EWM28785.1, cds2008 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|585111208|gb|EWM28785.1| (hect e3 ubiquitin [Nannochloropsis gaditana]) HSP 1 Score: 1546.18 bits (4002), Expect = 0.000e+0 Identity = 754/754 (100.00%), Postives = 754/754 (100.00%), Query Frame = 0
Query: 1 MGQDQSISNQQYPSSSYPGAGRSSGGTNGPGNRPRPTPHVSPFQQPAYNSQPGGGRTTRTVNTEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRFSLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQLQAYEMRYNKDGWVRCLGQDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKGPPQSPDLVLLPPSEVSIDTTVPGTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHRYFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
MGQDQSISNQQYPSSSYPGAGRSSGGTNGPGNRPRPTPHVSPFQQPAYNSQPGGGRTTRTVNTEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRFSLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQLQAYEMRYNKDGWVRCLGQDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKGPPQSPDLVLLPPSEVSIDTTVPGTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHRYFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE
Sbjct: 1 MGQDQSISNQQYPSSSYPGAGRSSGGTNGPGNRPRPTPHVSPFQQPAYNSQPGGGRTTRTVNTEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRFSLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQLQAYEMRYNKDGWVRCLGQDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKGPPQSPDLVLLPPSEVSIDTTVPGTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHRYFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|676393179|ref|XP_009039867.1| (hypothetical protein AURANDRAFT_38473 [Aureococcus anophagefferens] >gi|323449598|gb|EGB05485.1| hypothetical protein AURANDRAFT_38473 [Aureococcus anophagefferens]) HSP 1 Score: 741.495 bits (1913), Expect = 0.000e+0 Identity = 382/771 (49.55%), Postives = 501/771 (64.98%), Query Frame = 0
Query: 21 GRSSGGTNGPGNRPRPTPHVSPFQQPAYNSQPGGGRTTRTVNTEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQAST-----FIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIR---------------FSLPPASDG---GGLGGAGGPGGSTGGGTGSS--NTSGPSPF-EKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQLQAYEMRYNKDGWVRCLGQDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKG-------PPQSPDLVLLPPSEVSIDTTVP----GTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHRYFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
G S +N NR R + H NS+ ++T +V PGA+ +PG QR Q V +PAG+RPGQ F V+ GQQ+MVRCP PG+ I + S+ ++ VP GV+ G+ F V+V + VTCP GVRPGMQ+R +P + G G + G G + G + SS N + SPF +++EV VPQGVRPG+ F L+A+GQRV VTCP +ARP QKIRF+LPI +++++Q+ ++ Y KDGW+RCL D+ FHW R +G V K +++ E TAFVR + + L L+P + ++ T VP GT L LS A +PF K +FR+ L+ PWE GH++I VRR +LL DS+ A E I+ A+MRKIFRFEF+ EPG+DAGGVAREW+ V+D LFNPDF L+ YS ++QMCMQI+ +SG+ +H RYF F GRLLGKAL D QIV HLVRP+ KHILGWP+ +AD+E LDA+T NL KL+++D + CLDFTVTE+ G + TVEL GAN T+ N+D Y++ +R+RL DRVK Q++ LL+GFY+ +PEALLS+FDFQ+LELLLCG+P +DIEDW RNT Y G++ R G+ H+VV+WFWEVV +DFD+E +ARLLQF TGTSGVPAQGF LQGND NIRKFTINSI SVFP+AHTCFNRIDLPLY +KK LK+ L++AIQME++GF I+
Sbjct: 2 GNESSTSNYRENRARESIHTGA----TTNSRISNSQSTSSV--PPGAYSVPGSQRRQAQF--YVTVPAGIRPGQEFPVIANGQQLMVRCPPGIRPGERIVVSAPRSSQGTQAYMATVPHGVRSGEQFPVLVNNQQLMVTCPPGVRPGMQVRTVFKSVCNSLFKQVRIMVPTSRRGANQGTMSSVQGGGSPSRGASPSSQSNDAVRSPFGNQMFEVNVPQGVRPGQAFALIANGQRVMVTCPANARPGQKIRFQLPIKLSSDEIQSIKLNYQKDGWIRCLSTDLTFHWVRSEGE--------------VDSEQEAKKKLEWAFEQTAFVRELRTLTVGTSTSKATHSLQLVPAKDAALSTVVPAINNGTSLA-QELSRYAAMPFQHKEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDDVEV--CCLDFTVTEDHWGTAQTVELKSDGANCTVTNSNVDDYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGSSHKVVKWFWEVVVDDFDEEHKARLLQFVTGTSGVPAQGFRALQGNDNNIRKFTINSIPETVSVFPKAHTCFNRIDLPLYDSKKKLKKFLTMAIQMEATGFDID 747
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|676395953|ref|XP_009041254.1| (hypothetical protein AURANDRAFT_55365 [Aureococcus anophagefferens] >gi|323448073|gb|EGB03976.1| hypothetical protein AURANDRAFT_55365 [Aureococcus anophagefferens]) HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0 Identity = 291/534 (54.49%), Postives = 378/534 (70.79%), Query Frame = 0
Query: 232 VTCPVDARPNQKIRFKLPIVPTNEQLQAYEMRYNKDGWVRCLGQDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKG-------PPQSPDLVLLPPSEVSIDTTVP----GTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHRYFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
VTCP +ARP QKIRF+LPI +++++Q+ ++ Y KDGW+RCL D+ FHW R + + K +++ E TAFVR + + L L+P + ++ T VP GT L LS A +PF K +FR+ L+ PWE GH++I VRR +LL DS+ A E I+ A+MRKIFRFEF+ EPG+DAGGVAREW+ V+D LFNPDF L+ YS ++QMCMQI+ +SG+ +H RYF F GRLLGKAL D QIV HLVRP+ KHILGWP+ +AD+E LDA+T NL KL+++D + CLDFTVTE+ G + TV+L P GAN T+ N+D+Y++ +R+RL DRVK Q++ LL+GFY+ +PEALLS+FDFQ+LELLLCG+P +DIEDW RNT Y G++ R GA H+VV+WFWEVV +DFD+E +ARLLQF TGTSGVPAQGF LQGND NIRKFTINSI SVFP+AHTCFNRIDLPLY +KK LK+ L++AIQME++GF I+
Sbjct: 2 VTCPANARPGQKIRFQLPIKLSSDEIQSIKLNYQKDGWIRCLSTDLTFHWVRSEAEADSDHES--------------KKKLEWAFERTAFVRELRTLTVGTSTSKATHSLQLVPAKDAALSTVVPAINNGTSLA-QELSRYAAMPFQHKEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDDVEV--CCLDFTVTEDHWGTAQTVDLKPDGANCTVTNNNVDEYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGASHKVVKWFWEVVVDDFDEEHKARLLQFVTGTSGVPAQGFRALQGNDNNIRKFTINSIPETVSVFPKAHTCFNRIDLPLYDSKKKLKKFLTMAIQMEATGFDID 518
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|1210511378|dbj|GAX29516.1| (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris]) HSP 1 Score: 567 bits (1460), Expect = 0.000e+0 Identity = 313/788 (39.72%), Postives = 448/788 (56.85%), Query Frame = 0
Query: 23 SSGGTNGPGNRPRPTPHVSPFQQPAYNSQPGGGRTTRTVNTEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQAS--------------------------------------TFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRFSLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQL---QAYEMR--YNKDGWVRCLG-QDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKGPPQSPD------LVLLPPSEVSIDTTVP---GTRLNFHTLSHGAQLP-FDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHRYFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPS--VLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
SSG +N R +P+V+ G G T + + + F +P IP V+PGQ F V + V V+CP + PG + I ++V +PEG++ G F V ++G + VTCP PG ++R PP G G S S +L+EV VPQGV+PG+ F LLA G RV VTCP++A P Q+IRFKLP T ++ +A E++ Y+KDGW R + D+KF W R+D + G + N +F E +A+VR P + + L+P S+ +D+ V G L ++ AQ+ F++K +F+E C LR W GHM I VRR LL DS+ A ++ ++RK++RFEF+GE GIDAGG+ REW++ VT +F+PD GL+ S +QMCMQI+ AS V + Y+RFLGR++GKAL + Q+V H+V+ + KH+LGWP+ D+ +D E QNL +L+++ + L LCLDF+ T+ F+G V+LVPGG+N+ + +N +YLEA LR+R+ DRVK QL ELLLGF++ +PE LL++FDFQ++ELL+CG+P +D++DW +T Y GE+ + + WFWEVV ++FDQE +ARLLQF TGTSGVPA+GF LQGNDGNIRKFTI+ + + ++PRAHTCFNRIDLP+Y+TK +L+E+L LA+ M ++GF IE
Sbjct: 8 SSGSSNNTKARANSSPNVNV-------KSKGSGGGTVSADGKSTVFRVP--------------IPDSVQPGQEFQVYAGNRIVRVKCPPNSQPGQFLQITVPIDPNESSNNNSKPNAGAANKSLPPDSPNVCPVEDRDGGPPAYMVTIPEGIRGGSQFPVTIQGQQLMVTCPPNAAPGTKVRIVPPPPPPDDVESSVG-----MSGNPDSKRKSMADEETQLFEVQVPQGVKPGQSFALLAAGVRVLVTCPLNAGPGQRIRFKLPKALTTKRKPRSEAVEIKLSYDKDGWTRTIRVSDMKFQWVRMDDN------------GDID------TNTRFDAEKSAYVRKLTFQPGGDERVRDGVMTLVPASDAFVDSRVKAYNGEVLVTYSEIADAQVKGFEEKAVWFQEKCQKLRVEWSEGHMRINVRRNFLLEDSVDAVMSLNRKDLRKVWRFEFIGEMGIDAGGLTREWFELVTQEIFDPDMGLWMSSETNQMCMQINPASKFVCDDYLVYYRFLGRVMGKALFEMQLVNGHMVQYIYKHLLGWPITFKDIATIDEEYHQNLKQLKDLHENGEDLEMLCLDFSTTQEFMGAKEEVDLVPGGSNIEVTNDNFPEYLEACLRYRMMDRVKDQLTELLLGFFDVIPEPLLTVFDFQEIELLMCGLPKIDMDDWREHTEYSGEYEHVNGDYPTCHWFWEVV-DEFDQEMKARLLQFVTGTSGVPARGFGVLQGNDGNIRKFTIHGVHVGVCLYPRAHTCFNRIDLPMYETKDELREKLKLAVTMVATGFDIE 750
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|1210527819|dbj|GAX13457.1| (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris]) HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 309/790 (39.11%), Postives = 446/790 (56.46%), Query Frame = 0
Query: 23 SSGGTNGPGNRPRPTPHVSPFQQPAYNSQPGGGRTTRTVNTEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQAS----------------------------------------TFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRFSLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQL---QAYEMR--YNKDGWVRCLG-QDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKGPPQSPD------LVLLPPSEVSIDTTVPGTR----LNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHRYFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPS--VLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
SSG +N NR +P+V+ G G T + + + F +P IP V+PGQ F V + V V+CP + PG + I ++V +PEG++ G F V ++G + VTCP PG ++R PP G G S +L+EV VPQGV+PG+ F LLA G RV VTCP++A P Q+IRFKLP T ++ +A E++ Y+KDGW R + D+KF W R+D + G + N +F E +A+VR P + + L+P S+ +D+ V +++ ++ F++K +F+E C LR W GHM I VRR LL DS+ A ++ ++RK++RFEF+GE GIDAGG+ REW++ VT +F+PD GL+ S +QMCMQI+ AS V + Y+RFLGR++GKAL + Q+V H+V+ + KH+LGWP+ D+ +D E QNL +L+++ + L LCLDF+ T+ F+G V+LVPGG+N+ + +N +YLEA LR+R+ DRVK QL ELLLGF++ +PE LL++FDFQ++ELL+CG+P +D++DW +T Y GE+ + + WFWEVV ++FDQE +ARLLQF TGTSGVPA+GF LQGNDGNIRKFTI+ + + ++PRAHTCFNRIDLP+Y+TK +L+E+L LA+ M ++GF IE
Sbjct: 8 SSGPSNNTKNRANSSPNVNV-------KSKGSGGGTVSADGKSTVFRVP--------------IPDSVQPGQEFQVYAGNRIVRVKCPPNSQPGQFLQITVPIDPNESSNNNNSNKPNAGAANKSLPPDSPNVCPVEDRDGGPPAYMVTIPEGIRGGSQFPVTIQGQQLVVTCPPNAAPGTKVRIVPPPPPPDDVESSVG-----ISGNPDSKRKLMADEETQLFEVQVPQGVKPGQSFALLAAGVRVLVTCPLNAGPGQRIRFKLPKALTTKRKPRSEAVEIKLSYDKDGWTRTIRVSDMKFQWVRMDDN----------------GDID--TNTRFDAEKSAYVRKLTFQPGGDERVRDGVMTLVPASDAFVDSRVKAYNGEVLVSYSEIAEAQVKGFEEKAVWFQEKCQKLRVEWSEGHMRINVRRNFLLEDSVDAVMSLNRKDLRKVWRFEFIGEMGIDAGGLTREWFELVTQEIFDPDMGLWMSSETNQMCMQINPASKFVCDDYLVYYRFLGRVMGKALFEMQLVNGHMVQYIYKHLLGWPITFKDIATIDEEYHQNLKQLKDLHENGEDLEMLCLDFSTTQEFMGAKEEVDLVPGGSNIEVTNDNFPEYLEACLRYRMMDRVKDQLTELLLGFFDVIPEPLLTVFDFQEIELLMCGLPKIDMDDWREHTEYSGEYEHVNGDYPTCHWFWEVV-DEFDQEMKARLLQFVTGTSGVPARGFGVLQGNDGNIRKFTIHGVHVGVCLYPRAHTCFNRIDLPMYETKDELREKLKLAVTMVATGFDIE 752
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|397640480|gb|EJK74143.1| (hypothetical protein THAOC_04195, partial [Thalassiosira oceanica]) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 288/668 (43.11%), Postives = 419/668 (62.72%), Query Frame = 0
Query: 127 TFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRF-SLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNE------QLQAYEMRYNKDGWVRCL-GQDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFK-----GPPQSPDLVLLPPSEVSIDTTVPGTR----LNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASG----------------------LVEPQHHR-YFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
++V++PEG++ GQ F V ++G + VTCP+ RPGM +R PP SD L P S++ +++EV+VP+GV PG+PF LLA G RV VTCP +A QKIRF LPI N+ +L ++ Y+KDGW R + D+KF W R D E GG A + +F +A+V + + L+ P + +D+ + +++ +++ + KI++F+E C L W GHM + VRR +LL+DS+ A +S ++RK++RFEF+GE GIDAGG+AREW++ VTD +F+PD GL+Q S +QMC+QI+ ASG + P+ H YFRF+GR++GKA+ D Q+V+ HLV+ + KHILGWPV+ +D++ +D E +L L++M S + L DFT TE LG TVELVPGGA++ + ENL +Y+EANL++RL R + QL ELLLGF++ +PE LL+IFDFQ+LELL+CG+P +D+++W NT Y G++ R G H+V WFWE+V +++DQE +ARLLQF TGTSGVPA+GF+ LQGNDGN+R+FTI+ ++L+ V+PR+HTCFNRIDLP+Y +K +L+E+L +AI M ++GF IE
Sbjct: 5 AYMVKIPEGIRGGQQFPVTIQGQQLSVTCPNAARPGMSVRIVPPPPPSDSPSLDRPRQPQRMANPNNRSNDKM------QMFEVIVPEGVYPGQPFALLAGGVRVLVTCPKNAAAGQKIRFNLPIRLVNKPDGPKSKLAEIKLSYDKDGWTRTIRANDMKFLWTRFD----ENGGVDTAT------------SQRFDDTKSAYVLKLDFHDGHDKMRHGSVSLVTPEKGVVDSNIKSVTGQELVSYQDIANAQNKSYKDKIQWFQETCGQLCAEWNEGHMRMNVRREYLLSDSMEAVMSLSRKDLRKVWRFEFIGEAGIDAGGLAREWFELVTDEVFDPDMGLWQTSATNQMCIQINPASGAFISCLLRFSSQNSHVFIGSLDISCPEDHLIYFRFIGRIMGKAMFDRQLVKGHLVQHLYKHILGWPVMFSDLKDIDEEYYNSLKGLKDMG-SDIEYLYADFTTTEETLGVKRTVELVPGGADIDVTEENLPEYIEANLKYRLLGRYEKQLNELLLGFFDVIPEPLLTIFDFQELELLMCGLPEIDMDNWKENTEYSGDYDREGPNHKVCGWFWEIV-SEYDQELKARLLQFVTGTSGVPAKGFSSLQGNDGNVRRFTIHGVALETCVYPRSHTCFNRIDLPIYDSKDELEEKLKIAITMAATGFDIE 648
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|1210519271|dbj|GAX21855.1| (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris]) HSP 1 Score: 526.939 bits (1356), Expect = 6.885e-173 Identity = 301/762 (39.50%), Postives = 424/762 (55.64%), Query Frame = 0
Query: 63 TEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPG----------------------------------------DLIAIEFQA-------STFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRFSLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQLQ-AYEMRYNKDGWVRCLG-QDVKFHWFRVDG---------SNREQGGTANAVVGGVGGSLGRPKNG--KFSIENTAFVRAF------KGPPQSPDLVLLPPSEVSIDTTV---PGTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHR-YFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
T PGA+++ Q+ +V +P GVRPG F V ++V VRCP +SPG D+ A+ QA TF+V +P V PGQ F V V G R VTCP P ++R P D +P +++EV VP+GV+PG+PF L+A+ QRV VTCP + P QKIRF+LP+ +++ AYE GW R + D+KF W R++ ++ G+G S G +F +A+VR ++ + L+P E +D+ + T L++ ++ +K E+F+ CN L WE GH++I VRR+ LL DS+ A + ++RK +R EFLGEPGIDAGGVAREW++ VT+ +F+P FGL+ S +Q C+ I+ +SGL P+ H YFRFLGR++G+AL D Q+++ H+V+ + KHILGWP+ D++ D E +L KL +M+ + + LDFTVTE +G +EL GGA + NL++YLE+NLR+R+ +R + QL+ELLLGF++ +PE L+IFD +LEL LCG+P +D+EDW NT Y G + G H VQWFWEVV +FDQEQRARLLQF TGTSGVP++GF+ LQG DGNI+KFTI+ + +PRAHTCFNRIDLP Y +K++L E+L AI + GF IE
Sbjct: 106 TRPGAYQVTRTAVGPAQV-YRVTVPVGVRPGAEFTVHAGLRRVRVRCPPTSSPGQSLQITLPPEPVTHHLLLKMAPLTAAEGTPEGGGAVTMTPDVQAVNRQAMLSGGTAQTFLVTIPPNVHPGQQFTVNVGGQRFAVTCPPSAGPNQKVRIVPPVVRD----------------------EPEAAPTTQVFEVAVPEGVQPGQPFALMANDQRVLVTCPPNVVPGQKIRFQLPVSHLVGKIELAYES--ETSGWRRTVRVNDLKFQWVRLEKKKEDAKKEKTDDNDEDPLAETTEGMGPSKVVDVEGMKQFDFRRSAYVRKVYYLEGNDARMRTGTIELIPAHEAVVDSRLVYHNRTLLSYSDIASVQGKSLQEKTEWFQNICNQLTAAWEDGHIKIAVRRSMLLQDSVDAVMSLGRDDLRKRWRIEFLGEPGIDAGGVAREWFELVTEQIFDPAFGLWIPSANNQACVNINPSSGLSCPEDHLIYFRFLGRVIGRALFDRQLIKGHMVQSIYKHILGWPITFEDIKAQDEEYYHSLQKLTKMEDVSI--MYLDFTVTEESMGARREIELTEGGALTEVTNANLEQYLESNLRYRMLERTRPQLQELLLGFFDVIPEPPLTIFDANELELTLCGLPTIDMEDWQANTKYSGLYEMTGRSHETVQWFWEVVLEEFDQEQRARLLQFVTGTSGVPSRGFSVLQGIDGNIKKFTIHGVDRKAYFYPRAHTCFNRIDLPNYSSKEELLEKLKAAISLSGVGFDIE 840
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|397613334|gb|EJK62158.1| (hypothetical protein THAOC_17242, partial [Thalassiosira oceanica]) HSP 1 Score: 511.916 bits (1317), Expect = 5.243e-171 Identity = 270/559 (48.30%), Postives = 367/559 (65.65%), Query Frame = 0
Query: 206 LYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVP-TNEQLQAYEMRYN--KDGWVRCLG-QDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKGPPQSPDLVLLPPSEVSIDTTVP---GTRLNFHTLSHGAQLP-FDKKIEFFREHC-NSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHR-YFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
++EVVVP GV+P + F L+A+GQRV VTCP + P QK+RF+LPI ++ A + Y KDGW R L D KF W R+D + E T + V +L R F++ ++ L L P +E D++V +N+ ++ Q P F+ K F+E C LR W GHM + VRR HLL DS+ A +S +MRKI+RFEF+ E G+DAGG+AREW++ V+ LF+PDFGLF S +QM M+I+ S L P+ H YFRFLGR++GKAL DGQ++ H+VR + KHILGWPV+ D+E D E NL L ++D + DLCL+FT TE G + VELV GG + + +NL ++LEAN ++ L DRVK QL ELLLGFY+ +PE LL++FDFQ+LELL+ G+P +D++DW+ NT Y G+F R GA H+ QWFWEVVR +FD +RA+LLQFTTG+SGVPA+GF+ LQGNDGNI+KF ++ I +QS+FPRAHTCFNRIDLP Y +K++L+E+L +A+ +GF IE
Sbjct: 1 MFEVVVPAGVQPNQQFSLIANGQRVLVTCPPNVSPGQKVRFELPIRNGKDDDSPAVHLDYEDIKDGWCRTLRVTDYKFQWIRMD-EDGEIDLTPSPVFDIKHSALTR---------RLVFLQGNDARMRTGKLSLGPANESWSDSSVHVDGKEVINYTEIAAAQQRPRFEDKSRVFQEMCREKLRVDWSEGHMRVLVRRQHLLHDSIDAVMSLSRDDMRKIWRFEFMSEVGVDAGGLAREWFELVSKKLFDPDFGLFLPSATNQMAMRINPDSELACPEDHLIYFRFLGRVMGKALFDGQLIAGHMVRHLYKHILGWPVMFEDLEIPDEEYYNNLKSLLDLDN--VEDLCLNFTFTETAFGVNRDVELVEGGEEIDVTNDNLPEFLEANFKYHLMDRVKPQLTELLLGFYDVIPEPLLTMFDFQELELLMSGLPEIDVDDWMANTLYQGQFERRGAMHKSCQWFWEVVR-EFDHAERAKLLQFTTGSSGVPARGFSVLQGNDGNIKKFALSGIRKEQSLFPRAHTCFNRIDLPCYSSKEELREKLKIALATSVTGFDIE 546
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|1210527483|dbj|GAX13768.1| (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris]) HSP 1 Score: 521.546 bits (1342), Expect = 2.286e-170 Identity = 301/771 (39.04%), Postives = 423/771 (54.86%), Query Frame = 0
Query: 63 TEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPG----------------------------------------DLIAIEFQAS-------TFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRFSLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQLQAYEMRYNKD--GWVRCLG-QDVKFHWFRVDGSNRE---------QGGTANAVV--GGVGGSLGRPKNGKFSIE--------NTAFVRAF------KGPPQSPDLVLLPPSEVSIDTTV---PGTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHR-YFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
T PGA+++ Q+ +V +P GVRPG F V ++V VRCP +SPG D+ A+ QA TF+V +P V PGQ F V V G R VTCP P ++R +PP +P +++EV VP GV+PG+PF L+A+ QRV VTCP + P QKIRF+LP+ + + E+ Y + GW R + D+KF W R++ E G +N + G+ R K +E +A+VR ++ + L+P E +D+ + T L++ ++ +K E+F C L WE GH++I VRR+ LL DS+ A + ++RK +R EFLGEPGIDAGGVAREW++ VT+ +F+P FGL+ S +Q C+ I+ +SGL P+ H YFRFLGR++G+AL D Q+++ H+V+ + KHILGWP+ D++ D E +L KL +M+ + + LDFTVTE +G +EL GGA + NL+ YLE+NLR+R+ +R + QL+ELLLGF++ +PE L+IFD +LEL LCG+P +D+EDW NT Y G + G H VQWFWEVV +FDQEQRARLLQF TGTSGVP++GF+ LQG DGNI+KFTI+ + +PRAHTCFNRIDLP Y +K++L E+L AI + GF IE
Sbjct: 126 TRPGAYQVTRTAVGPAQV-YRVTVPVGVRPGAEFTVHAGLRRVRVRCPPTSSPGQSLQITLPPEPVTHHLLLKMAPLTAAEGTPEGGGAVTMTPDVQAVNRQAKLSGGTAQTFLVTIPPNVHPGQQFTVNVGGQRFAVTCPPTAGPNQKVRI-VPPVV---------------------REEPEAAPTTQVFEVAVPDGVQPGQPFALMANDQRVLVTCPPNVVPGQKIRFQLPV---SHLVGKIELAYESETSGWRRTVRVNDLKFQWVRLEKKKEEEEEEEDEDGNKGNSNKTTHEDPLAGTTERTVQSKVDVEGMKQFDFRRSAYVRKVCYLEGNDARMRTGTIELIPAHEAVVDSRLVYHNRTLLSYSDIASVQGKSLQEKTEWFHNICGQLTAAWEDGHIKIAVRRSMLLQDSVDAVMSLGRDDLRKRWRIEFLGEPGIDAGGVAREWFELVTEQIFDPAFGLWIPSANNQACVNINPSSGLSCPEDHLIYFRFLGRVIGRALFDRQLIKGHMVQSIYKHILGWPITFEDIKAQDEEYYHSLQKLTKMEDVSI--MYLDFTVTEESMGARREIELTEGGALTEVTNANLELYLESNLRYRMLERTRPQLQELLLGFFDVIPEPPLTIFDANELELTLCGLPTIDMEDWQANTKYSGLYEMAGRSHETVQWFWEVVVEEFDQEQRARLLQFVTGTSGVPSRGFSVLQGIDGNIKKFTIHGVDRKAYFYPRAHTCFNRIDLPNYSSKEELLEKLKAAISLSGIGFDIE 868
BLAST of EWM28785.1 vs. NCBI_GenBank
Match: gi|397611542|gb|EJK61369.1| (hypothetical protein THAOC_18147 [Thalassiosira oceanica]) HSP 1 Score: 486.493 bits (1251), Expect = 2.872e-155 Identity = 266/651 (40.86%), Postives = 390/651 (59.91%), Query Frame = 0
Query: 127 TFIVQVPEGVQPGQTFDVMVRGARQRVTCPDGVRPGMQIRFSLPPASDGGGLGGAGGPGGSTGGGTGSSNTSGPSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTN-----EQLQAYEMRYNKDGWVRCL-GQDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFK-----GPPQSPDLVLLPPSEVSIDTTVPGTR----LNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASG-----LVEPQHHR-YFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDP--SVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754
T V++ Q T +RG R + + RPGM +R PP SD L P S+ ++++EV+VP+GV PG+PF LLA G RV VTCP +A QKIRF LPI +L ++ Y+KDGW R + D+KF W R D E GG + +F +A+V + + L+ P + +D+ + +++ +++ ++ KI++F+E R +LL+DS+ A +S ++RK++RFEF+GE GID GG+AREW++ VTD +F+PD GL+Q S +QMCMQI+ ASG + P+ H YFRF+GR++GKA+ D Q+V+ H+V+ + KHILGWPV+ +D++ +D E +L L++M + LC DFT TE G VELVPGGA++ + ENL +Y+EA+L+ RL R + QL ELLLGF++ +P+ LL+IFDFQ+LELL+CG+P +D+++W NT Y G++ R G H V WFWEVV +++DQE +ARLLQF TGTSGVPA GF LQGN+G++R+FTI+ ++L+ V+PR+HTCFNRIDLP+Y +K +L+E+L +AI M ++GF IE
Sbjct: 401 TVEVELKAHKQTDATAFARIRG-RAKGVPSEAARPGMSVRIVPPPPSDSPSLDRPRQPQRMANSNERSNEK------KQMFEVIVPEGVYPGQPFALLAGGVRVLVTCPKNAAAGQKIRFSLPIGLVKLDGPKSKLAEIKLSYDKDGWTRTIRASDMKFQWTRFD----ENGGVDTVT------------SQRFDDTKSAYVLKLDFHDDHDKMRHGSVSLVTPEKGFVDSNIESVSGQELVSYQDIANAQNKSYEDKIQWFQE------------------TREYLLSDSMEAVMSLSRKDLRKVWRFEFIGEAGIDVGGLAREWFELVTDEVFDPDMGLWQTSATNQMCMQINPASGEFISYIACPEDHLIYFRFIGRIMGKAMFDRQLVKGHMVKHLYKHILGWPVMFSDLKDIDEEYYNSLKGLKDMKDMGENIECLCADFTTTEETFGGKRVVELVPGGADIEVTEENLPEYIEASLKHRLLGRYEKQLNELLLGFFDVIPKPLLTIFDFQELELLMCGLPEIDMDNWKENTEYSGDYDREGPNHEVCGWFWEVV-SEYDQELKARLLQFVTGTSGVPANGFGSLQGNNGDVRRFTIHGVALETCVYPRSHTCFNRIDLPIYDSKDELEEKLKIAITMAATGFDIE 1009 The following BLAST results are available for this feature:
BLAST of EWM28785.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|