EWM30521.1, cds201 (CDS) Nannochloropsis gaditana

Overview
NameEWM30521.1
Unique Namecds201
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:521940..523505 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30521.1
Productatp-dependent rna helicase ddx49-like protein
Orig transcript idgnl|cribi|Naga_100013g16.9809.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:521940..523505 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR014014RNA_helicase_DEAD_Q_motif
IPR000629RNA-helicase_DEAD-box_CS
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|585113185|gb|EWM30521.1| (atp-dependent rna helicase ddx49-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0
Query:    1 MVSLFATSSKVLRKASKKRPRSVVEEEAKVGTAPAVGGSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKKEGGD 521
            MVSLFATSSKVLRKASKKRPRSVVEEEAKVGTAPAVGGSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKKEGGD
Sbjct:    1 MVSLFATSSKVLRKASKKRPRSVVEEEAKVGTAPAVGGSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKKEGGD 521          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|298709765|emb|CBJ31567.1| (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 484.567 bits (1246), Expect = 1.018e-162
Identity = 255/474 (53.80%), Postives = 332/474 (70.04%), Query Frame = 0
Query:   64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLL-----------------GVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKKEGG 520
            + +  LGL  W+  AC AMGF+RPTPVQ  CIP++L+G+DV+GCAETGSGKTAAFALP+LH LS+DPYGVF +VLTPTRELA+QI+EQF ALGA +GLRH VVIGG  +++Q++ L+ RPHVVVATPGRL DHL+G A P L+K  +LVLDEADRL    FE  L  I   + +  RQTLLFSATMT+ L+ L+ L    PV +DLT+   +P +L ++YLF+P Q+K C++++ L  L                   G G   D+     G +G GD  G A   +S M+FV  C++CQE++E L+E G+    LHS+L Q+RR AALGKFKS   +VL+STDVASRGLDIP V LV+N+D+PR++TDY+HRVGRTARAGR GRAVS+V+QYD+ L+  +E  TG  +  C EV E++V++LLN VAKA+R ARMRLME GFDE+     ER  R ++ +   R  +    GG
Sbjct:  110 ATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKDVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTFEGELPCIPKTLPN-SRQTLLFSATMTSNLEALEALALTNPVKYDLTKKATVPKTLTQQYLFMPRQMKTCFVVQTLNMLASDNLWSDPADRKTRKSRGGAGGLHDNPEADEGQEGTGDGDGRA---RSVMIFVSKCRKCQELSETLVELGVDCTPLHSLLGQRRRTAALGKFKSQQTKVLISTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTPLGLCPEVEEDDVLKLLNQVAKASRVARMRLMEQGFDERETSIKERNSRQRESKGEGRTHSSSNGGG 579          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|1173953826|gb|OQS01341.1| (DEAD/DEAH box RNA helicase [Achlya hypogyna])

HSP 1 Score: 464.537 bits (1194), Expect = 9.383e-157
Identity = 240/441 (54.42%), Postives = 308/441 (69.84%), Query Frame = 0
Query:   64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGT-AGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHE-HLERKK 501
            + +  LGL PW+   C+ +G  +PTPVQ  CIP IL GRDV+GCA+TGSGKTAAFALP+LH L+++ +G F LVLTPTRELA QI EQFQALG+ + LR CVV+GG  M+ QA+ L  RPHV++ATPGRL DH+  A PP+L    ++VLDEADRL    F + LA +L AM    RQTLLFSATMT  LKDL+ +    P  FD T +    A L++ YLFVPAQ+K  YL+ L+ KL+    TE   V+ ++  K       T A   +S +VFV TC+ CQ VAE+ LE  L  V LHS++ Q RRLAALGKFKS L RVL+ TDVASRGLDIP+V  VLN+DLPR + DYIHRVGRTARAGR G ++S+VTQ+D+ LLQ +EA  G+ +   E E  E EV+++LN V  ATR A+M++ E GFD+++ +  L+R+K
Sbjct:   39 TTFADLGLDPWLVAKCSLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHNLAKEMFGPFALVLTPTRELAFQIGEQFQALGSGISLRTCVVVGGVDMMTQALALQERPHVIIATPGRLRDHMLRANPPNLKLVQYVVLDEADRLLSAAFSKDLAFLLDAMGTSTRQTLLFSATMTADLKDLEAVALTNPYRFDATPSATTVAQLKQSYLFVPAQIKTTYLMYLMSKLVDDTPTEDKPVKAKKSKKAPPAVVPTSAEKTESMVVFVATCKMCQLVAEIALELELPCVVLHSMMGQARRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVLNFDLPRDADDYIHRVGRTARAGRRGTSISIVTQHDIELLQNIEAAIGKPLDNYEAEAPEAEVLKMLNDVTTATRVAKMKMTEHGFDDKLKQRQLQRQK 479          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|673021268|ref|XP_008864595.1| (hypothetical protein H310_02751 [Aphanomyces invadans] >gi|574479526|gb|ETW06520.1| hypothetical protein H310_02751 [Aphanomyces invadans])

HSP 1 Score: 462.996 bits (1190), Expect = 5.119e-156
Identity = 242/450 (53.78%), Postives = 305/450 (67.78%), Query Frame = 0
Query:   64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDE-------SGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKK 505
            + +  LGL PWI   C  +G  +PTPVQ  CIP IL GRDVMGCA+TGSGKTAAFALP+LH L+++ YG F +VLTPTRELA QIAEQFQALG+ L LR CVV+GG  M+ QA+ L +RPHV+VATPGRL DH+  A PP+L    +LVLDEADRL    F + L  +L  +     QTLLFSATMT  L  L+++    P  FD T        L++ YLFVPAQ+K  YL+ L+QKL+    +  D+    + A+   D        + +A   KS +VFV TC+ CQ + E+  E  L  V+LH+V+ Q RRLAALGKFKS L R+L+STDVASRGLDIPDV  V+NYDLPR + DYIHRVGRTARAGR+G A+S+VTQ+D+ALL  VEA  G+ +   E E  E +V++LLN V  ATR ++MRL E GFD++V     RKK+  K
Sbjct:   47 TTFADLGLDPWIAAKCKLLGLHKPTPVQAHCIPPILAGRDVMGCAQTGSGKTAAFALPILHDLAKEIYGPFAVVLTPTRELAYQIAEQFQALGSGLSLRTCVVVGGVDMMTQALSLQQRPHVLVATPGRLRDHMLRANPPNLKLIKYLVLDEADRLLNATFAKDLEFLLDTV-GTSHQTLLFSATMTADLASLEKMAMTNPFRFDATPTATTVTQLKQSYLFVPAQIKPTYLMYLMQKLIDVDDSSVDASEKVKKARRRHDRLEAALAATTSADRSKSMVVFVATCRMCQLMCEIATEFRLPVVALHAVMGQSRRLAALGKFKSGLARILISTDVASRGLDIPDVTHVINYDLPRDADDYIHRVGRTARAGRHGTAISLVTQHDIALLHNVEAKVGKPLTNYEDEAPEADVLKLLNDVTTATRVSKMRLTEHGFDDRVQ---ARKKKWSK 492          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|698804254|ref|XP_009835156.1| (hypothetical protein H257_10342 [Aphanomyces astaci] >gi|574110021|gb|ETV75522.1| hypothetical protein H257_10342 [Aphanomyces astaci])

HSP 1 Score: 459.529 bits (1181), Expect = 1.604e-154
Identity = 241/451 (53.44%), Postives = 304/451 (67.41%), Query Frame = 0
Query:   64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPV--------KSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEE-VTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKK 505
            + +  LGL PWI   C  +G  +PTPVQ  CIP IL GRDVMGCA+TGSGKTAAFALP+LH L+++ YG F LVLTPTRELA QIAEQFQALG+ L LR CVV+GG  M+ QA+ L +RPHV+VATPGRL DH+  A PP+L    +LVLDEADRL    F + LA +L        QTLLFSATMT  L  L+++    P  FD T       +L++ YLFVPAQ+K  YL+ LLQ  L+ +    +S   ++  K    E    GPV        +S +VFV TC+ CQ + E+ +E  L  V+LH+V+ Q RRLAALGKFK+   R+L+STDVASRGLDIPDV  V+NYDLPR + DYIHRVGRTARAGR+G A+S+VTQ+D+ LL  +EA  G+ +   E+   E +V++LLN V  ATR A+MRL E GFD++V     RKK+  K
Sbjct:   59 TTFADLGLDPWIAAKCKLLGLIKPTPVQANCIPPILAGRDVMGCAQTGSGKTAAFALPILHDLAKEIYGPFALVLTPTRELAYQIAEQFQALGSGLSLRTCVVVGGVDMMTQALTLQQRPHVLVATPGRLRDHMLRANPPNLKLIKYLVLDEADRLLTATFAKDLAYLLGTSVGTSHQTLLFSATMTADLTSLEKMAMTNPFRFDATPTATTVTTLKQSYLFVPAQIKPTYLLFLLQT-LVHIDDPDESSPSKKPKKHRRQE--VVGPVAMPNNSSSQSMIVFVATCRMCQLLCEIAIEFNLPVVALHAVMGQSRRLAALGKFKAGTARILISTDVASRGLDIPDVSTVVNYDLPRDADDYIHRVGRTARAGRHGSAISLVTQHDIQLLHNIEAKVGKPLANYEDHAPEPQVLKLLNDVTTATRVAKMRLTEHGFDDRVA---ARKKKWTK 503          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|813102984|ref|XP_012193990.1| (hypothetical protein SPRG_00506 [Saprolegnia parasitica CBS 223.65] >gi|641542007|gb|KDO35752.1| hypothetical protein SPRG_00506 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 458.759 bits (1179), Expect = 1.745e-154
Identity = 240/462 (51.95%), Postives = 306/462 (66.23%), Query Frame = 0
Query:   46 RESVQEAGVDAGSDSLSS----------SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLL-LGVGTETDSVRGRRGAKG--AGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEE-VTEEEVVRLLNPVAKATRAARMRLMEVGFDEQV 493
            R++V+ A   A  D+L            + ++ LGL PW+   C  +G  +PTPVQ  CIP IL GRDV+GCA+TGSGKTAAFALP+LH L ++ YG F LVLTPTRELA QI EQFQALG+ + LR CVV+GG  M+ QA+ L  RPHV+VATPGRL DH+    PP+L    +LVLDEADRL    F + LA +L  M    RQTLLFSATMT  LKDL+ +    P  FD T +    + L++ YLFVPAQ+K  YL+ L+ KL+   V  E  + +  +G K              +S +VFV TC+ CQ VAE+ LE  L  V LHS++ Q RRLAALGKFKS L RVL+ TDVASRGLDIP+V  V+N+DLPR + DYIHRVGRTARAGR G ++S+VTQ+D+ LLQ +E V  + +   EE   E EV+++LN V  ATR A+M++ E GFD++V
Sbjct:   11 RKAVEPAVAAATDDALVPATAKVTPSILTTFSDLGLDPWLVTKCTLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHTLGKEMYGPFALVLTPTRELAFQIGEQFQALGSGISLRSCVVVGGVDMMTQALALQERPHVIVATPGRLHDHMLRPNPPNLKLIKYLVLDEADRLLSSTFSKDLAFLLDRMGSSSRQTLLFSATMTADLKDLEAVALTNPFRFDATPSATTVSQLKQSYLFVPAQIKTTYLMYLMSKLVDDSVPDEPATKKSFKGKKHLPIAIPDAPTDKTESMVVFVATCKSCQLVAEIALELELPCVVLHSMMGQSRRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKVIEKPLDNYEEHAPETEVLKMLNDVTTATRVAKMKMTEHGFDDKV 472          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|1173952423|gb|OQS00111.1| (DEAD/DEAH box RNA helicase [Thraustotheca clavata])

HSP 1 Score: 457.218 bits (1175), Expect = 7.494e-154
Identity = 245/503 (48.71%), Postives = 323/503 (64.21%), Query Frame = 0
Query:   11 VLRKASKKRP---RSVVEEEAKVGTAPAVGGSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDE-----SGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEE-VTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGK 504
            VL  A +KR     ++VEE + + + P V       V   S+              + +  LGL PW+   C+ +G  +PTPVQ  CIP IL GRDV+GCA+TGSGKTAAFALP+LH L+++ YG F LVLTPTRELA QI +QFQALG+ + LR CVV+GG  M+ QA+ L  RPHV++ATPGRL DH+  A PP+L    +LVLDEADRL    F + L  +L +M   +RQTLLFSATMT  LKDL+ +    P  FD T      + L++ YLFVPAQ+K  YL+ L+ KL+     E D  + ++     G +       T    +S +VFV TC+ CQ VAE+ LE  L  V LHS++ Q RRLA+LGKFKS + RVL+ TDVASRGLDIPDV  V+N+DLPR + DYIHRVGRTARAGR G ++S+VTQ+D+ LLQ +E    + +   EE V E EV+++L  V  ATR A+M++ E GFD++V +  +R+K  K
Sbjct:    3 VLFGAKRKRKVVEPTIVEETSSIASVPVVAAK----VSTPSIL-------------TTFGDLGLDPWLVSKCSLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHNLAKEMYGPFALVLTPTRELAFQIGQQFQALGSGISLRSCVVVGGVDMMTQALALQDRPHVIIATPGRLHDHMLRANPPNLKLVQYLVLDEADRLLSATFSKDLTFLLDSMGTTQRQTLLFSATMTADLKDLEAVALTNPYRFDATPTATTVSQLKQSYLFVPAQIKTTYLMYLMSKLIDDSPQEEDEAKSKKKKHKKGSKELILPDPTKDKTESMVVFVATCKMCQLVAEIALELELPCVVLHSMMGQSRRLASLGKFKSGIARVLICTDVASRGLDIPDVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKAIEKPLDNYEENVPEAEVLKMLKDVTTATRVAKMKMTERGFDDKVKQR-QRQKSKK 487          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|669143310|ref|XP_008607217.1| (hypothetical protein SDRG_03362 [Saprolegnia diclina VS20] >gi|530740914|gb|EQC39156.1| hypothetical protein SDRG_03362 [Saprolegnia diclina VS20])

HSP 1 Score: 456.447 bits (1173), Expect = 1.588e-153
Identity = 238/459 (51.85%), Postives = 305/459 (66.45%), Query Frame = 0
Query:   64 SCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKG----AGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDRQRKRRRAGKK 517
            + ++ LGL PW+   C  +G  +PTPVQ  CIP IL GRDV+GCA+TGSGKTAAFALP+LH L ++ YG F LVLTPTRELA QI EQFQALG+ + LR CVV+GG  M+ QA+ L  RPHV+VATPGRL DH+    PP+L    +LVLDEADRL    F + LA +L  M    RQTLLFSATMT  LKDL+ +    P  FD T +    + L++ YLFVPAQ+K  YL+ L+ KL+     E  + +     K     A  E+      +S +VFV TC+ CQ VAE+ LE  L  V LHS++ Q RRLAALGKFKS L RVL+ TDVASRGLDIP+V  V+N+DLPR + DYIHRVGRTARAGR G ++S+VTQ+D+ LLQ +E V  + +   E    E EV+++LN V  ATR A+M++ E GFD+++           K RQ++R++  KK
Sbjct:   39 TTFSDLGLDPWLVTKCTLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHTLGKEMYGPFALVLTPTRELAFQIGEQFQALGSGISLRSCVVVGGVDMMTQALALQERPHVIVATPGRLHDHMLRPNPPNLKLIKYLVLDEADRLLSSTFSKDLAFLLDRMGSSSRQTLLFSATMTADLKDLEAVALTNPFRFDATPSATTVSQLKQSYLFVPAQIKTTYLMYLMSKLVDDSVPEEPAKKKSFKGKKHLPIAIPEADGKDKTESMVVFVATCKSCQLVAEIALELELPCVVLHSMMGQSRRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKVIEKPLDNYEAHAPETEVLKMLNDVTTATRVAKMKMTEHGFDDKL-----------KQRQQQRKKHTKK 486          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|970640003|gb|KUF82756.1| (DEAD-box ATP-dependent RNA helicase 36 [Phytophthora nicotianae])

HSP 1 Score: 456.447 bits (1173), Expect = 3.368e-153
Identity = 240/467 (51.39%), Postives = 319/467 (68.31%), Query Frame = 0
Query:   54 VDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVL-FDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAG---------DESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVH-EHLERKKRGKKDRQ 508
            V+  S+ L S  +  LG+ PW+   C  +G + PTPVQ  CIP IL GRDV+GCA+TGSGKTAAFALP+LH LS+DPYG + LVLTPTRELA QIA+QF A G+ + +R  V++GG  M++Q++ L +RPH++VATPGR  DHL    PP++S   ++VLDEADRL    F + L+ I   +   +RQTLLFSATMT  L  L++         FD T +    A+L++ YLF+PAQVKM YL+ L+ K+L     E +  + R+ AKG           D + +   ++S M+FV TC+ C+ V E+  E G   V+LHS++SQ RRLAALGKFKS L  +L+STDVASRGLDIP+V +VLN+DLPR + DYIHRVGRTARAGR G+A+SMVTQ+D+ LLQ +EA  G+KM   E E  E++V++LLN V  ATR A+M+L E GFD++VH    +R K  K D+Q
Sbjct:   44 VENASNVLIS--FLNLGVDPWLVKRCELLGIRHPTPVQAHCIPPILAGRDVIGCAQTGSGKTAAFALPILHTLSKDPYGPYALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSLSLQQRPHIIVATPGRFRDHLLRVDPPNISLVKYVVLDEADRLLDVSFAKDLSFIFDKL-PTKRQTLLFSATMTANLDRLEQTALSDDAFRFDATPSVKTVATLKQFYLFIPAQVKMTYLMYLM-KMLDPTDEEEEEQQTRKLAKGRKKDQDLEKLLDAATSKRQLRSMMIFVSTCKMCELVGEIGNELGTKCVTLHSMMSQNRRLAALGKFKSGLSHILISTDVASRGLDIPEVDVVLNFDLPRDADDYIHRVGRTARAGRSGQAISMVTQHDIELLQNIEAKVGKKMDDYETEAPEKKVLKLLNDVTTATRIAKMKLTERGFDDKVHARKAKRHKSNKTDKQ 506          
BLAST of EWM30521.1 vs. NCBI_GenBank
Match: gi|675202869|ref|XP_008910319.1| (hypothetical protein PPTG_15065 [Phytophthora parasitica INRA-310] >gi|566030762|gb|ETI53673.1| hypothetical protein F443_03437 [Phytophthora parasitica P1569] >gi|567968411|gb|ETK93550.1| hypothetical protein L915_03312 [Phytophthora parasitica] >gi|567996846|gb|ETL46946.1| hypothetical protein L916_03279 [Phytophthora parasitica] >gi|568012476|gb|ETL86654.1| hypothetical protein L917_13949 [Phytophthora parasitica] >gi|568089550|gb|ETN04392.1| hypothetical protein PPTG_15065 [Phytophthora parasitica INRA-310] >gi|570958504|gb|ETP23483.1| hypothetical protein F441_03423 [Phytophthora parasitica CJ01A1] >gi|570994328|gb|ETP51490.1| hypothetical protein F442_03406 [Phytophthora parasitica P10297])

HSP 1 Score: 454.907 bits (1169), Expect = 1.010e-152
Identity = 239/467 (51.18%), Postives = 319/467 (68.31%), Query Frame = 0
Query:   54 VDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVL-FDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAG---------DESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACE-EVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVH-EHLERKKRGKKDRQ 508
            V+  S+ L S  +  LG+ PW+   C  +G + PTPVQ  CIP IL GRDV+GCA+TGSGKTAAFALP+LH LS+DPYG + LVLTPTRELA QIA+QF A G+ + +R  V++GG  M++Q++ L +RPH++VATPGR  DHL    PP++S   ++VLDEADRL    F + L+ I   +   +RQTLLFSATMT  L  L++         FD T +    A+L++ YLF+PAQVKM YL+ L+ K+L     E +  + R+ AKG           D + +   ++S M+FV TC+ C+ V E+  E G   V+LHS++SQ RRLAALGKFKS L  +L+STDVASRGLDIP+V +VLN+DLPR + DYIHRVGRTARAGR G+A+S+VTQ+D+ LLQ +EA  G+KM   E E  E++V++LLN V  ATR A+M+L E GFD++VH    +R K  K D+Q
Sbjct:   44 VENASNVLIS--FLNLGVDPWLVKRCELLGIRHPTPVQAHCIPPILAGRDVIGCAQTGSGKTAAFALPILHTLSKDPYGPYALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSLSLQQRPHIIVATPGRFRDHLLRVDPPNISLVKYVVLDEADRLLDVSFAKDLSFIFDKL-PTKRQTLLFSATMTANLDRLEQTALSDDAFRFDATPSVKTVATLKQFYLFIPAQVKMTYLMYLM-KMLDPTDEEEEEQQTRKLAKGRKKDQDLEKLLDAATSKRQLRSMMIFVSTCKMCELVGEIGNELGTKCVTLHSMMSQNRRLAALGKFKSGLSHILISTDVASRGLDIPEVDVVLNFDLPRDADDYIHRVGRTARAGRSGQAISLVTQHDIELLQNIEAKVGKKMDDYETEAPEKKVLKLLNDVTTATRIAKMKLTERGFDDKVHARKAKRHKSNKTDKQ 506          
The following BLAST results are available for this feature:
BLAST of EWM30521.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113185|gb|EWM30521.1|0.000e+0100.00atp-dependent rna helicase ddx49-like protein [Nan... [more]
gi|298709765|emb|CBJ31567.1|1.018e-16253.80DEAD box helicase [Ectocarpus siliculosus][more]
gi|1173953826|gb|OQS01341.1|9.383e-15754.42DEAD/DEAH box RNA helicase [Achlya hypogyna][more]
gi|673021268|ref|XP_008864595.1|5.119e-15653.78hypothetical protein H310_02751 [Aphanomyces invad... [more]
gi|698804254|ref|XP_009835156.1|1.604e-15453.44hypothetical protein H257_10342 [Aphanomyces astac... [more]
gi|813102984|ref|XP_012193990.1|1.745e-15451.95hypothetical protein SPRG_00506 [Saprolegnia paras... [more]
gi|1173952423|gb|OQS00111.1|7.494e-15448.71DEAD/DEAH box RNA helicase [Thraustotheca clavata][more]
gi|669143310|ref|XP_008607217.1|1.588e-15351.85hypothetical protein SDRG_03362 [Saprolegnia dicli... [more]
gi|970640003|gb|KUF82756.1|3.368e-15351.39DEAD-box ATP-dependent RNA helicase 36 [Phytophtho... [more]
gi|675202869|ref|XP_008910319.1|1.010e-15251.18hypothetical protein PPTG_15065 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna201rna201Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications