EWM28643.1, cds2014 (CDS) Nannochloropsis gaditana

Overview
NameEWM28643.1
Unique Namecds2014
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:717824..718027 +
Alignment locationCM002458.1:718099..718316 +
Alignment locationCM002458.1:718365..718486 +
Alignment locationCM002458.1:718534..718682 +

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Properties
Property NameValue
Protein idEWM28643.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100177g2.1000.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:717824..718027 +
CM002458.1supercontigCM002458.1:718099..718316 +
CM002458.1supercontigCM002458.1:718365..718486 +
CM002458.1supercontigCM002458.1:718534..718682 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28643.1 vs. NCBI_GenBank
Match: gi|585111064|gb|EWM28643.1| (hypothetical protein Naga_100177g2 [Nannochloropsis gaditana])

HSP 1 Score: 476.863 bits (1226), Expect = 2.833e-170
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 
Query:    1 MTYSQRGTMKEFQINGYRKWRSFEKSNSNLKGEQCRPESALKMGRHGVVVVYSKDGMRTLTYCLPAGSEGEAPPTPGSSLHYLYEHLRAKPAARIQWKKIMIRLSEDTREALHGTTRTTRGNVEKEKRRMKAAEYQELRLYKVASLLGSSLSLDSPTQRRRQVRAARGRRGAEHCRGLRQGSKIIPHLKEECPPTELTLRLSTTGSSSFCADQRKEKANFDCQERCDKKK 230
            MTYSQRGTMKEFQINGYRKWRSFEKSNSNLKGEQCRPESALKMGRHGVVVVYSKDGMRTLTYCLPAGSEGEAPPTPGSSLHYLYEHLRAKPAARIQWKKIMIRLSEDTREALHGTTRTTRGNVEKEKRRMKAAEYQELRLYKVASLLGSSLSLDSPTQRRRQVRAARGRRGAEHCRGLRQGSKIIPHLKEECPPTELTLRLSTTGSSSFCADQRKEKANFDCQERCDKKK
Sbjct:    1 MTYSQRGTMKEFQINGYRKWRSFEKSNSNLKGEQCRPESALKMGRHGVVVVYSKDGMRTLTYCLPAGSEGEAPPTPGSSLHYLYEHLRAKPAARIQWKKIMIRLSEDTREALHGTTRTTRGNVEKEKRRMKAAEYQELRLYKVASLLGSSLSLDSPTQRRRQVRAARGRRGAEHCRGLRQGSKIIPHLKEECPPTELTLRLSTTGSSSFCADQRKEKANFDCQERCDKKK 230
The following BLAST results are available for this feature:
BLAST of EWM28643.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111064|gb|EWM28643.1|2.833e-170100.00hypothetical protein Naga_100177g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2022rna2022Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications