EWM28603.1, cds2079 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|585111021|gb|EWM28603.1| (phospholipid n-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 394.43 bits (1012), Expect = 7.982e-139 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 Query: 1 MQSSRSTCCNMGISLAFPVNEGLGLLLLALSTPHLLYFFTWTCTGAFTRIAKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEHHF 195 MQSSRSTCCNMGISLAFPVNEGLGLLLLALSTPHLLYFFTWTCTGAFTRIAKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEHHF Sbjct: 1 MQSSRSTCCNMGISLAFPVNEGLGLLLLALSTPHLLYFFTWTCTGAFTRIAKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEHHF 195
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|760447647|ref|XP_011400892.1| (hypothetical protein F751_5940 [Auxenochlorella protothecoides] >gi|675355462|gb|KFM27902.1| hypothetical protein F751_5940 [Auxenochlorella protothecoides]) HSP 1 Score: 109.768 bits (273), Expect = 7.651e-27 Identity = 64/171 (37.43%), Postives = 93/171 (54.39%), Query Frame = 0 Query: 26 LLLALSTPHLLYFFTWTCTGAFTRIAKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPP-MKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEHHF 195 ++ L+ PHLLY + W + + K G ++ F + LLK +Q +++ W P + + SI P + L + AGQ LN+G+Y A+G GVYYG +LG + W EGFPF VV HPQYVG VL +W A +L A AGL + + W+ Y +T + E F Sbjct: 14 VITTLALPHLLYAYIWFNSSTWL---KTFGKKSVQRFETAAWLLKVLQFSSVIYWYSVKKPEGVILGSISPFAAGISLVLLAAGQALNIGIYRAIGHAGVYYGFKLGHKVPWVEGFPFNVVSHPQYVGSVLSVWA--AAILVWAQGPAGLGLLVAYWTGLYVITAIQESCF 179
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|926787064|ref|XP_013902006.1| (hypothetical protein MNEG_4975 [Monoraphidium neglectum] >gi|761972603|gb|KIZ02987.1| hypothetical protein MNEG_4975 [Monoraphidium neglectum]) HSP 1 Score: 108.612 bits (270), Expect = 3.061e-26 Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = 0 Query: 29 ALSTPHLLYFFTWTCTGAFTRI-AKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEHH 194 AL+ PH LY F W + R+ V+AFA F L +L+F +G ++ + + + ++ LQ + L +FG GQ LN G++ A+G GVYYG +LG + W +G+PF V HPQYVG VL +W +VA+L Q A LL +A W+T Y +TGL E Sbjct: 30 ALAAPHFLYAFIWFKPDRWQRLFCGTKAVDAFAFFGALGKVLQFTVVGLWLSCQLPAGLCLDLRAVGLLQWLAALALFGYGQSLNAGIFRAIGHVGVYYGFKLGHEVPWVKGWPFDTVSHPQYVGSVLSVWAIVALLWGQVASPA-LLVLAGYWTTLYVITGLQEDR 195
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|552845905|ref|XP_005851476.1| (hypothetical protein CHLNCDRAFT_137846 [Chlorella variabilis] >gi|307111139|gb|EFN59374.1| hypothetical protein CHLNCDRAFT_137846 [Chlorella variabilis]) HSP 1 Score: 104.375 bits (259), Expect = 8.324e-25 Identity = 65/170 (38.24%), Postives = 89/170 (52.35%), Query Frame = 0 Query: 25 LLLLALSTPHLLYFFTWTCTGAFTRIAKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPP-MKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEH 193 L+ L L+ PH LY + W + K VE F L+ LK VQ ++ W + P + V ++PPL +G+ +F GQ LN+G++ A+G GVYYG +LG I W GFPF VV HPQYVG V I G ++ +QA AGL + W+ Y T E Sbjct: 11 LVCLGLALPHFLYAYIWFFPQQWMAAFKKRSVEVFE---TLAWALKGVQFLSVAYWWLLRKPAGVDVTAVPPLAWPLGIALFAFGQWLNVGIFQAIGHPGVYYGFKLGHTIPWASGFPFNVVSHPQYVGSVASILGAAVLVWSQA--PAGLGLLVCYWTLLYVATAFQED 175
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|1004134447|gb|KXZ42553.1| (hypothetical protein GPECTOR_136g636 [Gonium pectorale]) HSP 1 Score: 94.7449 bits (234), Expect = 6.800e-21 Identity = 56/175 (32.00%), Postives = 85/175 (48.57%), Query Frame = 0 Query: 26 LLLALSTPHLLYFFTWTCTGAFTRIAKAVGVEAFALFYKLSVLLKFVQLGALVTW-------GMQYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEH 193 L ++ PHL+Y W + G + LF + + K +Q +V W G+ + P+ + QV++ + G GQ LN+G Y ALG GVYYG RLG+ + W +G+PF + HPQYVG + IWG +A+ A + I W+ Y ++G IE Sbjct: 29 FLFVIALPHLIYALVWLSPKVWW---GTFGKNSLPLFASVGIFGKVLQFSTMVLWLWSSQPTGLCFRQPLAL-----WQVLLAAALIGYGQALNLGTYRALGLAGVYYGCRLGRSVPWVKGWPFNAISHPQYVGSTMTIWGALALFHTAAPMPLSFF-IGIYWTCMYIMSGYIED 194
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|857971021|emb|CEP02882.1| (hypothetical protein PBRA_002849 [Plasmodiophora brassicae]) HSP 1 Score: 94.3597 bits (233), Expect = 7.534e-21 Identity = 59/172 (34.30%), Postives = 88/172 (51.16%), Query Frame = 0 Query: 30 LSTPHLLYFFTWTCTGAFTR-IAKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPPMKVASIP-PLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTV----VPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWST-FYCVTGLIEHH 194 S PH Y + W F K A +F L+ + K +QL ++ W + + P K P + VV + GQILN +Y A+G +GVYYG+RLG+P+ WY GFPF + +PHPQY+G + I G+ + L + +A+ST FY +T +IE + Sbjct: 13 FSLPHWFYAYVWVRPDLFIAGTKKWAAAHAVTVFASLATMFKVLQLIVILWWAVLHPPVAKEFPSPLSFRFVVCVLAVILGQILNAAIYWAIGHDGVYYGIRLGRPVPWYTGFPFHLFGVKIPHPQYLGSSMTICGLAGLFYTSTT---TYLPVIAAFSTVFYVITAIIEEN 181
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|545365016|ref|XP_005647515.1| (hypothetical protein COCSUDRAFT_63364 [Coccomyxa subellipsoidea C-169] >gi|384249490|gb|EIE22971.1| hypothetical protein COCSUDRAFT_63364 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 90.1225 bits (222), Expect = 7.025e-20 Identity = 46/129 (35.66%), Postives = 70/129 (54.26%), Query Frame = 0 Query: 69 LKFVQLGALVTW----GMQYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGLLTIASAWSTFYCVTGLIEH 193 ++ +Q G++V W + + + ++ Q + GQ+LN+ VY L GVYYG +LGK +AW GFPF V HPQY+G VL +WGV ++L + + GLL +A W+ Y +T E Sbjct: 1 MRLLQFGSIVAWYVVKSKEQGLKLDLLNVTWPQWTAFFALVFIGQVLNISVYNTLSTNGVYYGTKLGKKVAWVRGFPFNTVSHPQYLGAVLTVWGVASLLWDVS--PPGLLILAGYWTALYAMTAFWEQ 127
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|1149172202|ref|WP_077730056.1| (hypothetical protein [Methylocaldum sp. 14B]) HSP 1 Score: 88.5817 bits (218), Expect = 1.201e-18 Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 28 LALSTPHLLYFFTWTCTGAFTRIAKAVGV----EAFALFYKLSVLLKFVQLGALVTWGM---QYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVL 164 L LS + Y + W F + K + E ++ KL + K +Q+G + W M + P+ +S+ P+ + G+G+ GQ+ N GV+ LG+ GV+YG + G I W FPF+V+ HPQYVG +L IWG V+ Sbjct: 11 LLLSIERITYLWIWHHPDTFKAVCKYPAIVRFGEPISVLEKLFYIFKILQIGIFLAWCMLLGNTLIPLPTSSLVPMSL--GIGLIVIGQVFNFGVFYRLGRSGVFYGNKFGYEIQWCNAFPFSVLSHPQYVGTLLSIWGFFLVM 152
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|1196470562|ref|WP_086134630.1| (hypothetical protein [Methylocaldum sp. SAD2]) HSP 1 Score: 87.4261 bits (215), Expect = 3.125e-18 Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = 0 Query: 28 LALSTPHLLYFFTWTCTGAFTRIAKAVGV----EAFALFYKLSVLLKFVQLGALVTWGM---QYMPPMKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVL 164 L LS + Y + W F + K + E + KL + K +Q+G + W M + P+ +S+ P+ + G+G+ GQ+ N GV+ LG+ GV+YG + G I W FPF+V+ HPQYVG +L IWG V+ Sbjct: 11 LLLSIERITYLWIWHHPDTFKAVCKYPAIVRFGEPISALEKLFYIFKILQIGIFLAWCMLLGNTLIPLPTSSLVPMSL--GIGLIVIGQVFNFGVFYRLGRSGVFYGNKFGYEIQWCNAFPFSVLNHPQYVGTLLSIWGFFLVM 152
BLAST of EWM28603.1 vs. NCBI_GenBank
Match: gi|929771842|ref|XP_014160854.1| (hypothetical protein SARC_00903 [Sphaeroforma arctica JP610] >gi|906958847|gb|KNC86952.1| hypothetical protein SARC_00903 [Sphaeroforma arctica JP610]) HSP 1 Score: 86.2705 bits (212), Expect = 1.267e-17 Identity = 53/176 (30.11%), Postives = 81/176 (46.02%), Query Frame = 0 Query: 25 LLLLALSTPHLLYFFTWTCTGAFTRIAKAVGVEAFALFYKLSVLLKFVQLGALVTWGMQYMPP------MKVASIPPLQVVVGLGMFGAGQILNMGVYTALGKEGVYYGVRLGKPIAWYEGFPFTVVPHPQYVGCVLCIWGVVAVLLNQANIDAGL--LTIASAWSTFYCVTGLIE 192 LL LS PH++Y W F + + + E + + LK Q A + W + + M +P + + GQ+LN Y L ++GVYYG +LGK I W GFPF HPQY+GCV IWG ++L + + L+I + W+ Y + ++E Sbjct: 20 LLGAVLSLPHVVYRDIWQNPQPFIKKCEKIKKEPVKVMATIGYTLKTAQYLACLLWSYRTLSDENGNFVMSFQDLPRGVTALAFSLILFGQVLNFSTYKTLKQDGVYYGAKLGKNIPWVHGFPFNTFNHPQYLGCVCSIWGATLLVLCTVHFYRWMHVLSIGTWWTMLYLFSSIVE 195 The following BLAST results are available for this feature:
BLAST of EWM28603.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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