EWM28575.1, cds2069 (CDS) Nannochloropsis gaditana

Overview
NameEWM28575.1
Unique Namecds2069
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:831839..833308 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28575.1
ProductMembrane insertion protein, OxaA/YidC
Orig transcript idgnl|cribi|Naga_100009g85.618.mrna
GeneAlb3
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:831839..833308 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003674molecular_function
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0051205protein insertion into membrane
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR001708Membrane_insert_OXA1/ALB3/YidC
IPR028055Membr_insert_YidC/Oxa1_C
Homology
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|585110993|gb|EWM28575.1| (Membrane insertion protein, OxaA/YidC [Nannochloropsis gaditana])

HSP 1 Score: 1013.06 bits (2618), Expect = 0.000e+0
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0
Query:    1 MPQPFFWSCREQCCDPCLQHSHRSELSYLFDFFHSNRMVMRTHQREMWRQQQCLGRRLGSCIFCLLMASLLFTSEVVTAFVPVATRRPDLLHVSRPPFPSRATPGTRALRMVLQPHDVVTHLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPSTVAMGFEEMMAEATRNALPSEQPKRDRPTPSSLLKASESVVAEEGGKRDEEAGRVGEEREKAGVEA 489
            MPQPFFWSCREQCCDPCLQHSHRSELSYLFDFFHSNRMVMRTHQREMWRQQQCLGRRLGSCIFCLLMASLLFTSEVVTAFVPVATRRPDLLHVSRPPFPSRATPGTRALRMVLQPHDVVTHLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPSTVAMGFEEMMAEATRNALPSEQPKRDRPTPSSLLKASESVVAEEGGKRDEEAGRVGEEREKAGVEA
Sbjct:    1 MPQPFFWSCREQCCDPCLQHSHRSELSYLFDFFHSNRMVMRTHQREMWRQQQCLGRRLGSCIFCLLMASLLFTSEVVTAFVPVATRRPDLLHVSRPPFPSRATPGTRALRMVLQPHDVVTHLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPSTVAMGFEEMMAEATRNALPSEQPKRDRPTPSSLLKASESVVAEEGGKRDEEAGRVGEEREKAGVEA 489          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|873236712|emb|CEL98483.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 286.96 bits (733), Expect = 7.692e-88
Identity = 169/429 (39.39%), Postives = 247/429 (57.58%), Query Frame = 0
Query:   40 MRTHQREMWRQQQCLGRRLGSCIFCLLMASLLFTSEVVTAFVPVATRRPDLLHVSRPPFPSRATPGT------RALRMVLQPHDVVTHLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELV-SLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVD---PEDLGY-----DPSTV-AMGFEEMMAEATRNALPSEQPKRDR 450
            MR H+R      Q L   L  CI     A+    +   TA   +   RP L   SRP  P    P T       AL  +  P        P  +  V QGVA AA    +A   AV   T+  AKEPG++D +V+ +   I  VH  +    G+P  +G AII+FT  +++ + P+T+ QM+  Q++QAL P  +E+K ++GKN+ +   LTA+LY++A+VNPLA  LPA  QIPIF+ LYRSL NLA +   +E FLW+P+L GP +G   A+  +WL   W    P LGW  T+ +LT+PVI +++Q ISQ +LTPP++D ++ + Q +LKYLP ++GYF+LSVPS L +YWI +N++ TAIS S+K+ F   PI  D+ +D   PE+L       D S +  M +E+++ +A  +A+P    +R R
Sbjct:    1 MRYHRR------QWLAAALALCIGLNHYAAGFARTSAFTAVNRLQASRPPLRR-SRPS-PRMLDPTTLSALLPAALSFIPSPPVSAGGFGP--VMEVLQGVAQAAGEGGEAVGQAVQTVTEEVAKEPGWWDNYVSFLENMIYQVHHVMEDKFGIP-QFGWAIIVFTVLIRIFVFPITWNQMQGTQKIQALNPVVQEIKKRFGKNQQIQTLLTAQLYQEAKVNPLASILPAFVQIPIFLGLYRSLSNLAKDGQLSESFLWIPNLEGPTFGADPAQALNWLTTGWDGSNPPLGWEATLLYLTVPVIYVISQYISQAILTPPAEDEQSKRVQELLKYLPFLIGYFALSVPSALVIYWIASNVLVTAISWSLKQYFKSNPIEYDIKLDDIIPEELKNMLPTPDVSDILNMSWEDLLKDAQTHAVPPRASRRPR 418          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|676382855|ref|XP_009034706.1| (hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens] >gi|323455292|gb|EGB11161.1| hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens])

HSP 1 Score: 279.641 bits (714), Expect = 1.356e-86
Identity = 148/309 (47.90%), Postives = 204/309 (66.02%), Query Frame = 0
Query:  168 NTVMGAIEGVHSEL-VSLGVP-GAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSD-DPKTAQT-QRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPSTVAMG----FEEMMAEATRNALPSEQPKRD--RPTPSSLLKASESVVAE 466
            N V GAIEG+H  +   LG+   ++G++IILFTA ++  + P+ +   ES +R +AL P   ++KD+YG+++  +N  TAKLYE  E NPLAGCLPA+AQIP+FIALYRS++NLA +    E F ++P+L GP Y   RG  WL  NWVDGVP+LGWHDT+AFL +PV L++TQSIS R+LTPP D + K+AQ   RVLKYLP+M+G+FS +VPSGLG+YW+T+N+ S A S+  K      P  +DV++   +LG D  +  +      EE + EA  NA P   P R   +P P  L   + + VA 
Sbjct:   44 NGVQGAIEGLHDGIHDGLGIKQNSWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRYGEDQQAVNLATAKLYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPTYDNGRGIQWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPPPDPNDKSAQNANRVLKYLPLMIGWFSANVPSGLGLYWMTSNVFSVAGSLGAKAYLKANPPKLDVEL--RELGLDDESAGVKLPATLEEALVEARVNARPDRTPLRRGVQPIPVFLTVDATAAVAN 350          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|585110350|gb|EWM28009.1| (Membrane insertion protein, OxaA/YidC [Nannochloropsis gaditana])

HSP 1 Score: 279.641 bits (714), Expect = 5.461e-86
Identity = 160/312 (51.28%), Postives = 204/312 (65.38%), Query Frame = 0
Query:  105 GTRALRMVLQPHDVV----THL--DPAWLSHVFQGVADAAVTSLDATNAAVDAT---TDAAAKEPGFFDKFVNTVMGAIEG----VHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPS--DDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIK 399
             +R L+ V+ P  V     THL     WL    QGVADAA  +   T  AV+ +   T AAA        ++   +GAIE     +H  L   G+   YGL+II FT  VKL  LP+ YKQ+ES  +MQA+ PK KE++ KY  +  L  Q  A+LY D  VNPLAGCLPAL QIPIFI+LYR+L NLA  ++ NEPFLWLP+L GP YG   A G +WL K W    P+LGWHDTIAFLT+P+ILI++QSISQ++L P +  DDP   Q+Q +LK+LP MVGYFSL+VPSGLGVYWI NNLI+T  +++++
Sbjct:   77 ASRTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAPDTAGAVEGSKEMTGAAAAAAANNGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWL-KQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 387          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|553189133|ref|XP_005854940.1| (preprotein translocase subunit YidC, partial [Nannochloropsis gaditana CCMP526] >gi|422294128|gb|EKU21428.1| preprotein translocase subunit YidC, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 271.937 bits (694), Expect = 1.872e-85
Identity = 132/227 (58.15%), Postives = 167/227 (73.57%), Query Frame = 0
Query:  177 VHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPS--DDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIK 399
            +H  L   G+   YGL+II FT  VKL  LP+ YKQ+ES  +MQA+ PK KE++ KY  +  L  Q  A+LY D  VNPLAGCLPAL QIPIFI+LYR+L NLA  ++ NEPFLWLP+L GP YG   A G +WL K W    P+LGWHDTIAFLT+P+ILI++QSISQ++L P +  DDP   Q+Q +LK+LP MVGYFSL+VPSGLGVYWI NNLI+T  +++++
Sbjct:    1 MHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWL-KQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 226          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|299117626|emb|CBN75468.1| (Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus])

HSP 1 Score: 277.33 bits (708), Expect = 1.053e-84
Identity = 165/381 (43.31%), Postives = 217/381 (56.96%), Query Frame = 0
Query:  105 GTRALRMVLQPHDVVTHLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSD-----DPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPSTVAMGFEEMMAEAT-----RNALPS----EQPKRDRPTPSSLLKASESVVAEEGG 469
            G R L+ ++ P  ++  +DPAWL  V  G+AD  V +     A   A        P           GAI G+H  L S+GVP AYG++II FT  VK    P+TY+Q+ S  +MQ L PK KEL+ +Y  N    NQ   +LY+   VNPLAGCLPALAQIPIFI+LYRSL+NLA  +   E FLW+PSL GP +         W+ K+W DG P LGWHDTIA++TIP+IL++TQSIS R++ P  D     D   A +Q ++K+LP+M+G+FSLSVPS LG+YWI NN ISTA S+ I+ + A      D   DP         + + F E   E       R ALP     E+ K   PTP++L    E  + +E G
Sbjct:   57 GARGLQAMVDP-GMMHGVDPAWLHQVLTGIADGDVAA---AVAEEAAKGGGGGFHP--IQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIA------DETGDPN---MKAPKITLPFMEEEPEVVTMPIPREALPDSAVVEETKGFVPTPATLDAEVEGEIVKEDG 421          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|553193131|ref|XP_005855715.1| (preprotein translocase subunit YidC [Nannochloropsis gaditana CCMP526] >gi|422293337|gb|EKU20637.1| preprotein translocase subunit YidC [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 276.944 bits (707), Expect = 3.948e-84
Identity = 134/237 (56.54%), Postives = 171/237 (72.15%), Query Frame = 0
Query:  167 VNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPS--DDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIK 399
            +  +  AI  +H  L   G+   YGL+II FT  VKL  LP+ YKQ+ES  +MQA+ PK KE++ KY  +  L  Q  A+LY D  VNPLAGCLPAL QIPIFI+LYR+L NLA  ++ NEPFLWLP+L GP YG   A G +WL K W    P+LGWHDTIAFLT+P+ILI++QSISQ++L P +  DDP   Q+Q +LK+LP MVGYFSL+VPSGLGVYWI NNLI+T  +++++
Sbjct:  114 IGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWL-KQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 349          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|224001688|ref|XP_002290516.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973938|gb|EED92268.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 268.47 bits (685), Expect = 2.610e-81
Identity = 145/349 (41.55%), Postives = 212/349 (60.74%), Query Frame = 0
Query:   83 VATRRPDLLHVSRPP-FPSRATPGTRALRMV----LQPHDVVTHLDPA---WLSHVFQGVADAAVTSL-------------DATNAAVDATTDAAAK---EPGFFDKFVNTVMGAIEGVHSELVSLGVP-GAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAK 404
            +A   P  LH   PP   +     T  L MV    L  HD+  H++     + S V   +   +VTS+             +AT AA++A T ++A    + G+F      + G ++ +H  L S+G+   A+G++II  T  +K    P+T  Q+ES  +MQAL P  K L+ KY  N  ++NQ  A++Y+  EVNPLAGC+P+L QIP+FI LYR+++NLA  +  +EPFL+LP+L GP YG   A G+DWLFKNWVDGVP LGW DTIAFL+IPV L ++Q IS  ++ P +DDP+  Q   +LK LP M+G+F+L+VP+ LGVYW+ NN+++TA ++ ++    K
Sbjct:    8 LALSAPTSLHAFAPPSLKASHHAFTSKLSMVDPSMLAHHDITPHVETINNFFSSLVLSDLNVDSVTSVAAPVQPLGASPSPEATKAAIEAVTASSADPNAQNGWFGFLTLPIEGLLKLIHGGLDSMGMSSNAWGISIIAMTVVIKALTFPLTKSQLESTNKMQALQPTIKSLQAKYQSNPEVMNQKIAEVYQTNEVNPLAGCIPSLVQIPVFIGLYRAVLNLAKENALDEPFLFLPNLEGPTYGADPAHGSDWLFKNWVDGVPGLGWEDTIAFLSIPVFLTISQVISMNMMQPKTDDPQQQQANVILKVLPFMIGWFALNVPAALGVYWVVNNIVTTATTLYVRNSMPK 356          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|1210525297|dbj|GAX15917.1| (YidC/Oxa1 family membrane protein insertase [Fistulifera solaris])

HSP 1 Score: 267.314 bits (682), Expect = 4.139e-81
Identity = 131/291 (45.02%), Postives = 191/291 (65.64%), Query Frame = 0
Query:  113 LQPHDVVTHLDPAWLSHVFQGVADAAVTSL-DATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPG-AYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIK 399
            L P D  + L P  +S + Q    ++ T L DA     DA T+ A  + G+F      +M  ++ +H+ LV++GV   A+G++II  T  +K    P+T  Q+ES  +MQA+ P  KEL+ KY  N  ++NQ  A+ Y+  ++NPLAGCLP+LAQIPIFI LYR++++LA  +  NEPFLWLP+L GP YG     G+DWLFK W DGVP+LGW DTI+FL +PV+L+++Q +S  L+ P + D    Q+  +LK LP+M+G+FSL+VP+ L VYW  NN+I+T +S+ I+
Sbjct:   35 LVPLDAFSDL-PQHMSSILQDAFGSSSTFLADAMEVTADAATEVAKTDNGWFGFLTGPIMFLLQLIHAGLVAVGVSANAWGVSIIAITLLIKAVTFPLTKTQLESTNKMQAMQPAIKELQAKYQSNPEVMNQKIAEFYQSNDINPLAGCLPSLAQIPIFIGLYRAVLDLAQENKLNEPFLWLPNLEGPTYGADPTSGSDWLFKGWTDGVPSLGWDDTISFLILPVLLVVSQYLSMELMQPKTTDSAQQQSNAILKVLPLMIGWFSLNVPAALCVYWFVNNVITTGLSLFIR 324          
BLAST of EWM28575.1 vs. NCBI_GenBank
Match: gi|1189381885|gb|OSX69517.1| (hypothetical protein BU14_1439s0001 [Porphyra umbilicalis])

HSP 1 Score: 265.388 bits (677), Expect = 2.852e-80
Identity = 131/267 (49.06%), Postives = 178/267 (66.67%), Query Frame = 0
Query:  137 AAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ-ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKF 402
            AA T L      V A  +  AK+PG FD+ V  V   + G H  L    +PGAYG+AII FT  VKL   P+ YKQMES+ +MQAL P+ K L+ +Y  N  ++NQ+ AKLY+D ++NPLAG +P   QIP++IALYR+L+NLA  +  +EPFLWLPSL GP+    A   DWLF   V+G P +GWHD + +L IP+ L+  Q+ SQ+LL PPS DP   +    LK+LP+++G+FSL+VPSGLGVYW+TN   ST  ++ I+++F
Sbjct:   90 AATTWLADAAVDVTAAAEEVAKKPGLFDQLVQLVERLLCGSHDVLAGAHIPGAYGVAIIGFTVAVKLVTFPLNYKQMESSMKMQALQPRMKALQTEYRDNPQVMNQMIAKLYKDEDINPLAGLVPVFVQIPVWIALYRALLNLASENRLDEPFLWLPSLQGPVSQTGASLKDWLFP-LVNGAPPVGWHDALCYLVIPIGLVALQAYSQKLLQPPSQDPAAQKANGFLKFLPLLIGWFSLNVPSGLGVYWVTNTAFSTLQTVFIRKRF 355          
The following BLAST results are available for this feature:
BLAST of EWM28575.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110993|gb|EWM28575.1|0.000e+0100.00Membrane insertion protein, OxaA/YidC [Nannochloro... [more]
gi|873236712|emb|CEL98483.1|7.692e-8839.39unnamed protein product [Vitrella brassicaformis C... [more]
gi|676382855|ref|XP_009034706.1|1.356e-8647.90hypothetical protein AURANDRAFT_22501 [Aureococcus... [more]
gi|585110350|gb|EWM28009.1|5.461e-8651.28Membrane insertion protein, OxaA/YidC [Nannochloro... [more]
gi|553189133|ref|XP_005854940.1|1.872e-8558.15preprotein translocase subunit YidC, partial [Nann... [more]
gi|299117626|emb|CBN75468.1|1.053e-8443.31Alb3 homolog, thylakoidal inner membrane insertase... [more]
gi|553193131|ref|XP_005855715.1|3.948e-8456.54preprotein translocase subunit YidC [Nannochlorops... [more]
gi|224001688|ref|XP_002290516.1|2.610e-8141.55predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210525297|dbj|GAX15917.1|4.139e-8145.02YidC/Oxa1 family membrane protein insertase [Fistu... [more]
gi|1189381885|gb|OSX69517.1|2.852e-8049.06hypothetical protein BU14_1439s0001 [Porphyra umbi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2077rna2077Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications