EWM28615.1, cds2066 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|585111033|gb|EWM28615.1| (protein of unknown function DUF4033 [Nannochloropsis gaditana]) HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
Query: 1 MTGMRLPMVAVCVMATSTICAAFLLPSPSPRAITSCRMGAMTSNPSPVQPRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMAPWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTALQEKRLDRGTVCGK 264
MTGMRLPMVAVCVMATSTICAAFLLPSPSPRAITSCRMGAMTSNPSPVQPRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMAPWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTALQEKRLDRGTVCGK
Sbjct: 1 MTGMRLPMVAVCVMATSTICAAFLLPSPSPRAITSCRMGAMTSNPSPVQPRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMAPWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTALQEKRLDRGTVCGK 264
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|298713846|emb|CBJ33737.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 299.671 bits (766), Expect = 9.628e-99 Identity = 138/198 (69.70%), Postives = 162/198 (81.82%), Query Frame = 0
Query: 49 QPRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMAPWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCS 246
Q RPPL +FY+ESLLDKVALALFR LVQ+EIGY S +PGY GLI+EA++Y + G + EDQQ MV L TIAGP VPPVY+ FMAPW WAPFLTA FTPPFFKFLVGPN+ D R D GGV+ ERCRFLEETNCKGLC +MCK+PT++FF+ETLGL M M PD+DTYECRLSFGL A+E+D ++P+GCL+GCS
Sbjct: 87 QLRPPLAADFYSESLLDKVALALFRVLVQKEIGYKSEEPGYAGLIDEAQNYMVIQGASVEDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTAFFTPPFFKFLVGPNKLDARKDDTPGGVFVERCRFLEETNCKGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLESPAMEEDDTVPRGCLSGCS 284
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|298714305|emb|CBJ33899.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 291.967 bits (746), Expect = 9.488e-97 Identity = 136/198 (68.69%), Postives = 160/198 (80.81%), Query Frame = 0
Query: 49 QPRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMAPWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCS 246
Q RPPL +F +ESLLDKVALALFR LVQ+EIGY S +PGY GLI+EA++Y + G + EDQQ M L TIAGP VPPVY+ FMAPW WAPFLTA FTPPFFKFLVGPN+ D R D GGV+ ERCRFLEETNCKGLC +MCK+PT++FF+ETLGL M M PD+DTYECRLSFGL A+E+D ++P+GCL+GCS
Sbjct: 8 QLRPPLAADFCSESLLDKVALALFRVLVQKEIGYKSEEPGYAGLIDEAQNYMVIQGASVEDQQDMAVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTAFFTPPFFKFLVGPNKLDARKDDTPGGVFVERCRFLEETNCKGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLESPAMEEDDTVPRGCLSGCS 205
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|873238298|emb|CEL96006.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 224.172 bits (570), Expect = 6.048e-69 Identity = 104/209 (49.76%), Postives = 141/209 (67.46%), Query Frame = 0
Query: 56 DNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMAPWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTALQEKRLDRGTVCGK 264
D FYA + +++AL LFR VQR+IGY S GYDGLI+EA+H+ L T Q+ MV L +++GPL+P +RTF+APW + P +T+I TP FLVGP + R+DG+ GGV +RCRFL T CKGLCL+MCK P Q +F++ LGLDMTM P++ T EC+LSFGLAP +E+D S+P CL C + L ++ DR +C +
Sbjct: 96 DAFYAMNAWERMALGLFREQVQRQIGYASPMEGYDGLIDEAKHFMLVQNATTSLQEAMVLNVLRSLSGPLLPIFFRTFVAPWPYGPLMTSIVTPLLLSFLVGPVEVNRREDGRLGGVLVKRCRFLAATKCKGLCLNMCKSPAQTYFRDVLGLDMTMRPNFATCECQLSFGLAPPPIEEDVSVPSDCLGQCGWKSQLMQRPGDREMICSR 304
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|551651416|ref|XP_005828489.1| (hypothetical protein GUITHDRAFT_164374 [Guillardia theta CCMP2712] >gi|428172601|gb|EKX41509.1| hypothetical protein GUITHDRAFT_164374 [Guillardia theta CCMP2712]) HSP 1 Score: 219.164 bits (557), Expect = 9.125e-66 Identity = 108/221 (48.87%), Postives = 143/221 (64.71%), Query Frame = 0
Query: 50 PRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMA---------PWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTALQEKRLDRGTV 261
P LP+ Y ES LDKV L++FR LV +E G+ S K G GL+E+ R Y L+PG TAE Q +MV LA + P++PP Y+ FM+ PW WA +LT+ TP FF FLVGP+R + R DGQ GG+ E+C+FL+E+ CK LC++ CKLP QQFF + LGL +T+TP+++T EC+ SFG P V+ DP IP+GCL+ C AL R R V
Sbjct: 178 PSCSLPNVTYTESPLDKVLLSIFRSLVAKETGFQSEKEGILGLLEQGREYLLRPGQTAEAQNRMVYNTLAGLLTPVMPPFYKVFMSGIIAGKQYGPWPWAAWLTSFVTPTFFGFLVGPSRPNRRKDGQLGGLVVEKCKFLQESGCKSLCINQCKLPAQQFFSQELGLPLTVTPNFETQECQWSFGEHPIDVDKDPRIPRGCLSECPTREALVSMRESRSCV 398
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|1210529473|dbj|GAX11909.1| (hypothetical protein FisN_17Lh183 [Fistulifera solaris]) HSP 1 Score: 218.394 bits (555), Expect = 7.108e-65 Identity = 104/215 (48.37%), Postives = 141/215 (65.58%), Query Frame = 0
Query: 54 LPDNFYAESLLDKVALALFRRLVQREIGYVSS-KPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMA----------------PWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTAL 251
L D Y ES LD+ L LFR V++ G VSS K G GL+E+ + + LQ G TAE Q KMVK+ L + P++PP YR FM+ PWF+AP+LT+ TP FF FLVGP+R ++R DGQ GG+ E+C+FL+E+ CKGLCLH CK+P Q+FF++ LGL +T++P++ T EC+ SFG P V++DP+ P GCL GC + AL
Sbjct: 232 LEDMVYTESALDQFLLWLFRNFVEKNTGGVSSTKAGIQGLLEQGQKFMLQEGQTAESQHKMVKSTLGDLMTPVLPPFYRIFMSGIVPKLGNDMDGKQLGPWFYAPWLTSFVTPTFFGFLVGPSRPNLRKDGQLGGLIVEKCKFLQESGCKGLCLHQCKIPAQEFFQQELGLPLTVSPNFVTQECQWSFGETPLPVQEDPTFPAGCLAGCKSRDAL 446
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|219118645|ref|XP_002180091.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408348|gb|EEC48282.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 208.764 bits (530), Expect = 2.679e-61 Identity = 102/215 (47.44%), Postives = 139/215 (64.65%), Query Frame = 0
Query: 54 LPDNFYAESLLDKVALALFRRLVQREIGYVSS-KPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMA----------------PWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTAL 251
+ D Y ES LDK+ L++FR LV + G V+S K G GL+++ R + L+PG T E Q KMV LA + P++PP Y FM+ PWF+AP+LT++ TP FF FLVGP+R + R DGQ GG+ E+C+FL+++ CKGLCLH CKLP QQFFK+ LGL +T++P++ T EC+ SFG +P +DPS P GCL GC + L
Sbjct: 226 IEDMKYNESPLDKLLLSIFRNLVTKNTGGVTSPKEGILGLVDQGRTFMLKPGQTPEAQHKMVSDTLAGLMTPVLPPFYGIFMSGIVPKIGTEFDGKQFGPWFYAPWLTSVVTPTFFGFLVGPSRPNHRKDGQLGGLVVEKCKFLQKSGCKGLCLHQCKLPAQQFFKDELGLPLTVSPNFVTQECQWSFGESPLPASEDPSFPTGCLVGCESRKTL 440
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|224013208|ref|XP_002295256.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969218|gb|EED87560.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 204.527 bits (519), Expect = 1.570e-59 Identity = 104/222 (46.85%), Postives = 139/222 (62.61%), Query Frame = 0
Query: 50 PRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSK-PGYDGLIEEARHY---QLQPGVTAED----QQKMVKTCLATIAGPLVPPVYRTFMA----------------PWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSA 247
P L D Y +S LDKV L++FR+LV G + + PG GL+ + R + +L GV+ ED Q MVK L + P++PP YR FM+ PWF+APFLT++ TP FF FLVGP+R + R DGQ GG+ E+C+FL+E+ CKGLCLH CK+P Q+FFKE LGLD+T+ P++ T EC+ SFG P E+DPS P+GCL GC +
Sbjct: 220 PDCELDDMTYNDSSLDKVLLSIFRKLVAENTGGIQNDTPGIKGLLIQGRQFMTKELPEGVSYEDHTIAQHTMVKNTLGGLMTPVLPPFYRIFMSGIVPKLGTEFDGKQLGPWFYAPFLTSMVTPIFFGFLVGPSRPNRRADGQRGGLVVEKCKFLQESGCKGLCLHQCKIPAQEFFKEELGLDLTVKPNFVTQECQWSFGETPLPPEEDPSFPRGCLVGCES 441
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|397616815|gb|EJK64149.1| (hypothetical protein THAOC_15145, partial [Thalassiosira oceanica]) HSP 1 Score: 204.142 bits (518), Expect = 5.118e-59 Identity = 103/226 (45.58%), Postives = 142/226 (62.83%), Query Frame = 0
Query: 54 LPDNFYAESLLDKVALALFRRLVQREIGYVSSK-PGYDGLIEEARHY---QLQPGVT----AEDQQKMVKTCLATIAGPLVPPVYRTFMA----------------PWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTALQEKR 255
L D ++ES LDK+ L++FR V G V+S PG GL+ + R Y +L GVT +++Q MVK LA + P++PP YR FM+ PWF+AP+LT I TP FF FLVGP+R + R DGQ GG+ E+C+FL+E+ CKGLCLH CK+P Q FF+E LGLD+T+ P++ T EC+ SFG P ++DPS P GCL GC + A+ +++
Sbjct: 267 LEDMKFSESPLDKILLSIFRSQVTENTGGVTSDIPGIKGLLAQGREYMTKELPEGVTYAEHSKEQNTMVKKTLAALMTPVLPPFYRIFMSGIVPKLGTEWDGKQIGPWFYAPWLTTIVTPIFFGFLVGPSRPNRRSDGQRGGLVVEKCKFLQESGCKGLCLHQCKIPAQDFFREELGLDLTVKPNFVTQECQWSFGEKPLTPDEDPSFPNGCLVGCESRKAMADRK 492
BLAST of EWM28615.1 vs. NCBI_GenBank
Match: gi|1210528131|dbj|GAX13246.1| (hypothetical protein FisN_17Hh183 [Fistulifera solaris]) HSP 1 Score: 174.096 bits (440), Expect = 3.445e-48 Identity = 79/162 (48.77%), Postives = 108/162 (66.67%), Query Frame = 0
Query: 106 TAEDQQKMVKTCLATIAGPLVPPVYRTFMA----------------PWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTAL 251
TAE Q MVK+ L + P++PP YR FM+ PWF+AP+LT+ TP FF FLVGP+R ++R DGQ GG+ E+C+FL+E+ CKGLCLH CK+P Q+FF++ LGL +T++P++ T EC+ SFG P V +DP+ P GCL GC + AL
Sbjct: 246 TAEAQHTMVKSTLGNLMTPVLPPFYRIFMSGFVPKLGTDMDGKQLGPWFYAPWLTSFVTPTFFGFLVGPSRPNLRKDGQLGGLIVEKCKFLQESGCKGLCLHQCKIPAQEFFQQELGLPLTVSPNFVTQECQWSFGETPLPVNEDPTFPAGCLAGCKSRDAL 407 The following BLAST results are available for this feature:
BLAST of EWM28615.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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