EWM28561.1, cds2063 (CDS) Nannochloropsis gaditana

Overview
NameEWM28561.1
Unique Namecds2063
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:823767..823870 -
Alignment locationCM002458.1:822418..823461 -
Alignment locationCM002458.1:822191..822332 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28561.1
Productwd repeat domain phosphoinositide-interacting protein 3
Orig transcript idgnl|cribi|Naga_100009g91.604.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:823767..823870 -
CM002458.1supercontigCM002458.1:822418..823461 -
CM002458.1supercontigCM002458.1:822191..822332 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|585110979|gb|EWM28561.1| (wd repeat domain phosphoinositide-interacting protein 3 [Nannochloropsis gaditana])

HSP 1 Score: 884.404 bits (2284), Expect = 0.000e+0
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEEVKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLVSHQSLHLHNPKRPSLPEIAMGDVVGMPTPFKLCDRTLTSLVLIGMQN 429
            MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEEVKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLVSHQSLHLHNPKRPSLPEIAMGDVVGMPTPFKLCDRTLTSLVLIGMQN
Sbjct:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEEVKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLVSHQSLHLHNPKRPSLPEIAMGDVVGMPTPFKLCDRTLTSLVLIGMQN 429          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|669164872|ref|XP_008617998.1| (hypothetical protein SDRG_13680 [Saprolegnia diclina VS20] >gi|530730359|gb|EQC28601.1| hypothetical protein SDRG_13680 [Saprolegnia diclina VS20])

HSP 1 Score: 501.516 bits (1290), Expect = 2.395e-174
Identity = 239/385 (62.08%), Postives = 297/385 (77.14%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEEVKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLVSHQ 385
            M++M+L+++Q+NELLFVGFNQDYGCFACGTD GFRIYN DPF+ETFRR F +GGIGIVEMLFR N++A+VGGGRNPR+PPNKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + T+ NP+GLVAL P + NTVLACPG+++G+VR+ELYD RK+TLI AHE++L+QM LNL+GTRLATASDKGTL+R+FDT SG+L+QELRRG D+AEIYS+ F+ +S ++ACSS K TVHIFA+  EG  G  EG           S +G   SS ++  +       +  +N+ S  SFMR LL    P+YF+SEWSFAQ R  E RT+ AFGV  +T+I VGADG++  + F + GE ER SY K +  +
Sbjct:    1 MAAMNLSREQQNELLFVGFNQDYGCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLLDHIETIANPKGLVALCPSSTNTVLACPGVSRGTVRIELYDQRKTTLITAHEADLSQMCLNLEGTRLATASDKGTLIRIFDTQSGQLMQELRRGADKAEIYSVCFSPNSQYLACSSDKHTVHIFALTKEG--GGAEGAAPLSTSAHRNSQTGQRYSSGSLTQSTPIAREDDSTENSKSNFSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGVDKNTIIVVGADGSFYKAVFDANGECERTSYSKFIQTE 379          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|813164822|ref|XP_012203471.1| (hypothetical protein SPRG_08852 [Saprolegnia parasitica CBS 223.65] >gi|641531857|gb|KDO25911.1| hypothetical protein SPRG_08852 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 499.204 bits (1284), Expect = 2.063e-173
Identity = 238/385 (61.82%), Postives = 296/385 (76.88%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEEVKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLVSHQ 385
            M++M+L+++Q+NELLFVGFNQDYGCFACGTD GFRIYN DPF+ETFRR F +GGIGIVEMLFR N++A+VGGGRNPR+PPNKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + T+ NP+GLVAL P + NTVLACPG+++G+VR+ELYD RK+TLI AHE++L+QM LNL+GTRLATASDKGTL+R+FDT SG+L QELRRG D+AEIYS+ F+ +S ++ACSS K TVHIFA+  EGG   G         +   S +G   SS ++  +       +  +N+ S  SFMR LL    P+YF+SEWSFAQ R  E RT+ AFGV  +T+I VGADG++  + F + GE ER SY K +  +
Sbjct:    1 MAAMNLSREQQNELLFVGFNQDYGCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLLDHIETIANPKGLVALCPSSTNTVLACPGVSRGTVRIELYDQRKTTLITAHEADLSQMCLNLEGTRLATASDKGTLIRIFDTQSGQLTQELRRGADKAEIYSVCFSPNSQYLACSSDKHTVHIFALTKEGGGADGAAPLSTSAHRN--SQTGQRYSSGSLTQSTPISREDDSTENSKSNFSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGVDKNTIIVVGADGSFYKAVFDANGECERTSYSKFIQAE 379          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|1173950422|gb|OQR98384.1| (hypothetical protein THRCLA_06731 [Thraustotheca clavata])

HSP 1 Score: 494.582 bits (1272), Expect = 1.611e-171
Identity = 238/386 (61.66%), Postives = 293/386 (75.91%), Query Frame = 0
Query:    4 MSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGG---NGSGEGGGGGGGKQGTRSDSG-AWSSSAAMGGTGGAGAGGEEVKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLVSHQ 385
            M+L+++Q+NELLFVGFNQDYGCFACGTD GFRIYN DPF+ETFRR F NGGIGIVEMLFR N++A+VGGGRNPR+PPNKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + T+ NP+GLVAL P + N VLACPG+++G+VR+ELYD RK+TLI AHE++L+QM LNL+GTRLATASDKGTL+R+FDT SG+L+QELRRG D+AEIYS+ F+ +S ++ACSS K TVHIFA+  EGG   +G             T  +SG A  S+ ++  +       E  +N+ S  SFMR  L    P+YF+SEWSFAQ R  E RT+ AFG   +T+I VGADG++  + F S GE ER SY K +  +
Sbjct:    1 MNLSREQQNELLFVGFNQDYGCFACGTDTGFRIYNCDPFKETFRRDFSNGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLLDHIETITNPKGLVALCPSSTNKVLACPGVSRGTVRIELYDQRKTTLITAHEADLSQMCLNLEGTRLATASDKGTLIRIFDTQSGQLMQELRRGADKAEIYSVCFSPNSQYLACSSDKHTVHIFALTKEGGGATDGLPSAPMATSAAALTHRNSGSARYSAGSLTQSAPIAREDENTENSKSNFSFMRGFL----PKYFSSEWSFAQFRVPETRTICAFGTDKNTIIVVGADGSFYKATFDSNGECERTSYSKFIQAE 382          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|1173948991|gb|OQR97069.1| (hypothetical protein ACHHYP_12726 [Achlya hypogyna])

HSP 1 Score: 494.197 bits (1271), Expect = 2.730e-171
Identity = 242/393 (61.58%), Postives = 300/393 (76.34%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSG--------EGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEEVKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLVSHQ 385
            M++M+L+++Q+NELLFVGFNQDYGCFACGTD GFRIYN DPF+ETFRR F +GGIGIVEMLFR N++A+VGGGRNPR+PPNKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + T+ NP+GLVAL P   NTVLACPG+++G+VR+ELYD RK+TLI AHE++L+QM LNL+GTRLATASDKGTL+R+FDT SG+L QELRRG D+AEIYS+ F+ +S ++ACSS K TVHIFA+  EGG   G           G  G + G R  SG+ + S++M          +  +N+ S  SFMR LL    P+YF+SEWSFAQ R  E RT+ AFGV  +T+I VGADG++  + F + GE ER SY K + ++
Sbjct:    1 MAAMNLSREQQNELLFVGFNQDYGCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLLDHIETITNPKGLVALCPSATNTVLACPGVSRGTVRIELYDQRKTTLITAHEADLSQMCLNLEGTRLATASDKGTLIRIFDTQSGQLTQELRRGADKAEIYSVCFSPNSQYLACSSDKHTVHIFALTKEGGGADGLPPAPLSTSAAGHRGSQSGIRYSSGSMTQSSSMARE------DDNTENSKSNFSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGVDKNTIIVVGADGSFYKAVFDTNGECERTSYSKFIQNE 383          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|675165863|ref|XP_008891816.1| (hypothetical protein PPTG_02483 [Phytophthora parasitica INRA-310] >gi|675165869|ref|XP_008891819.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566027058|gb|ETI49969.1| hypothetical protein F443_06369 [Phytophthora parasitica P1569] >gi|567964370|gb|ETK89858.1| hypothetical protein L915_06253 [Phytophthora parasitica] >gi|567964371|gb|ETK89859.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567993073|gb|ETL43258.1| hypothetical protein L916_06189 [Phytophthora parasitica] >gi|567993074|gb|ETL43259.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568022369|gb|ETL96445.1| hypothetical protein L917_06063 [Phytophthora parasitica] >gi|568022370|gb|ETL96446.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568052733|gb|ETM49602.1| hypothetical protein L914_06184 [Phytophthora parasitica] >gi|568052734|gb|ETM49603.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568107958|gb|ETN22582.1| hypothetical protein PPTG_02483 [Phytophthora parasitica INRA-310] >gi|568107959|gb|ETN22583.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570330741|gb|ETO78689.1| hypothetical protein F444_06433 [Phytophthora parasitica P1976] >gi|570330742|gb|ETO78690.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570954490|gb|ETP19747.1| hypothetical protein F441_06375 [Phytophthora parasitica CJ01A1] >gi|570954491|gb|ETP19748.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570989444|gb|ETP47670.1| hypothetical protein F442_06414 [Phytophthora parasitica P10297] >gi|570989445|gb|ETP47671.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 485.337 bits (1248), Expect = 6.625e-168
Identity = 235/384 (61.20%), Postives = 294/384 (76.56%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEE--VKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLV 382
            MS+M+L+++Q+NELLFVGFNQD GCFACGTD+GF+I+N DPF+ETF R F NGGIGIVEMLFR N++A+VGGGRNPR+PPNKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + T+ NP+GL AL P+ +NTVLACPG+ +G+VR+ELYD RK+TLI AHE+EL+Q+ LNLDGTRLATASDKGTL+R+FDT SG++ QELRRG DRAEIYS+ F+ ++  +ACSS KGTVH+F++ AEG   S        G   ++S    +S+       G A   GEE   +N+ S LSFMR LL    P+YF+SEWSFAQ R  E RT+ AFG   +T++ VGADG++  + F + GE +  SY K +
Sbjct:    1 MSAMNLSREQQNELLFVGFNQDSGCFACGTDSGFKIFNCDPFKETFHRDFSNGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETIANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRIFDTQSGQITQELRRGADRAEIYSICFSPTAPLLACSSDKGTVHVFSLTAEGSGQSFSSDPTTMGNVPSQSIPTHYSA-------GTAPRSGEEDGTENSKSSLSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGTEKNTIVVVGADGSFYKAVFDANGECQNTSYSKFI 373          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|301094199|ref|XP_002997943.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262109729|gb|EEY67781.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 484.182 bits (1245), Expect = 1.659e-167
Identity = 237/384 (61.72%), Postives = 292/384 (76.04%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEE--VKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLV 382
            MS+M+L+++Q+NELLFVGFNQD GCFACGTD+GF+I+N DPF+ETF R F NGGIGIVEMLFR N++A+VGGGRNPR+PPNKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + T+ NP+GL AL P+ +NTVLACPG+ +G+VR+ELYD RK+TLI AHE+EL+Q+ LNLDGTRLATASDKGTL+R+FDT SG++ QELRRG DRAEIYS+ F+ ++  +ACSS KGTVH+F++ AE   GSG          G        S  AA    G A   GEE   +N+ S LSFMR LL    P+YF+SEWSFAQ R  E RT+ AFG   +T++ VGADG++  + F + GE +  SY K +
Sbjct:    1 MSAMNLSREQQNELLFVGFNQDSGCFACGTDSGFKIFNCDPFKETFHRDFSNGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETIANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRIFDTQSGQITQELRRGADRAEIYSICFSPTAPLLACSSDKGTVHVFSLTAE---GSGHSFSSDPTTMGNVPSQSMPSHFAA----GSAPRSGEEDGTENSKSSLSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGTEKNTIVVVGADGSFYKAVFDANGECQNTSYSKFI 373          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|1214710193|gb|OWZ21306.1| (hypothetical protein PHMEG_0004166 [Phytophthora megakarya])

HSP 1 Score: 482.256 bits (1240), Expect = 7.914e-167
Identity = 233/384 (60.68%), Postives = 293/384 (76.30%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEE--VKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLV 382
            MS+M+L+++Q+NELLFVGFNQD GCFACGTD+GF+I+N DPF+ETF R F NGGIGIVEMLFR N++A+VGGGRNPR+PPNKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + T+ NP+GL AL P+ +NTVLACPG+ +G+VR+ELYD RK+TLI AHE+EL+Q+ LNLDGTRLATASDKGTL+R+FDT SG++ QELRRG DRAEIYS+ F+ ++  +ACSS KGTVH+F++ AEG   S            ++S    +S+       G A   GE+   +N+ S LSFMR LL    P+YF+SEWSFAQ R  E RT+ AFG   +T++ VGADG++  + F + GE +  SY K +
Sbjct:    1 MSAMNLSREQQNELLFVGFNQDSGCFACGTDSGFKIFNCDPFKETFHRDFSNGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETIANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRIFDTQSGQITQELRRGADRAEIYSICFSPTAPLLACSSDKGTVHVFSLTAEGSGHSFSSDPTTMANVPSQSIPTHYSA-------GNAPRSGEDDGTENSKSSLSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGTEKNTIVVVGADGSFYKAVFDANGECQNTSYSKFI 373          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|953502207|emb|CEG36698.1| (Uncharacterized conserved protein, contains WD40 repeats [Plasmopara halstedii])

HSP 1 Score: 481.871 bits (1239), Expect = 1.294e-166
Identity = 237/384 (61.72%), Postives = 291/384 (75.78%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEE--VKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLV 382
            MS+M L+++Q+NELLFVGFNQD GCFACGTD GF+I+N DPF+ETF R F NGGIGIVEMLFR N++A+VGGGRNPR+P NKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + TL NP+GL AL P+ +NTVLACPG+ +G+VR+ELYD RK+TLI AHE+EL+Q+ LNLDGTRLATASDKGTL+R+FDT SG++ QELRRG DRAEIYS+ F+ ++  +ACSS KGTVH+F++ AE   GSG+         G        S  AA    G A   GEE   +N+ S LSFMR LL    P+YF+SEWSFAQ R  E RT+ AFG+  +T++ VGADG++  + F + GE +  SY K +
Sbjct:    1 MSAMKLSREQQNELLFVGFNQDSGCFACGTDTGFKIFNCDPFKETFHRDFTNGGIGIVEMLFRCNILAIVGGGRNPRYPTNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETLANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRIFDTQSGQITQELRRGADRAEIYSICFSPTAPLLACSSDKGTVHVFSLTAE---GSGQSFSSELNSMGNVPSHTMPSHFAA----GSAPRNGEEDGTENSKSSLSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGMEKNTIVVVGADGSFYKAVFDANGECQNTSYSKFI 373          
BLAST of EWM28561.1 vs. NCBI_GenBank
Match: gi|695388622|ref|XP_009519227.1| (hypothetical protein PHYSODRAFT_353896 [Phytophthora sojae] >gi|348684124|gb|EGZ23939.1| hypothetical protein PHYSODRAFT_353896 [Phytophthora sojae])

HSP 1 Score: 481.485 bits (1238), Expect = 1.960e-166
Identity = 233/384 (60.68%), Postives = 293/384 (76.30%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAVGAEGGNGSGEGGGGGGGKQGTRSDSGAWSSSAAMGGTGGAGAGGEE--VKNATSGLSFMRSLLPQVTPRYFASEWSFAQVRGLEARTVVAFGVRDHTLICVGADGTYLVSNFASGGEAERVSYKKLV 382
            MS M+L+++Q+NELLFVGFNQD GCFACGTD+GF+I+N DPF+ETF R F NGGIGIVEMLFR N++A+VGGGRNPR+PPNKVMIWDDHQ+R +GELSFRSEVKAVKLRRDRVVVVL  KIYVY F DL L D + T+ NP+GL AL P+ +NTVLACPG+ +G+VR+ELYD RK+TLI AHE+EL+Q+ LNLDGTRLATASDKGTL+R+FDT SG++ QELRRG DRAEIYS+ F+ ++  +ACSS KGTVH+F++ AEG   S        G   ++S    +S+       G A   G++   +N+ S LSFMR LL    P+YF+SEWSFAQ R  E RT+ AFG   +T++ VGADG++  + F + GE +  SY K +
Sbjct:    1 MSVMNLSREQQNELLFVGFNQDSGCFACGTDSGFKIFNCDPFKETFHRDFSNGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETIANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRIFDTQSGQITQELRRGADRAEIYSICFSPTAPLLACSSDKGTVHVFSLTAEGSGHSFSSDPTTMGNVPSQSAPSHFSA-------GSAPRSGDDDGTENSKSSLSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGTEKNTIVVVGADGSFYKAVFDANGECQNTSYSKFI 373          
The following BLAST results are available for this feature:
BLAST of EWM28561.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110979|gb|EWM28561.1|0.000e+0100.00wd repeat domain phosphoinositide-interacting prot... [more]
gi|669164872|ref|XP_008617998.1|2.395e-17462.08hypothetical protein SDRG_13680 [Saprolegnia dicli... [more]
gi|813164822|ref|XP_012203471.1|2.063e-17361.82hypothetical protein SPRG_08852 [Saprolegnia paras... [more]
gi|1173950422|gb|OQR98384.1|1.611e-17161.66hypothetical protein THRCLA_06731 [Thraustotheca c... [more]
gi|1173948991|gb|OQR97069.1|2.730e-17161.58hypothetical protein ACHHYP_12726 [Achlya hypogyna... [more]
gi|675165863|ref|XP_008891816.1|6.625e-16861.20hypothetical protein PPTG_02483 [Phytophthora para... [more]
gi|301094199|ref|XP_002997943.1|1.659e-16761.72conserved hypothetical protein [Phytophthora infes... [more]
gi|1214710193|gb|OWZ21306.1|7.914e-16760.68hypothetical protein PHMEG_0004166 [Phytophthora m... [more]
gi|953502207|emb|CEG36698.1|1.294e-16661.72Uncharacterized conserved protein, contains WD40 r... [more]
gi|695388622|ref|XP_009519227.1|1.960e-16660.68hypothetical protein PHYSODRAFT_353896 [Phytophtho... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2071rna2071Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications