EWM28625.1, cds2060 (CDS) Nannochloropsis gaditana

Overview
NameEWM28625.1
Unique Namecds2060
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:816482..816492 -
Alignment locationCM002458.1:816001..816220 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28625.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g95.668.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:816482..816492 -
CM002458.1supercontigCM002458.1:816001..816220 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28625.1 vs. NCBI_GenBank
Match: gi|585111043|gb|EWM28625.1| (hypothetical protein Naga_100009g95 [Nannochloropsis gaditana])

HSP 1 Score: 159.458 bits (402), Expect = 1.149e-49
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 
Query:    1 MDARPRLRALARVQATSPGLEIPTYTAPKVIVLSFTQGYHPSRYKVHMICMLTVHLLNICEPHCNYKGLFLNILQI 76
            MDARPRLRALARVQATSPGLEIPTYTAPKVIVLSFTQGYHPSRYKVHMICMLTVHLLNICEPHCNYKGLFLNILQI
Sbjct:    1 MDARPRLRALARVQATSPGLEIPTYTAPKVIVLSFTQGYHPSRYKVHMICMLTVHLLNICEPHCNYKGLFLNILQI 76
The following BLAST results are available for this feature:
BLAST of EWM28625.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111043|gb|EWM28625.1|1.149e-49100.00hypothetical protein Naga_100009g95 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2068rna2068Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications