EWM28639.1, cds2044 (CDS) Nannochloropsis gaditana

Overview
NameEWM28639.1
Unique Namecds2044
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:780783..781112 -

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Properties
Property NameValue
Protein idEWM28639.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100182g15.949.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:780783..781112 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM28639.1 vs. NCBI_GenBank
Match: gi|585111058|gb|EWM28639.1| (hypothetical protein Naga_100182g15 [Nannochloropsis gaditana])

HSP 1 Score: 222.246 bits (565), Expect = 1.703e-73
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 
Query:    1 MDLSRSHWSSTCSPRGKRAFCSVQNLCGAWEWFRRKAGLAFRARIRGVCKEEGATATRSWLGEMSIAHVAFVLFTSQNFVSWAGYTLLLCGKRVKAKGHETRKRVQRKR 109
            MDLSRSHWSSTCSPRGKRAFCSVQNLCGAWEWFRRKAGLAFRARIRGVCKEEGATATRSWLGEMSIAHVAFVLFTSQNFVSWAGYTLLLCGKRVKAKGHETRKRVQRKR
Sbjct:    1 MDLSRSHWSSTCSPRGKRAFCSVQNLCGAWEWFRRKAGLAFRARIRGVCKEEGATATRSWLGEMSIAHVAFVLFTSQNFVSWAGYTLLLCGKRVKAKGHETRKRVQRKR 109
The following BLAST results are available for this feature:
BLAST of EWM28639.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Position :
0
Zoom :
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01SequenceEWM28639.1
Match NameE-valueIdentityDescription
gi|585111058|gb|EWM28639.1|1.703e-73100.00hypothetical protein Naga_100182g15 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2052rna2052Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications