EWM30521.1, cds201 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|585113185|gb|EWM30521.1| (atp-dependent rna helicase ddx49-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0 Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0
Query: 1 MVSLFATSSKVLRKASKKRPRSVVEEEAKVGTAPAVGGSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKKEGGD 521
MVSLFATSSKVLRKASKKRPRSVVEEEAKVGTAPAVGGSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKKEGGD
Sbjct: 1 MVSLFATSSKVLRKASKKRPRSVVEEEAKVGTAPAVGGSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKKEGGD 521
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|298709765|emb|CBJ31567.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 484.567 bits (1246), Expect = 1.018e-162 Identity = 255/474 (53.80%), Postives = 332/474 (70.04%), Query Frame = 0
Query: 64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLL-----------------GVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKKEGG 520
+ + LGL W+ AC AMGF+RPTPVQ CIP++L+G+DV+GCAETGSGKTAAFALP+LH LS+DPYGVF +VLTPTRELA+QI+EQF ALGA +GLRH VVIGG +++Q++ L+ RPHVVVATPGRL DHL+G A P L+K +LVLDEADRL FE L I + + RQTLLFSATMT+ L+ L+ L PV +DLT+ +P +L ++YLF+P Q+K C++++ L L G G D+ G +G GD G A +S M+FV C++CQE++E L+E G+ LHS+L Q+RR AALGKFKS +VL+STDVASRGLDIP V LV+N+D+PR++TDY+HRVGRTARAGR GRAVS+V+QYD+ L+ +E TG + C EV E++V++LLN VAKA+R ARMRLME GFDE+ ER R ++ + R + GG
Sbjct: 110 ATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKDVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTFEGELPCIPKTLPN-SRQTLLFSATMTSNLEALEALALTNPVKYDLTKKATVPKTLTQQYLFMPRQMKTCFVVQTLNMLASDNLWSDPADRKTRKSRGGAGGLHDNPEADEGQEGTGDGDGRA---RSVMIFVSKCRKCQELSETLVELGVDCTPLHSLLGQRRRTAALGKFKSQQTKVLISTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTPLGLCPEVEEDDVLKLLNQVAKASRVARMRLMEQGFDERETSIKERNSRQRESKGEGRTHSSSNGGG 579
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|1173953826|gb|OQS01341.1| (DEAD/DEAH box RNA helicase [Achlya hypogyna]) HSP 1 Score: 464.537 bits (1194), Expect = 9.383e-157 Identity = 240/441 (54.42%), Postives = 308/441 (69.84%), Query Frame = 0
Query: 64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGT-AGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHE-HLERKK 501
+ + LGL PW+ C+ +G +PTPVQ CIP IL GRDV+GCA+TGSGKTAAFALP+LH L+++ +G F LVLTPTRELA QI EQFQALG+ + LR CVV+GG M+ QA+ L RPHV++ATPGRL DH+ A PP+L ++VLDEADRL F + LA +L AM RQTLLFSATMT LKDL+ + P FD T + A L++ YLFVPAQ+K YL+ L+ KL+ TE V+ ++ K T A +S +VFV TC+ CQ VAE+ LE L V LHS++ Q RRLAALGKFKS L RVL+ TDVASRGLDIP+V VLN+DLPR + DYIHRVGRTARAGR G ++S+VTQ+D+ LLQ +EA G+ + E E E EV+++LN V ATR A+M++ E GFD+++ + L+R+K
Sbjct: 39 TTFADLGLDPWLVAKCSLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHNLAKEMFGPFALVLTPTRELAFQIGEQFQALGSGISLRTCVVVGGVDMMTQALALQERPHVIIATPGRLRDHMLRANPPNLKLVQYVVLDEADRLLSAAFSKDLAFLLDAMGTSTRQTLLFSATMTADLKDLEAVALTNPYRFDATPSATTVAQLKQSYLFVPAQIKTTYLMYLMSKLVDDTPTEDKPVKAKKSKKAPPAVVPTSAEKTESMVVFVATCKMCQLVAEIALELELPCVVLHSMMGQARRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVLNFDLPRDADDYIHRVGRTARAGRRGTSISIVTQHDIELLQNIEAAIGKPLDNYEAEAPEAEVLKMLNDVTTATRVAKMKMTEHGFDDKLKQRQLQRQK 479
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|673021268|ref|XP_008864595.1| (hypothetical protein H310_02751 [Aphanomyces invadans] >gi|574479526|gb|ETW06520.1| hypothetical protein H310_02751 [Aphanomyces invadans]) HSP 1 Score: 462.996 bits (1190), Expect = 5.119e-156 Identity = 242/450 (53.78%), Postives = 305/450 (67.78%), Query Frame = 0
Query: 64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDE-------SGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKK 505
+ + LGL PWI C +G +PTPVQ CIP IL GRDVMGCA+TGSGKTAAFALP+LH L+++ YG F +VLTPTRELA QIAEQFQALG+ L LR CVV+GG M+ QA+ L +RPHV+VATPGRL DH+ A PP+L +LVLDEADRL F + L +L + QTLLFSATMT L L+++ P FD T L++ YLFVPAQ+K YL+ L+QKL+ + D+ + A+ D + +A KS +VFV TC+ CQ + E+ E L V+LH+V+ Q RRLAALGKFKS L R+L+STDVASRGLDIPDV V+NYDLPR + DYIHRVGRTARAGR+G A+S+VTQ+D+ALL VEA G+ + E E E +V++LLN V ATR ++MRL E GFD++V RKK+ K
Sbjct: 47 TTFADLGLDPWIAAKCKLLGLHKPTPVQAHCIPPILAGRDVMGCAQTGSGKTAAFALPILHDLAKEIYGPFAVVLTPTRELAYQIAEQFQALGSGLSLRTCVVVGGVDMMTQALSLQQRPHVLVATPGRLRDHMLRANPPNLKLIKYLVLDEADRLLNATFAKDLEFLLDTV-GTSHQTLLFSATMTADLASLEKMAMTNPFRFDATPTATTVTQLKQSYLFVPAQIKPTYLMYLMQKLIDVDDSSVDASEKVKKARRRHDRLEAALAATTSADRSKSMVVFVATCRMCQLMCEIATEFRLPVVALHAVMGQSRRLAALGKFKSGLARILISTDVASRGLDIPDVTHVINYDLPRDADDYIHRVGRTARAGRHGTAISLVTQHDIALLHNVEAKVGKPLTNYEDEAPEADVLKLLNDVTTATRVSKMRLTEHGFDDRVQ---ARKKKWSK 492
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|698804254|ref|XP_009835156.1| (hypothetical protein H257_10342 [Aphanomyces astaci] >gi|574110021|gb|ETV75522.1| hypothetical protein H257_10342 [Aphanomyces astaci]) HSP 1 Score: 459.529 bits (1181), Expect = 1.604e-154 Identity = 241/451 (53.44%), Postives = 304/451 (67.41%), Query Frame = 0
Query: 64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPV--------KSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEE-VTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKK 505
+ + LGL PWI C +G +PTPVQ CIP IL GRDVMGCA+TGSGKTAAFALP+LH L+++ YG F LVLTPTRELA QIAEQFQALG+ L LR CVV+GG M+ QA+ L +RPHV+VATPGRL DH+ A PP+L +LVLDEADRL F + LA +L QTLLFSATMT L L+++ P FD T +L++ YLFVPAQ+K YL+ LLQ L+ + +S ++ K E GPV +S +VFV TC+ CQ + E+ +E L V+LH+V+ Q RRLAALGKFK+ R+L+STDVASRGLDIPDV V+NYDLPR + DYIHRVGRTARAGR+G A+S+VTQ+D+ LL +EA G+ + E+ E +V++LLN V ATR A+MRL E GFD++V RKK+ K
Sbjct: 59 TTFADLGLDPWIAAKCKLLGLIKPTPVQANCIPPILAGRDVMGCAQTGSGKTAAFALPILHDLAKEIYGPFALVLTPTRELAYQIAEQFQALGSGLSLRTCVVVGGVDMMTQALTLQQRPHVLVATPGRLRDHMLRANPPNLKLIKYLVLDEADRLLTATFAKDLAYLLGTSVGTSHQTLLFSATMTADLTSLEKMAMTNPFRFDATPTATTVTTLKQSYLFVPAQIKPTYLLFLLQT-LVHIDDPDESSPSKKPKKHRRQE--VVGPVAMPNNSSSQSMIVFVATCRMCQLLCEIAIEFNLPVVALHAVMGQSRRLAALGKFKAGTARILISTDVASRGLDIPDVSTVVNYDLPRDADDYIHRVGRTARAGRHGSAISLVTQHDIQLLHNIEAKVGKPLANYEDHAPEPQVLKLLNDVTTATRVAKMRLTEHGFDDRVA---ARKKKWTK 503
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|813102984|ref|XP_012193990.1| (hypothetical protein SPRG_00506 [Saprolegnia parasitica CBS 223.65] >gi|641542007|gb|KDO35752.1| hypothetical protein SPRG_00506 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 458.759 bits (1179), Expect = 1.745e-154 Identity = 240/462 (51.95%), Postives = 306/462 (66.23%), Query Frame = 0
Query: 46 RESVQEAGVDAGSDSLSS----------SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLL-LGVGTETDSVRGRRGAKG--AGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEE-VTEEEVVRLLNPVAKATRAARMRLMEVGFDEQV 493
R++V+ A A D+L + ++ LGL PW+ C +G +PTPVQ CIP IL GRDV+GCA+TGSGKTAAFALP+LH L ++ YG F LVLTPTRELA QI EQFQALG+ + LR CVV+GG M+ QA+ L RPHV+VATPGRL DH+ PP+L +LVLDEADRL F + LA +L M RQTLLFSATMT LKDL+ + P FD T + + L++ YLFVPAQ+K YL+ L+ KL+ V E + + +G K +S +VFV TC+ CQ VAE+ LE L V LHS++ Q RRLAALGKFKS L RVL+ TDVASRGLDIP+V V+N+DLPR + DYIHRVGRTARAGR G ++S+VTQ+D+ LLQ +E V + + EE E EV+++LN V ATR A+M++ E GFD++V
Sbjct: 11 RKAVEPAVAAATDDALVPATAKVTPSILTTFSDLGLDPWLVTKCTLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHTLGKEMYGPFALVLTPTRELAFQIGEQFQALGSGISLRSCVVVGGVDMMTQALALQERPHVIVATPGRLHDHMLRPNPPNLKLIKYLVLDEADRLLSSTFSKDLAFLLDRMGSSSRQTLLFSATMTADLKDLEAVALTNPFRFDATPSATTVSQLKQSYLFVPAQIKTTYLMYLMSKLVDDSVPDEPATKKSFKGKKHLPIAIPDAPTDKTESMVVFVATCKSCQLVAEIALELELPCVVLHSMMGQSRRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKVIEKPLDNYEEHAPETEVLKMLNDVTTATRVAKMKMTEHGFDDKV 472
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|1173952423|gb|OQS00111.1| (DEAD/DEAH box RNA helicase [Thraustotheca clavata]) HSP 1 Score: 457.218 bits (1175), Expect = 7.494e-154 Identity = 245/503 (48.71%), Postives = 323/503 (64.21%), Query Frame = 0
Query: 11 VLRKASKKRP---RSVVEEEAKVGTAPAVGGSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDE-----SGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEE-VTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGK 504
VL A +KR ++VEE + + + P V V S+ + + LGL PW+ C+ +G +PTPVQ CIP IL GRDV+GCA+TGSGKTAAFALP+LH L+++ YG F LVLTPTRELA QI +QFQALG+ + LR CVV+GG M+ QA+ L RPHV++ATPGRL DH+ A PP+L +LVLDEADRL F + L +L +M +RQTLLFSATMT LKDL+ + P FD T + L++ YLFVPAQ+K YL+ L+ KL+ E D + ++ G + T +S +VFV TC+ CQ VAE+ LE L V LHS++ Q RRLA+LGKFKS + RVL+ TDVASRGLDIPDV V+N+DLPR + DYIHRVGRTARAGR G ++S+VTQ+D+ LLQ +E + + EE V E EV+++L V ATR A+M++ E GFD++V + +R+K K
Sbjct: 3 VLFGAKRKRKVVEPTIVEETSSIASVPVVAAK----VSTPSIL-------------TTFGDLGLDPWLVSKCSLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHNLAKEMYGPFALVLTPTRELAFQIGQQFQALGSGISLRSCVVVGGVDMMTQALALQDRPHVIIATPGRLHDHMLRANPPNLKLVQYLVLDEADRLLSATFSKDLTFLLDSMGTTQRQTLLFSATMTADLKDLEAVALTNPYRFDATPTATTVSQLKQSYLFVPAQIKTTYLMYLMSKLIDDSPQEEDEAKSKKKKHKKGSKELILPDPTKDKTESMVVFVATCKMCQLVAEIALELELPCVVLHSMMGQSRRLASLGKFKSGIARVLICTDVASRGLDIPDVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKAIEKPLDNYEENVPEAEVLKMLKDVTTATRVAKMKMTERGFDDKVKQR-QRQKSKK 487
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|669143310|ref|XP_008607217.1| (hypothetical protein SDRG_03362 [Saprolegnia diclina VS20] >gi|530740914|gb|EQC39156.1| hypothetical protein SDRG_03362 [Saprolegnia diclina VS20]) HSP 1 Score: 456.447 bits (1173), Expect = 1.588e-153 Identity = 238/459 (51.85%), Postives = 305/459 (66.45%), Query Frame = 0
Query: 64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKG----AGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKK 517
+ ++ LGL PW+ C +G +PTPVQ CIP IL GRDV+GCA+TGSGKTAAFALP+LH L ++ YG F LVLTPTRELA QI EQFQALG+ + LR CVV+GG M+ QA+ L RPHV+VATPGRL DH+ PP+L +LVLDEADRL F + LA +L M RQTLLFSATMT LKDL+ + P FD T + + L++ YLFVPAQ+K YL+ L+ KL+ E + + K A E+ +S +VFV TC+ CQ VAE+ LE L V LHS++ Q RRLAALGKFKS L RVL+ TDVASRGLDIP+V V+N+DLPR + DYIHRVGRTARAGR G ++S+VTQ+D+ LLQ +E V + + E E EV+++LN V ATR A+M++ E GFD+++ K RQ++R++ KK
Sbjct: 39 TTFSDLGLDPWLVTKCTLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHTLGKEMYGPFALVLTPTRELAFQIGEQFQALGSGISLRSCVVVGGVDMMTQALALQERPHVIVATPGRLHDHMLRPNPPNLKLIKYLVLDEADRLLSSTFSKDLAFLLDRMGSSSRQTLLFSATMTADLKDLEAVALTNPFRFDATPSATTVSQLKQSYLFVPAQIKTTYLMYLMSKLVDDSVPEEPAKKKSFKGKKHLPIAIPEADGKDKTESMVVFVATCKSCQLVAEIALELELPCVVLHSMMGQSRRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKVIEKPLDNYEAHAPETEVLKMLNDVTTATRVAKMKMTEHGFDDKL-----------KQRQQQRKKHTKK 486
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|970640003|gb|KUF82756.1| (DEAD-box ATP-dependent RNA helicase 36 [Phytophthora nicotianae]) HSP 1 Score: 456.447 bits (1173), Expect = 3.368e-153 Identity = 240/467 (51.39%), Postives = 319/467 (68.31%), Query Frame = 0
Query: 54 VDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVL-FDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAG---------DESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVH-EHLERKKRGKKDRQ 508
V+ S+ L S + LG+ PW+ C +G + PTPVQ CIP IL GRDV+GCA+TGSGKTAAFALP+LH LS+DPYG + LVLTPTRELA QIA+QF A G+ + +R V++GG M++Q++ L +RPH++VATPGR DHL PP++S ++VLDEADRL F + L+ I + +RQTLLFSATMT L L++ FD T + A+L++ YLF+PAQVKM YL+ L+ K+L E + + R+ AKG D + + ++S M+FV TC+ C+ V E+ E G V+LHS++SQ RRLAALGKFKS L +L+STDVASRGLDIP+V +VLN+DLPR + DYIHRVGRTARAGR G+A+SMVTQ+D+ LLQ +EA G+KM E E E++V++LLN V ATR A+M+L E GFD++VH +R K K D+Q
Sbjct: 44 VENASNVLIS--FLNLGVDPWLVKRCELLGIRHPTPVQAHCIPPILAGRDVIGCAQTGSGKTAAFALPILHTLSKDPYGPYALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSLSLQQRPHIIVATPGRFRDHLLRVDPPNISLVKYVVLDEADRLLDVSFAKDLSFIFDKL-PTKRQTLLFSATMTANLDRLEQTALSDDAFRFDATPSVKTVATLKQFYLFIPAQVKMTYLMYLM-KMLDPTDEEEEEQQTRKLAKGRKKDQDLEKLLDAATSKRQLRSMMIFVSTCKMCELVGEIGNELGTKCVTLHSMMSQNRRLAALGKFKSGLSHILISTDVASRGLDIPEVDVVLNFDLPRDADDYIHRVGRTARAGRSGQAISMVTQHDIELLQNIEAKVGKKMDDYETEAPEKKVLKLLNDVTTATRIAKMKLTERGFDDKVHARKAKRHKSNKTDKQ 506
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|675202869|ref|XP_008910319.1| (hypothetical protein PPTG_15065 [Phytophthora parasitica INRA-310] >gi|566030762|gb|ETI53673.1| hypothetical protein F443_03437 [Phytophthora parasitica P1569] >gi|567968411|gb|ETK93550.1| hypothetical protein L915_03312 [Phytophthora parasitica] >gi|567996846|gb|ETL46946.1| hypothetical protein L916_03279 [Phytophthora parasitica] >gi|568012476|gb|ETL86654.1| hypothetical protein L917_13949 [Phytophthora parasitica] >gi|568089550|gb|ETN04392.1| hypothetical protein PPTG_15065 [Phytophthora parasitica INRA-310] >gi|570958504|gb|ETP23483.1| hypothetical protein F441_03423 [Phytophthora parasitica CJ01A1] >gi|570994328|gb|ETP51490.1| hypothetical protein F442_03406 [Phytophthora parasitica P10297]) HSP 1 Score: 454.907 bits (1169), Expect = 1.010e-152 Identity = 239/467 (51.18%), Postives = 319/467 (68.31%), Query Frame = 0
Query: 54 VDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVL-FDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAG---------DESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVH-EHLERKKRGKKDRQ 508
V+ S+ L S + LG+ PW+ C +G + PTPVQ CIP IL GRDV+GCA+TGSGKTAAFALP+LH LS+DPYG + LVLTPTRELA QIA+QF A G+ + +R V++GG M++Q++ L +RPH++VATPGR DHL PP++S ++VLDEADRL F + L+ I + +RQTLLFSATMT L L++ FD T + A+L++ YLF+PAQVKM YL+ L+ K+L E + + R+ AKG D + + ++S M+FV TC+ C+ V E+ E G V+LHS++SQ RRLAALGKFKS L +L+STDVASRGLDIP+V +VLN+DLPR + DYIHRVGRTARAGR G+A+S+VTQ+D+ LLQ +EA G+KM E E E++V++LLN V ATR A+M+L E GFD++VH +R K K D+Q
Sbjct: 44 VENASNVLIS--FLNLGVDPWLVKRCELLGIRHPTPVQAHCIPPILAGRDVIGCAQTGSGKTAAFALPILHTLSKDPYGPYALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSLSLQQRPHIIVATPGRFRDHLLRVDPPNISLVKYVVLDEADRLLDVSFAKDLSFIFDKL-PTKRQTLLFSATMTANLDRLEQTALSDDAFRFDATPSVKTVATLKQFYLFIPAQVKMTYLMYLM-KMLDPTDEEEEEQQTRKLAKGRKKDQDLEKLLDAATSKRQLRSMMIFVSTCKMCELVGEIGNELGTKCVTLHSMMSQNRRLAALGKFKSGLSHILISTDVASRGLDIPEVDVVLNFDLPRDADDYIHRVGRTARAGRSGQAISLVTQHDIELLQNIEAKVGKKMDDYETEAPEKKVLKLLNDVTTATRIAKMKLTERGFDDKVHARKAKRHKSNKTDKQ 506 The following BLAST results are available for this feature:
BLAST of EWM30521.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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