EWM28637.1, cds2037 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|585111056|gb|EWM28637.1| (er to golgi transport-related protein [Nannochloropsis gaditana]) HSP 1 Score: 1033.48 bits (2671), Expect = 0.000e+0 Identity = 503/503 (100.00%), Postives = 503/503 (100.00%), Query Frame = 0 Query: 1 MVIGPNSPDENVTSPSASETSKSYTAESYIASNANLMPQSTALATFKDIEAKVGWNPSLLASPYSQTVRYLQVTDQDARPAPAKGIWVDVVGRNNRAVRRNIGLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSCLSGHQGLLVDVKWVRKSFLQKAPHIAELRGRPPRAFSSANAASLATSRTVLLTAHRLPAITGHNQLPTLYKKLEDFLGLDSKMLPSDALKSPQGVIRDLTYATTRAEKRRLMKLLQEKEEEEIRKRRIQEQREAAARPLLELAEKARQALLASLPHKRHLVHRGKRGTAPPPLDSTRRALSTPLPKTDASRRPKIGSSTTVWPSHHLLLTTMSPETSLYINVLSISYPQTPLPLPVPEMSLRLPTLTSRDEDRIESLESRAQSHDHGSSPTNDPQSVLRTNLGTSTAYTHENDGGSTGCREDMDAVNLIDECMKLVDESSSTKFAQSLPHFLQNVKLYFEAMAVSDEKGLRARGGVTW 503 MVIGPNSPDENVTSPSASETSKSYTAESYIASNANLMPQSTALATFKDIEAKVGWNPSLLASPYSQTVRYLQVTDQDARPAPAKGIWVDVVGRNNRAVRRNIGLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSCLSGHQGLLVDVKWVRKSFLQKAPHIAELRGRPPRAFSSANAASLATSRTVLLTAHRLPAITGHNQLPTLYKKLEDFLGLDSKMLPSDALKSPQGVIRDLTYATTRAEKRRLMKLLQEKEEEEIRKRRIQEQREAAARPLLELAEKARQALLASLPHKRHLVHRGKRGTAPPPLDSTRRALSTPLPKTDASRRPKIGSSTTVWPSHHLLLTTMSPETSLYINVLSISYPQTPLPLPVPEMSLRLPTLTSRDEDRIESLESRAQSHDHGSSPTNDPQSVLRTNLGTSTAYTHENDGGSTGCREDMDAVNLIDECMKLVDESSSTKFAQSLPHFLQNVKLYFEAMAVSDEKGLRARGGVTW Sbjct: 1 MVIGPNSPDENVTSPSASETSKSYTAESYIASNANLMPQSTALATFKDIEAKVGWNPSLLASPYSQTVRYLQVTDQDARPAPAKGIWVDVVGRNNRAVRRNIGLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSCLSGHQGLLVDVKWVRKSFLQKAPHIAELRGRPPRAFSSANAASLATSRTVLLTAHRLPAITGHNQLPTLYKKLEDFLGLDSKMLPSDALKSPQGVIRDLTYATTRAEKRRLMKLLQEKEEEEIRKRRIQEQREAAARPLLELAEKARQALLASLPHKRHLVHRGKRGTAPPPLDSTRRALSTPLPKTDASRRPKIGSSTTVWPSHHLLLTTMSPETSLYINVLSISYPQTPLPLPVPEMSLRLPTLTSRDEDRIESLESRAQSHDHGSSPTNDPQSVLRTNLGTSTAYTHENDGGSTGCREDMDAVNLIDECMKLVDESSSTKFAQSLPHFLQNVKLYFEAMAVSDEKGLRARGGVTW 503
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|1045445375|gb|OCF39234.1| (hypothetical protein I317_06952 [Kwoniella heveanensis CBS 569]) HSP 1 Score: 73.9442 bits (180), Expect = 3.298e-10 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0 Query: 87 WVDVVGRNNRAVRRNI----GLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSC 145 WV VVG + VR N G+LRFLGP F +G WAG+E++G NDGSV+GV YF+C Sbjct: 167 WVPVVGEH---VRINSMGYEGVLRFLGPTQFKEGVWAGVELEGGFAGKGKNDGSVEGVSYFTC 226
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|1045443239|gb|OCF37332.1| (hypothetical protein I316_01241 [Kwoniella heveanensis BCC8398]) HSP 1 Score: 73.9442 bits (180), Expect = 3.385e-10 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0 Query: 87 WVDVVGRNNRAVRRNI----GLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSC 145 WV VVG + VR N G+LRFLGP F +G WAG+E++G NDGSV+GV YF+C Sbjct: 167 WVPVVGEH---VRINSMGYEGVLRFLGPTQFKEGVWAGVELEGGFAGKGKNDGSVEGVSYFTC 226
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|1101835491|ref|XP_019013133.1| (hypothetical protein I206_02630 [Kwoniella pini CBS 10737] >gi|1045458470|gb|OCF51914.1| hypothetical protein I206_02630 [Kwoniella pini CBS 10737]) HSP 1 Score: 72.4034 bits (176), Expect = 1.146e-9 Identity = 32/63 (50.79%), Postives = 37/63 (58.73%), Query Frame = 0 Query: 87 WVDVVGRNNRAVRRNI----GLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSC 145 W VVG VR N G LRFLGP F +G WAG+E++G NDG+VDGV YFSC Sbjct: 164 WTPVVGEK---VRINSMGYEGALRFLGPTQFKEGVWAGVELEGGFAGKGKNDGTVDGVAYFSC 223
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|388857886|emb|CCF48551.1| (related to Restin (intermediate filament-associated protein) [Ustilago hordei]) HSP 1 Score: 71.633 bits (174), Expect = 2.140e-9 Identity = 46/146 (31.51%), Postives = 72/146 (49.32%), Query Frame = 0 Query: 14 SPSASETSKSYTAESYIASNANLMPQSTALATFKDIEAKVGWNPSLLASPYSQTVRYLQVTDQDARPAPAKGIWVDVVGRNNRAVRRNIGLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSCLSGHQGLLVDVKWV 159 SPSAS+ S +A S+ ++ A+ + DI A+ + PS+++ S T AR +G +++ + + +G+LR LGPV F G +AG+E+ G V NDGSV G +YF+C G+ GL V Sbjct: 135 SPSASDLSPG-SASSFPSAVASTSRSVATPKRYSDIHARSSYTPSMVSRTPSHTSHASSTAASCARQDIRRGRQLEIGDLVHMETSQLVGVLRHLGPVQFKAGFYAGLELTGDSVGKGKNDGSVQGTQYFACAPGN-GLFCPASKV 278
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|1102539100|ref|XP_019045201.1| (hypothetical protein I302_05589 [Kwoniella bestiolae CBS 10118] >gi|1045429782|gb|OCF24131.1| hypothetical protein I302_05589 [Kwoniella bestiolae CBS 10118]) HSP 1 Score: 71.2478 bits (173), Expect = 2.642e-9 Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0 Query: 87 WVDVVGRNNRAVRRNI----GLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSC 145 WV VVG VR N G+LRFLGP F +G WAG+E++G NDG+V+G YF+C Sbjct: 166 WVPVVGEK---VRINSMGYEGILRFLGPTQFKEGVWAGVELEGGFAGKGKNDGTVEGTSYFTC 225
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|1069905931|ref|XP_018261949.1| (hypothetical protein I303_04964 [Kwoniella dejecticola CBS 10117] >gi|1039710243|gb|OBR84107.1| hypothetical protein I303_04964 [Kwoniella dejecticola CBS 10117]) HSP 1 Score: 69.3218 bits (168), Expect = 9.760e-9 Identity = 30/63 (47.62%), Postives = 37/63 (58.73%), Query Frame = 0 Query: 87 WVDVVGRNNRAVRRNI----GLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSC 145 W V+G VR N G LRFLGP F +G WAG+E++G NDG+VDGV YF+C Sbjct: 164 WAPVLGER---VRINSMGYEGTLRFLGPTQFKEGVWAGVELEGGFAGKGKNDGTVDGVAYFTC 223
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|1098865906|emb|SAM81581.1| (related to Restin (intermediate filament-associated protein) [Ustilago bromivora]) HSP 1 Score: 67.3958 bits (163), Expect = 4.331e-8 Identity = 43/136 (31.62%), Postives = 67/136 (49.26%), Query Frame = 0 Query: 14 SPSASETSKSYTAESYIASNANLMPQSTALATFKDIEAKVGWNPSLLASPYSQTVRYLQVTDQDARPAPAKGIWVDVVGRNNRAVRRNIGLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSCLSGH 149 SPSAS+ S +A S+ ++ A+ + DI A+ + PS+++ S T AR +G +++ +G+LR LGPV F G +AG+E+ G V NDGSV G +YF+C G+ Sbjct: 137 SPSASDLSPG-SASSFPSAVASTSRSVATPKRYSDIHARSSYTPSMVSRTSSHTSHASSTAASRAREDIRRGRQLEIGDLVRMEESELVGVLRHLGPVQFKAGFYAGLELTGDSVGKGKNDGSVQGTQYFACAPGN 271
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|808373398|ref|XP_012191718.1| (ER to Golgi transport-related protein [Pseudozyma hubeiensis SY62] >gi|501309273|dbj|GAC98131.1| ER to Golgi transport-related protein [Pseudozyma hubeiensis SY62]) HSP 1 Score: 65.855 bits (159), Expect = 1.248e-7 Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 0 Query: 46 FKDIEAKVGWNPSLLASPYSQTVRYLQVTDQDARPAPAKGIWV---DVVGRNNRAVRRNIGLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSCLSGH 149 + D+ + G+ PS ++ S T T AR +G + DVV + + +G+LR LGPV F G +AG+E+ G V NDGSV G +YF+C G+ Sbjct: 165 YSDVHGRAGFTPSAISRTPSHTS---STTASRAREHIRRGRELEIGDVVRMDGSEL---VGVLRHLGPVDFKPGFYAGLELTGDSVGKGKNDGSVQGTQYFACAPGN 265
BLAST of EWM28637.1 vs. NCBI_GenBank
Match: gi|1071041504|ref|XP_018280644.1| (hypothetical protein CC85DRAFT_315955 [Cutaneotrichosporon oleaginosus] >gi|831334610|gb|KLT44153.1| hypothetical protein CC85DRAFT_315955 [Cutaneotrichosporon oleaginosus]) HSP 1 Score: 65.0846 bits (157), Expect = 2.013e-7 Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 0 Query: 103 GLLRFLGPVHFSKGTWAGIEVQGAIVADNANDGSVDGVRYFSC 145 G LR+LGP H G WAG+E++G NDGSVD V+YF C Sbjct: 192 GTLRYLGPTHIRDGIWAGVELEGGFKGKGRNDGSVDNVKYFQC 234 The following BLAST results are available for this feature:
BLAST of EWM28637.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|