTLDVTGTLFTPRIPVGESYLLALREHLPEGSGWERHLEELDADALTTAFMKAYKAKSAEHPAFGAATNLSSVEWWRDVVRHTYIHGGVDPALLQHEDGGSSGYFDRVFADLYYDVFVGERGWALLPNTHEVLQALSSWRGSLGADERPVMGVISNFDERATEALARFGLLQYFDFVLLSREQGVEKPHPQIFQSAVEEARRVRQQWTKEGEPASPSSSSCVGV-DRTTHVHIGDSFERDIVGATQAGWSG---VLVNNKGRQPKSDTNSAVNNFVSVNSLEDIPALFGLPTP 313
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|727135794|emb|CEG81189.1| (hypothetical protein RMATCC62417_15417 [Rhizopus microsporus]) HSP 1 Score: 114.005 bits (284), Expect = 1.378e-25 Identity = 71/226 (31.42%), Postives = 118/226 (52.21%), Query Frame = 0
Query: 113 VPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDY 338
V +LIT +A+ L +P + + E K Y +++ + + T F +AY ++ + P +G K GM+ +EWW + Y TF G ++LD F ++ LY T+ A+ DV+ +D+L+ G K+GVI + DER+ ++ENL + YFD V++S + G KPD F A++ AG + +H+G + + D GAA AG S+ + Y
Sbjct: 5 VIKLITFDAYNTLFKPRGSLSAQYVEEAAK---YGIKVTK-NQITDHFGQAYRKQQLKAPFYGIKQGMTPQEWWKELVYATFSSAGVHPKELDTSFDQLYNALY-NRFTTAAAYSIFPDVVSTLDELK----TRGFKMGVITNSDERVAKVVENLKLDKYFDFVLASADVGYEKPDKVIFDRALKIAGNVSAENALHVGDDLNKDYFGAAYAGWHSVLLARSKLSY 221 The following BLAST results are available for this feature:
BLAST of EWM30525.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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