EWM28647.1, cds2019 (CDS) Nannochloropsis gaditana

Overview
NameEWM28647.1
Unique Namecds2019
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:726004..726058 +
Alignment locationCM002458.1:726106..726517 +
Alignment locationCM002458.1:726565..726748 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28647.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100177g8.1004.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:726004..726058 +
CM002458.1supercontigCM002458.1:726106..726517 +
CM002458.1supercontigCM002458.1:726565..726748 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28647.1 vs. NCBI_GenBank
Match: gi|585111068|gb|EWM28647.1| (hypothetical protein Naga_100177g8 [Nannochloropsis gaditana])

HSP 1 Score: 445.662 bits (1145), Expect = 2.025e-158
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 
Query:    1 MHLTPLNEDEKSELAWLHWKSEITRLSKRSRRLRSGAEFDREIDRINEREGSGTISTEGREYAGRRVERKDQKSLRKEFAPPSALGMSVWRHCGTRMTAFGGSTSALPGSAQSVGVSPDMPIYPCTCYSLVRATRPGKETTSLRNGEPVEETRNGGGAAFFEVSNVTVLNVLCQHVPIWSVSGSCYVPWDEGDVECGWSMEKEARGTPTDCKALMT 216
            MHLTPLNEDEKSELAWLHWKSEITRLSKRSRRLRSGAEFDREIDRINEREGSGTISTEGREYAGRRVERKDQKSLRKEFAPPSALGMSVWRHCGTRMTAFGGSTSALPGSAQSVGVSPDMPIYPCTCYSLVRATRPGKETTSLRNGEPVEETRNGGGAAFFEVSNVTVLNVLCQHVPIWSVSGSCYVPWDEGDVECGWSMEKEARGTPTDCKALMT
Sbjct:    1 MHLTPLNEDEKSELAWLHWKSEITRLSKRSRRLRSGAEFDREIDRINEREGSGTISTEGREYAGRRVERKDQKSLRKEFAPPSALGMSVWRHCGTRMTAFGGSTSALPGSAQSVGVSPDMPIYPCTCYSLVRATRPGKETTSLRNGEPVEETRNGGGAAFFEVSNVTVLNVLCQHVPIWSVSGSCYVPWDEGDVECGWSMEKEARGTPTDCKALMT 216
The following BLAST results are available for this feature:
BLAST of EWM28647.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111068|gb|EWM28647.1|2.025e-158100.00hypothetical protein Naga_100177g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2027rna2027Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications