EWM28567.1, cds2068 (CDS) Nannochloropsis gaditana

Overview
NameEWM28567.1
Unique Namecds2068
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:829953..830002 +
Alignment locationCM002458.1:830199..831477 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28567.1
ProductOxidoreductase
Orig transcript idgnl|cribi|Naga_100009g86.610.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:829953..830002 +
CM002458.1supercontigCM002458.1:830199..831477 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR000683Oxidoreductase_N
Homology
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|585110985|gb|EWM28567.1| (Oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 915.605 bits (2365), Expect = 0.000e+0
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0
Query:    1 MMAGAKPRQPVDMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDFDAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEEADRTWSAPEGGEENHPFPIDIRPVEF 442
            MMAGAKPRQPVDMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDFDAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEEADRTWSAPEGGEENHPFPIDIRPVEF
Sbjct:    1 MMAGAKPRQPVDMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDFDAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEEADRTWSAPEGGEENHPFPIDIRPVEF 442          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|299471361|emb|CBN79316.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0
Identity = 295/438 (67.35%), Postives = 335/438 (76.48%), Query Frame = 0
Query:    6 KPRQPVDMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPT-DGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDFDAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEEADRTWSAPEGGEENHPFPIDIRPVEF 442
            +  + V++ MIGTGEYTTGYVHG ASDSDK AGVVALTM DLRRRGK+ RLGLCGTNG KFPGIRAHM +AIG  Y+ LD+TM+++P  DG  DP AY  AL+ F PGDA T+FTPDDTHFDIA+  V+RG+H +VTKPVVKTL EHRAL +AA+ +GVLVMVEVHKRFDPIY+DA+D+I+ LG  SYMYSYMSQPKHQLDTFRAWAGK SDISYYLNSHH DF EWA        R +   S+ +A       TEDTITL V+W+N     S GT +YTSSWVAPK+DVHSQQRFFYMG  GE+NVDQAHRGYT+A D   G GF+SVNPLFMKYTPTDG F+GQ GYGY SFEAFVDAV  I++G A+   FD+ LATIGTT LTTAILEAGR SLD  GRP EI Y            GGE+ H  P DI PVEF
Sbjct:   47 REEKAVNLCMIGTGEYTTGYVHGGASDSDKGAGVVALTMSDLRRRGKVNRLGLCGTNGAKFPGIRAHMQRAIGDQYRDLDLTMESWPAEDGPRDPAAYKEALDTFDPGDACTVFTPDDTHFDIAMEAVQRGMHAIVTKPVVKTLKEHRALHEAAKEAGVLVMVEVHKRFDPIYVDARDRIRDLGGMSYMYSYMSQPKHQLDTFRAWAGKSSDISYYLNSHHVDFQEWANMNHGEQRRST---SSDIA-------TEDTITLLVEWENL-EDGSKGTAVYTSSWVAPKADVHSQQRFFYMGQKGEINVDQAHRGYTVAKD---GDGFRSVNPLFMKYTPTDGYFSGQTGYGYRSFEAFVDAVRQIEAGMATPETFDSKLATIGTTYLTTAILEAGRLSLDGNGRPFEITY------------GGEDKH-IPTDIVPVEF 457          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|224009520|ref|XP_002293718.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970390|gb|EED88727.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0
Identity = 272/433 (62.82%), Postives = 329/433 (75.98%), Query Frame = 0
Query:   12 DMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQA-LGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDF-DAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEEADRTWSAPEGGEENHPFPIDIRPVEF 442
            ++LM+GTGEYTTGYV G+A+DSDK AGVVALTMFDLRRRGK+ R+G+CG NGKKFPGIR HM K IG  Y  +D+T DT+P+D  +DP+AYI A+  F+PGD A IFTPDDTH+DIA+AC+ +G+HV+VTKP+V+TL  H  L  AA+   VLV +EVHKR+DP Y DA+D+ ++  G F YMY+YMSQPKHQL+TF+AWAGK SDIS+YLNSHH DF EW ++G +RP+RV+A +STG+A  +  M TED+ITL+VQW+N     SLG  +YTSSWVAPK DVHSQQRFFYMG  GE+NVDQAHRG T+A D   G  F SVNPLFMKYTPT+G F+GQ  YG  SFE FVDA  +I SG   V DF D +LAT+GTT   TAILEAGRRSLDA GRPM+I+Y           EGG      PI I+P EF
Sbjct:   23 NVLMVGTGEYTTGYVGGQAADSDKGAGVVALTMFDLRRRGKVSRVGMCGVNGKKFPGIRNHMQKNIGDVYNQMDLTCDTYPSDETIDPKAYIDAISTFQPGDVAIIFTPDDTHYDIAMACINQGMHVMVTKPIVQTLEHHNNLIKAAKEKNVLVSMEVHKRWDPFYADARDRARSQFGNFQYMYAYMSQPKHQLETFKAWAGKSSDISFYLNSHHIDFSEWTLEGIARPIRVTATSSTGIAHSK-GMQTEDSITLTVQWENL-DDKSLGCAVYTSSWVAPKGDVHSQQRFFYMGANGEINVDQAHRGMTVAQD---GKPFASVNPLFMKYTPTNGMFSGQGSYGVKSFECFVDACREINSGSQKVTDFDDGSLATVGTTVQGTAILEAGRRSLDADGRPMDIMY----------DEGGH----VPIGIKPHEF 436          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|1072232827|gb|OEU17558.1| (NAD(P)-binding protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 540.806 bits (1392), Expect = 0.000e+0
Identity = 257/405 (63.46%), Postives = 317/405 (78.27%), Query Frame = 0
Query:   11 VDMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQ-ALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDF-DAALATIGTTALTTAILEAGRRSLDAGGRPMEIVY 413
            V++LM+GTGEYTTGYV G+A+DSDK AGVVALTMFDLRRR K+ R+G+CG NGKKFPGIR HM   IG  Y  +D+T DTFP+D  VDP+AY  A + F+PGD A IFTPDDTHFDIA+AC++RG+HV+VTKP+V+TL +H+ L  AA   GVLV VEVHKR DP Y DA+D+++  LG F YMY+YMSQPKHQL+TF+AWAGK SDISYYLNSHH D+ EW + G +RP+RV+A ASTGVA  +  +DTED+ITL+VQW+N     +LG  +YTSSW APKSDVHSQQRFF+MG  GE++VDQAHRG  +++D     G+ S+NPLFMKYTPT+G F+GQ  YG  SFE F+DA  D+ +G     D+ D +LAT+ TT   TAILEAGR+SLD GGRPM+I Y
Sbjct:    9 VNVLMVGTGEYTTGYVGGKAADSDKGAGVVALTMFDLRRRNKVDRIGMCGVNGKKFPGIRTHMQTNIGDVYDKMDLTCDTFPSDEQVDPKAYEVACQSFQPGDIAIIFTPDDTHFDIAMACIQRGMHVMVTKPIVQTLDDHQKLAKAASEKGVLVGVEVHKRLDPFYADARDRVRGGLGNFQYMYAYMSQPKHQLETFKAWAGKSSDISYYLNSHHIDWSEWTLAGVARPIRVTATASTGVAKSK-DIDTEDSITLTVQWENIN-DKTLGCAVYTSSWAAPKSDVHSQQRFFFMGTKGEISVDQAHRGACVSTDS---NGYASMNPLFMKYTPTNGMFSGQGCYGVRSFENFIDACSDVNAGTTKPSDYDDGSLATVYTTLQGTAILEAGRKSLDLGGRPMDIQY 408          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|1210519967|dbj|GAX21191.1| (hypothetical protein FisN_10Hh321 [Fistulifera solaris])

HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0
Identity = 266/431 (61.72%), Postives = 324/431 (75.17%), Query Frame = 0
Query:   15 MIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGL-DMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQ-ALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDF-DAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEEADRTWSAPEGGEENHPFPIDIRPVEF 442
            M+GTGEYTTGYV G+A+DSDK AGVVALTMFD+RRR K+ RLG+CG NG KFPGIR HM + IG  Y+G+ D+  DTFP D  + P+AY  A+  F+ GD A IFTPDDTH+DIA+ C++ G+HV+VTKP+V+ L  H AL +AA+A  VLV VEVHKR DP Y DA+D+ + +LG F YMY+YMSQPKHQL+TF+AWAGK SDISYYLNSHH D+ EW + G +RPVRV+A ASTG+A  +  M TED+ITL+VQW+NR  S +LG  +YTSSWVAPKSDVHSQQRFFYMG  GE+NVDQAHRG T+++DE   GGF SVNPLFMKYTPT+G F+GQ  YG  SFE F+DA   I +GKA   DF D +LAT+ TT   TAILEAGR+SLD+ GRPM+I+Y  +                 PI I+P EF
Sbjct:    1 MVGTGEYTTGYVGGKAADSDKGAGVVALTMFDMRRRQKVDRLGMCGVNGTKFPGIRQHMQRCIGDVYQGMGDLACDTFPRDDEIAPEAYKTAVASFRAGDVAIIFTPDDTHYDIAMECIQHGMHVMVTKPIVQNLQHHHALCEAAKAKNVLVAVEVHKRLDPFYADARDRARTSLGDFQYMYAYMSQPKHQLETFKAWAGKSSDISYYLNSHHIDWSEWTLAGMARPVRVTATASTGIAHSK-GMPTEDSITLTVQWENR-QSGALGCAVYTSSWVAPKSDVHSQQRFFYMGSKGEINVDQAHRGCTVSTDE---GGFASVNPLFMKYTPTNGMFSGQSSYGVKSFENFIDACAAINAGKAHPSDFDDGSLATVHTTLQGTAILEAGRKSLDSDGRPMDILYDNDGLD--------------PISIKPHEF 412          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|219121226|ref|XP_002185841.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582690|gb|ACI65311.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0
Identity = 259/414 (62.56%), Postives = 313/414 (75.60%), Query Frame = 0
Query:    2 MAGAKPRQPVDMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQA-LGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDF-DAALATIGTTALTTAILEAGRRSLDAGGRPMEIVY 413
            M  ++    V++LM+GTGEYTTGYV G A+DSDK AGVVALTMFDLRRR K+ R+G+CG NGKKF GIR+HM K IG  Y  +D+T +TFP D  VDP AY  A + F PGD A IFTPDDTHF IA+ C++RG+HV+VTKP+V+TLA+H+ L   A  + VLV VEVHKR DP Y DA+D+ ++ LG F YMY+YMSQPKHQL+TF+AWAGK SDISYYLNSHH D+ EW + G +RPVRV+A  S+GVA  +  M+TED+ITL+VQW+N     +LG  +YTSSW APKSDVHSQQRFFYMG  GE+NVDQAHRG T+A+D     GF SVNPLFMKYTPT+G F+GQ  YG  SFE F+DA   + +G A   DF D +LAT+ TT   TAILEAGR SLD  GRPM+I Y
Sbjct:    1 MVESESTTKVNVLMVGTGEYTTGYVGGGAADSDKGAGVVALTMFDLRRRNKVSRVGMCGVNGKKFAGIRSHMQKNIGDVYNDMDLTCETFPEDTVVDPLAYEVAAKAFYPGDVAIIFTPDDTHFAIAMNCIQRGMHVMVTKPIVQTLADHQKLAALAHENNVLVGVEVHKRLDPFYADARDRARSNLGDFQYMYAYMSQPKHQLETFKAWAGKSSDISYYLNSHHVDWSEWTLAGMARPVRVTATGSSGVAQSR-SMNTEDSITLTVQWENLNDQKTLGCAVYTSSWAAPKSDVHSQQRFFYMGSSGEINVDQAHRGCTVATD---AAGFASVNPLFMKYTPTNGMFSGQGSYGVRSFENFIDACCAVNAGTAQPRDFDDGSLATVHTTMQGTAILEAGRMSLDMDGRPMDIQY 410          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|1210516026|dbj|GAX25111.1| (hypothetical protein FisN_10Lh321 [Fistulifera solaris])

HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0
Identity = 258/405 (63.70%), Postives = 316/405 (78.02%), Query Frame = 0
Query:   15 MIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGL-DMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQ-ALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDF-DAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEE 416
            M+GTGEYTTGYV G+A+DSDK AGVVALTMFD+RRR K+ R+G+CG NG KFPGIR HM + IG  YKG+ D+  DTFP D  + P+AY  A+  F+ GD A IFTPDDTH+DIA+ C++ G+HV+VTKP+V+ L  H AL +AA+A  VLV VEVHKR DP Y DA+D+ + +LG F YMY+YMSQPKHQL+TF+AWAGK SDISYYLNSHH D+ EW + G +RPVRV+A ASTG+A  +  M TED+ITL+VQW+NR  S +LG  +YTSSWVAPKSDVHSQQRFFYMG  GE+NVDQAHRG T+++DE   GGF SVNPLFMKYTPT+G F+GQ  YG  SFE F+DA   + +GKA   DF D +LAT+ TT   TAILEAGR+SLD  G PM+I+Y ++
Sbjct:    1 MVGTGEYTTGYVGGKAADSDKGAGVVALTMFDMRRRQKVDRIGMCGVNGTKFPGIRQHMQRCIGDVYKGMGDLACDTFPRDDEIAPEAYKTAVASFQAGDVAVIFTPDDTHYDIAMECIQHGMHVMVTKPIVQNLQHHHALCEAAKAKNVLVAVEVHKRLDPFYADARDRARTSLGDFQYMYAYMSQPKHQLETFKAWAGKSSDISYYLNSHHIDWSEWTLSGIARPVRVTATASTGIAHSK-GMPTEDSITLTVQWENR-QSGALGCAVYTSSWVAPKSDVHSQQRFFYMGSKGEINVDQAHRGCTVSTDE---GGFASVNPLFMKYTPTNGMFSGQSSYGVKSFENFIDACAAVNAGKAQPSDFDDGSLATVHTTLQGTAILEAGRKSLDRDGSPMDILYDKD 400          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|1132233732|ref|WP_075901900.1| (oxidoreductase [Moorea bouillonii] >gi|1130578852|gb|OLT61088.1| oxidoreductase [Moorea bouillonii PNG])

HSP 1 Score: 515.768 bits (1327), Expect = 3.800e-179
Identity = 244/405 (60.25%), Postives = 308/405 (76.05%), Query Frame = 0
Query:   12 DMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDFDAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEE 416
            D+L+IGTGEY TG+VHG A++SDKSAGVVAL +FDLR RGK+ ++ LCG +GK+FPGIR H  + I   Y+G+D ++ TFP D   +PQAY  A+EK KPG    + TPDDTHF+IA+  +++G+HVLV KP+VKTLAEH+ L +A +   VLV +E+HKRFDP+Y DA+D+ ++ G FSYM SYMSQP+ QL+TF  WAG+ SDISYYLNSHH D  +W +  R+RP++V+ALA+TGVA  +  +DTEDTITL+VQW+N   S +LG  ++T+SW+APKSDVHSQQRFFYMGH GE+ VDQAHRGYT A+     GG+ S+NPLFMKY P+DG+FAGQ  YGY S E FVDAV  I  GKA   DFD  LAT   T  TTAILEAGR SLD+GG P+EI Y  +
Sbjct:    4 DILVIGTGEYVTGFVHGAAANSDKSAGVVALGLFDLRSRGKVEQISLCGRDGKRFPGIRHHFAEQISSRYQGIDASVHTFPDDNDYNPQAYQTAIEKMKPGSGVIVVTPDDTHFEIAMTAIRQGMHVLVAKPLVKTLAEHQKLIEAGKQHNVLVGIEMHKRFDPMYSDARDRARSYGDFSYMSSYMSQPRSQLNTFGQWAGRSSDISYYLNSHHIDLLDWMIGDRARPIQVNALAATGVAKTELGIDTEDTITLTVQWENI-ESRNLGISIHTASWIAPKSDVHSQQRFFYMGHQGELQVDQAHRGYTTATVS---GGYASINPLFMKYEPSDGKFAGQGAYGYQSLERFVDAVGSINEGKAEPKDFDNILATAARTLQTTAILEAGRLSLDSGGLPVEIKYSSQ 404          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|857978201|emb|CEO96176.1| (hypothetical protein PBRA_004866 [Plasmodiophora brassicae])

HSP 1 Score: 495.352 bits (1274), Expect = 6.222e-171
Identity = 247/412 (59.95%), Postives = 304/412 (73.79%), Query Frame = 0
Query:   12 DMLMIGTGEYTTGYV------HGEASDSDKSAGVVALTMFDLRRRGKIG-RLGLCGTNGKKFPGIRAHMDKAIGQTYKGLDMTMDTFPTDGAV-DPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQY-QMDTEDTITLSVQWQNRGPSPSLGTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMKYTPT-DGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDFDAALATIGTTALTTAILEAGRRSLDAGGRPMEIVY 413
            + L IGTGEYTTGYV       GE + SDK  GVVAL MFDLR RG+IG R+GLCGT+G KFP IRAH+ +AIG  YKG+ +  +TFP D    DPQAY  AL+KF PGD  +IFTPDDTH+ IALA ++RG+HV++TKP VKT+ EH +L   A    V+V+VEVHKR+DP+Y DA+++I+ LGPF+Y Y+YMSQPK QL TF++WAG  SDISYYLNSHH DFH WA+ G +RP  VSA+AS G+A     + + EDTITL+VQW N     S GT +YT+SW A K+DVHSQQRFFY+G  GEV+VDQAHRGYT A+D     GF SVNPL+M+Y P   GRF GQ+GYGY SF  FV+AV  ++ G +S  DF+A L T+ +T   TAILEAGRRSLD GGR +EI+Y
Sbjct:    6 NCLCIGTGEYTTGYVCSVGQRDGEVTQSDKRCGVVALVMFDLRARGQIGPRVGLCGTSGIKFPAIRAHLQRAIGDVYKGIGVHCETFPADDVTRDPQAYEKALDKFSPGDIVSIFTPDDTHYAIALAAIERGMHVILTKPPVKTVVEHLSLVKRAREKNVIVVVEVHKRYDPVYDDARNRIRNLGPFNYFYAYMSQPKGQLATFKSWAGISSDISYYLNSHHIDFHAWALTGIARPTLVSAVASNGIANKVLGRQNVEDTITLTVQWVNLAAPHSAGTAVYTASWAAAKADVHSQQRFFYLGASGEVSVDQAHRGYTAATD---ADGFASVNPLYMRYVPDHQGRFVGQQGYGYQSFSRFVEAVHMVREGSSSPQDFNAELPTLESTLTVTAILEAGRRSLDNGGRLVEILY 414          
BLAST of EWM28567.1 vs. NCBI_GenBank
Match: gi|551561574|ref|XP_005767620.1| (hypothetical protein EMIHUDRAFT_445625 [Emiliania huxleyi CCMP1516] >gi|551597519|ref|XP_005780859.1| hypothetical protein EMIHUDRAFT_434762 [Emiliania huxleyi CCMP1516] >gi|485618135|gb|EOD15191.1| hypothetical protein EMIHUDRAFT_445625 [Emiliania huxleyi CCMP1516] >gi|485633559|gb|EOD28430.1| hypothetical protein EMIHUDRAFT_434762 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 491.5 bits (1264), Expect = 3.719e-169
Identity = 264/459 (57.52%), Postives = 320/459 (69.72%), Query Frame = 0
Query:   10 PVDMLMIGTGEYTTGYVHGEASDSDKSAGVVALTMFDLRRRGKIGRLGLCGTNGKKFPGIRAHMDKAIGQTYKGLD-MTMDTFPTDGAVDPQAYIAALEKFKPGDAATIFTPDDTHFDIALACVKRGLHVLVTKPVVKTLAEHRALKDAAEASGVLVMVEVHKRFDPIYLDAKDKIQALGPFSYMYSYMSQPKHQLDTFRAWAGKGSDISYYLNSHHTDFHEWAMQGRSRPVRVSALASTGVATCQYQMDTEDTITLSVQWQNRGPSPSL-----------------------GTGLYTSSWVAPKSDVHSQQRFFYMGHGGEVNVDQAHRGYTLASDELGGGGFKSVNPLFMK--YTPTDGRFAGQRGYGYLSFEAFVDAVVDIQSGKASVGDFDAALATIGTTALTTAILEAGRRSLDAGGRPMEIVYGEEADRTWSAPEGGEENHPFPIDIRPVEF 442
            P  +LM+GTGEYTTG+    ASDSDKS GVVAL M DLRRRGK+GRLG+CGT+G+K P IRAHM  A+G  Y G+D   ++T+P DG VD +AY+AA + F PGD A IFTPDDTH  IA AC+ RG+HVL+TKP VKTL EHR+L  AA  +G L  VEVHKR+DPIY DA+D++ +LG FSY  ++MSQPKHQLDTF+AWAGK SDISYYLNSHH DFHEW ++GR+RP  V+ALAS GVA+ +     EDTITL+V+W+N+   P+L                       G  +YTSSW+A ++DVHSQQR+FYMGHGGE++VDQAHRGYT+A D   G GF SVNPLF K         F GQR YGYLSFEAFVDA     +G+A   D+D  L T+ TTA  TAILEAGRRSLDA GR ME+VY + A  T             P+ IR ++F
Sbjct:    2 PPAVLMLGTGEYTTGFTGSGASDSDKSTGVVALVMLDLRRRGKVGRLGMCGTDGRKLPAIRAHMKAALGDVYSGIDPSCIETWPPDGVVDREAYVAAADAFGPGDVAVIFTPDDTHGPIARACLARGMHVLLTKPPVKTLEEHRSLAAAAADAGRLCAVEVHKRYDPIYRDARDRVPSLGAFSYFTAHMSQPKHQLDTFKAWAGKSSDISYYLNSHHVDFHEWCLRGRARPEAVTALASDGVASERVGRPCEDTITLAVRWRNKLEPPALQEENQGREGRQEGAAARSFTGSAGHAVYTSSWIAARADVHSQQRWFYMGHGGEMSVDQAHRGYTVAQD---GKGFASVNPLFWKPARDALTREFTGQRCYGYLSFEAFVDAAAACNAGRAVPEDYDGVLPTVATTAGATAILEAGRRSLDASGRTMELVYADAAAET-------------PVGIRALDF 444          
The following BLAST results are available for this feature:
BLAST of EWM28567.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110985|gb|EWM28567.1|0.000e+0100.00Oxidoreductase [Nannochloropsis gaditana][more]
gi|299471361|emb|CBN79316.1|0.000e+067.35conserved unknown protein [Ectocarpus siliculosus][more]
gi|224009520|ref|XP_002293718.1|0.000e+062.82predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1072232827|gb|OEU17558.1|0.000e+063.46NAD(P)-binding protein [Fragilariopsis cylindrus C... [more]
gi|1210519967|dbj|GAX21191.1|0.000e+061.72hypothetical protein FisN_10Hh321 [Fistulifera sol... [more]
gi|219121226|ref|XP_002185841.1|0.000e+062.56predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210516026|dbj|GAX25111.1|0.000e+063.70hypothetical protein FisN_10Lh321 [Fistulifera sol... [more]
gi|1132233732|ref|WP_075901900.1|3.800e-17960.25oxidoreductase [Moorea bouillonii] >gi|1130578852|... [more]
gi|857978201|emb|CEO96176.1|6.222e-17159.95hypothetical protein PBRA_004866 [Plasmodiophora b... [more]
gi|551561574|ref|XP_005767620.1|3.719e-16957.52hypothetical protein EMIHUDRAFT_445625 [Emiliania ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2076rna2076Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications