EWM30525.1, cds208 (CDS) Nannochloropsis gaditana

Overview
NameEWM30525.1
Unique Namecds208
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:534971..535051 +
Alignment locationCM002455.1:535516..536604 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30525.1
Producthaloacid dehalogenase-like hydrolase domain containing 3
Orig transcript idgnl|cribi|Naga_100013g7.9813.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:534971..535051 +
CM002455.1supercontigCM002455.1:535516..536604 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR006439HAD-SF_hydro_IA
IPR023214HAD-like_dom
Homology
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|585113189|gb|EWM30525.1| (haloacid dehalogenase-like hydrolase domain containing 3 [Nannochloropsis gaditana])

HSP 1 Score: 803.512 bits (2074), Expect = 0.000e+0
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query:    1 MACTERDGRRMRRRVAGSGAVLLAYMVGISSAFILSPAKFSGSSTTTTRWSNRRRCVVPNPSTSPTSLQASAFENLGMPPIRPRGSRDQKLEEEAEESTLAGEAVEAPPVRPVPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDLEAVLTMFDKSDPDRLISTTDKNKNRQGHLRVQY 389
            MACTERDGRRMRRRVAGSGAVLLAYMVGISSAFILSPAKFSGSSTTTTRWSNRRRCVVPNPSTSPTSLQASAFENLGMPPIRPRGSRDQKLEEEAEESTLAGEAVEAPPVRPVPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDLEAVLTMFDKSDPDRLISTTDKNKNRQGHLRVQY
Sbjct:    1 MACTERDGRRMRRRVAGSGAVLLAYMVGISSAFILSPAKFSGSSTTTTRWSNRRRCVVPNPSTSPTSLQASAFENLGMPPIRPRGSRDQKLEEEAEESTLAGEAVEAPPVRPVPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDLEAVLTMFDKSDPDRLISTTDKNKNRQGHLRVQY 389          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|299471648|emb|CBN76870.1| (haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus])

HSP 1 Score: 137.502 bits (345), Expect = 4.031e-33
Identity = 80/224 (35.71%), Postives = 129/224 (57.59%), Query Frame = 0
Query:  114 PELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDV---GFPKED--LDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWR-MQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
            PEL+T +A+G+L      +GL  RE   + ++Y  R+P P  F   F ++++      P +GA   MS+ +WW  +F   +L      +  ED  LD++   + +ELYYE      A+E +  V  ++D+L  WR  +GGPKL V+ D D+RL  +LENL +L YFD V++SRE+G    +   + +A+E AGVK  KK +H+G  ++ D+ G+   GM+++ V
Sbjct:  105 PELVTFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKI-DELVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKRAKKGLHVGCKYETDITGSCETGMEAVSV 327          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|260793048|ref|XP_002591525.1| (hypothetical protein BRAFLDRAFT_131048 [Branchiostoma floridae] >gi|229276732|gb|EEN47536.1| hypothetical protein BRAFLDRAFT_131048 [Branchiostoma floridae])

HSP 1 Score: 122.094 bits (305), Expect = 9.344e-29
Identity = 83/254 (32.68%), Postives = 120/254 (47.24%), Query Frame = 0
Query:  114 PELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKE-DLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDLEAVLTMFDKS 366
            P+L+T++    L +     G  +  V   H   KV      +   AF K Y  +   Y NFG  +G+S + WW  +  KTFLD G PK   LD V   +FEE           WE    V P   +  E     G KLGVI ++DERL  +L  LD+ H FD V++S ++   KPD + F LA++ AG   P   +HLG N   DV  A   GM ++W+   + D   P +     +F  + +++ V+    KS
Sbjct:    5 PKLLTLDCTNTLFKLKSTSGTIYAAVADSH-GIKVD---STKLDSAFLKNYKEQSQSYSNFGCMSGISTKVWWTDLVKKTFLDSGVPKSPALDAVAKQLFEEF-----NGGKHWE----VYPQTKEALEAIRDKGVKLGVISNFDERLPKVLSELDLCHLFDFVLTSVDAQVAKPDCQIFQLALQLAGNVQPSHAVHLGDNLRLDVKPALRVGMHAIWINRNNVDV--PPELLECDKFHVVSNIKEVVKCIKKS 243          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|511009916|gb|EPB91148.1| (hypothetical protein HMPREF1544_02028 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 119.783 bits (299), Expect = 1.541e-27
Identity = 68/217 (31.34%), Postives = 118/217 (54.38%), Query Frame = 0
Query:  115 ELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
            +LIT +A+  L +P   +   + E   K   + +R+ R E+    F +AY  + ++ P +G   GM+ + WW  + Y TF+  G  ++DLD  F  ++  LY    T+E A+    DVL  + +L+    Q G ++GVI + DER++ ++ENL++  YFD V++S      KP  R +  A+E AG  + +  +H+G + D D  GA  AG +++ +
Sbjct:    8 KLITFDAYNTLFKPKGSLSAQYVEEAKK---FGIRVTR-EQINQHFGQAYKKQLTKAPFYGISKGMTPQSWWKELVYSTFISAGIKEKDLDRNFDQLYNALYTRFTTAE-AYSLFPDVLSTLAELK----QHGFQMGVISNSDERVVKVIENLNLNKYFDFVIASSLVECEKPSKRIYEKALEIAGNVNAEHALHVGDDVDKDYFGATKAGWNAVLL 215          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|1026273340|gb|OAD06347.1| (hypothetical protein MUCCIDRAFT_106918 [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 119.398 bits (298), Expect = 1.944e-27
Identity = 68/217 (31.34%), Postives = 118/217 (54.38%), Query Frame = 0
Query:  115 ELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
            +LIT +A+  L +P   +   + E   K   + +R+ R E+    F +AY  + ++ P +G   GM+ + WW  + Y TF+  G  ++DLD  F  ++  LY    T+E A+    DVL  +++L+    Q G ++GVI + DER++ ++ENL++  YFD V++S      KP  R +  A+E AG    +  +H+G + D D  GA  AG +++ +
Sbjct:    8 KLITFDAYNTLFKPKGSLSAQYVEEAKK---FGIRVTR-EQINQHFGQAYKKQLTKAPFYGISKGMTPQGWWKELVYSTFISAGITEKDLDRNFDQLYNALYTRFTTAE-AYAVFPDVLSTLNELK----QHGFQMGVISNSDERVVKVIENLNLNKYFDFVIASSLVECEKPSKRIYEKALEIAGNVKAEHALHVGDDVDKDYFGATKAGWNAVLL 215          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|1021065108|emb|SAL98783.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 118.627 bits (296), Expect = 4.425e-27
Identity = 74/218 (33.94%), Postives = 115/218 (52.75%), Query Frame = 0
Query:  116 LITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLP-RPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAG-VKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
            LIT +A+  L +P   +   +      H   KV L   PE  T  F  AY  +    P +G   GM++EEWW  + Y TFL+ G PK+DLD  F  +F  LY   +T E  +    DV+  +D+LQ    + G K+GVI + DERL++++E+L++  YFD ++ S  +G  KP    F  A++  G V    + +H+G + + D  GA  A  +S+ +
Sbjct:   10 LITFDAYNTLFKPKGSLSAQY-----AHEASKVGLQVAPESITKHFGLAYKKQLLRSPFYGVGQGMTSEEWWKELVYDTFLEAGVPKQDLDSKFSSLFPSLYTRFMTKE-GYTIFPDVVSTLDELQ----RRGFKMGVISNSDERLLSVMESLNLEKYFDFILPSCLAGYEKPKVEIFQKAIQLTGEVIHTDEALHVGDDVEKDYFGALNANWNSVLL 217          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|758356594|dbj|GAN01465.1| (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Mucor ambiguus])

HSP 1 Score: 117.087 bits (292), Expect = 1.252e-26
Identity = 67/217 (30.88%), Postives = 118/217 (54.38%), Query Frame = 0
Query:  115 ELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWV 331
            +LIT +A+  L +P   +   + E   K   + +R+ R ++    F +AY  + ++ P +G   GM+ + WW  + Y TF+  G  ++DLD  F  ++  LY    T+E A+    DVL  +++L+    Q G ++GVI + DER++ ++ENL++  YFD V++S      KP  R +  A+E AG    +  +H+G + D D  GA  AG +++ +
Sbjct:    8 KLITFDAYNTLFKPKGSLSAQYVEEAKK---FGIRVTR-DQINQHFGQAYKKQLTKAPFYGISKGMTPKSWWKELVYSTFISAGIKEKDLDRNFDQLYNALYTRFTTAE-AYSIFPDVLSSLNELK----QHGFQMGVISNSDERVVKVIENLNLNKYFDFVIASSLVECEKPSRRIYEKALEVAGNVRAEHALHVGDDVDKDYFGATKAGWNAVLL 215          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|1043303728|gb|OBZ88477.1| (Haloacid dehalogenase-like hydrolase domain-containing protein 3 [Choanephora cucurbitarum])

HSP 1 Score: 116.316 bits (290), Expect = 1.877e-26
Identity = 66/210 (31.43%), Postives = 117/210 (55.71%), Query Frame = 0
Query:  116 LITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAG 325
            LIT +A+  L +P   +   + E   K   + +R+ R E+    F +AY  + ++ P +G   GM+ + WW  + Y TF++ G   +DLD  F  +++ LY    T+E A+    DVL  +D+L++     G ++GVI + DER++ ++E+L++  YFD V++S   G  KP    +  A+++AG   P++ +H+G + + D  GA  AG
Sbjct:    7 LITFDAYNTLFKPKGSLSAQYVEEASK---FGIRVTR-EQINHHFGQAYKQQLTKAPFYGLSKGMTPQGWWKELVYSTFMNAGVKAKDLDSSFDPLYDALYARFTTAE-AYSIFPDVLDTLDQLKKL----GYQMGVISNSDERVVKVIESLNLNKYFDFVLASALVGHEKPSKIIYQEALKQAGHLKPEQALHVGDDIEKDYFGATKAG 207          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|873236348|emb|CEL99231.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 115.546 bits (288), Expect = 8.975e-26
Identity = 87/298 (29.19%), Postives = 129/298 (43.29%), Query Frame = 0
Query:  112 PVPELITMNAFGLLIEPTDEVG----LFFREVFMKHYDYKVRLPR--PERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDE-------VFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGG----PKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKA----------------------GVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQV--EFTKIGDLEAVLTMFDKSDP 368
            P P L+T++  G L  P   VG    L  RE   +   ++  L     +  T AF KAY A+ +E+P FGA   +S+ EWW  +   T++  G     L          F  VF +LYY+    E  W  + +   ++  L  WR   G    P +GVI ++DER    L    +L YFD V+ SRE G  KP P+ F  A+E+A                      GV D    +H+G +F+ D+VGA  AG      V+ +    +P+ +       F  +  LE +  +F    P
Sbjct:   20 PRPSLVTLDVTGTLFTPRIPVGESYLLALREHLPEGSGWERHLEELDADALTTAFMKAYKAKSAEHPAFGAATNLSSVEWWRDVVRHTYIHGGVDPALLQHEDGGSSGYFDRVFADLYYDVFVGERGWALLPNTHEVLQALSSWRGSLGADERPVMGVISNFDERATEALARFGLLQYFDFVLLSREQGVEKPHPQIFQSAVEEARRVRQQWTKEGEPASPSSSSCVGV-DRTTHVHIGDSFERDIVGATQAGWSG---VLVNNKGRQPKSDTNSAVNNFVSVNSLEDIPALFGLPTP 313          
BLAST of EWM30525.1 vs. NCBI_GenBank
Match: gi|727135794|emb|CEG81189.1| (hypothetical protein RMATCC62417_15417 [Rhizopus microsporus])

HSP 1 Score: 114.005 bits (284), Expect = 1.378e-25
Identity = 71/226 (31.42%), Postives = 118/226 (52.21%), Query Frame = 0
Query:  113 VPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDY 338
            V +LIT +A+  L +P   +   + E   K   Y +++ +  + T  F +AY  ++ + P +G K GM+ +EWW  + Y TF   G   ++LD  F  ++  LY    T+  A+    DV+  +D+L+      G K+GVI + DER+  ++ENL +  YFD V++S + G  KPD   F  A++ AG    +  +H+G + + D  GAA AG  S+ +      Y
Sbjct:    5 VIKLITFDAYNTLFKPRGSLSAQYVEEAAK---YGIKVTK-NQITDHFGQAYRKQQLKAPFYGIKQGMTPQEWWKELVYATFSSAGVHPKELDTSFDQLYNALY-NRFTTAAAYSIFPDVVSTLDELK----TRGFKMGVITNSDERVAKVVENLKLDKYFDFVLASADVGYEKPDKVIFDRALKIAGNVSAENALHVGDDLNKDYFGAAYAGWHSVLLARSKLSY 221          
The following BLAST results are available for this feature:
BLAST of EWM30525.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113189|gb|EWM30525.1|0.000e+0100.00haloacid dehalogenase-like hydrolase domain contai... [more]
gi|299471648|emb|CBN76870.1|4.031e-3335.71haloacid dehalogenase-like hydrolase [Ectocarpus s... [more]
gi|260793048|ref|XP_002591525.1|9.344e-2932.68hypothetical protein BRAFLDRAFT_131048 [Branchiost... [more]
gi|511009916|gb|EPB91148.1|1.541e-2731.34hypothetical protein HMPREF1544_02028 [Mucor circi... [more]
gi|1026273340|gb|OAD06347.1|1.944e-2731.34hypothetical protein MUCCIDRAFT_106918 [Mucor circ... [more]
gi|1021065108|emb|SAL98783.1|4.425e-2733.94hypothetical protein [Absidia glauca][more]
gi|758356594|dbj|GAN01465.1|1.252e-2630.88haloacid dehalogenase-like hydrolase domain-contai... [more]
gi|1043303728|gb|OBZ88477.1|1.877e-2631.43Haloacid dehalogenase-like hydrolase domain-contai... [more]
gi|873236348|emb|CEL99231.1|8.975e-2629.19unnamed protein product [Vitrella brassicaformis C... [more]
gi|727135794|emb|CEG81189.1|1.378e-2531.42hypothetical protein RMATCC62417_15417 [Rhizopus m... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna208rna208Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications