EWM30651.1, cds20 (CDS) Nannochloropsis gaditana

Overview
NameEWM30651.1
Unique Namecds20
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:63672..63704 +
Alignment locationCM002455.1:63863..63928 +
Alignment locationCM002455.1:64133..64302 +
Alignment locationCM002455.1:64468..64529 +
Alignment locationCM002455.1:64773..64860 +
Alignment locationCM002455.1:64984..65335 +

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Properties
Property NameValue
Protein idEWM30651.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100242g3.5819.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:63672..63704 +
CM002455.1supercontigCM002455.1:63863..63928 +
CM002455.1supercontigCM002455.1:64133..64302 +
CM002455.1supercontigCM002455.1:64468..64529 +
CM002455.1supercontigCM002455.1:64773..64860 +
CM002455.1supercontigCM002455.1:64984..65335 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30651.1 vs. NCBI_GenBank
Match: gi|585113345|gb|EWM30651.1| (hypothetical protein Naga_100242g3 [Nannochloropsis gaditana])

HSP 1 Score: 498.819 bits (1283), Expect = 3.271e-178
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0 
Query:    1 MVNRPLKRGVRDASCALAALSSAAAIHKHHHSKRSPVHTPRALTPSSSSSASGEGKGFAPSSQPARPSPRQQEGGHAKKEGRFTSGSTPGTILPTSQPPPPSPTHPSDNQASSLPTRLPLLPALTREGSSDSVRSDSGPRLPPTLALQNSSSAYPFPPSLLPSLSKASGAADEWRRRLTIEERMEVRGRLKTAYLHHVQEGDVEGLLEVGRREGGGGRRVSRGRAGSRERGGGREGMEGNADHVMRGLAPSVSPSL 256
            MVNRPLKRGVRDASCALAALSSAAAIHKHHHSKRSPVHTPRALTPSSSSSASGEGKGFAPSSQPARPSPRQQEGGHAKKEGRFTSGSTPGTILPTSQPPPPSPTHPSDNQASSLPTRLPLLPALTREGSSDSVRSDSGPRLPPTLALQNSSSAYPFPPSLLPSLSKASGAADEWRRRLTIEERMEVRGRLKTAYLHHVQEGDVEGLLEVGRREGGGGRRVSRGRAGSRERGGGREGMEGNADHVMRGLAPSVSPSL
Sbjct:    1 MVNRPLKRGVRDASCALAALSSAAAIHKHHHSKRSPVHTPRALTPSSSSSASGEGKGFAPSSQPARPSPRQQEGGHAKKEGRFTSGSTPGTILPTSQPPPPSPTHPSDNQASSLPTRLPLLPALTREGSSDSVRSDSGPRLPPTLALQNSSSAYPFPPSLLPSLSKASGAADEWRRRLTIEERMEVRGRLKTAYLHHVQEGDVEGLLEVGRREGGGGRRVSRGRAGSRERGGGREGMEGNADHVMRGLAPSVSPSL 256
The following BLAST results are available for this feature:
BLAST of EWM30651.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113345|gb|EWM30651.1|3.271e-178100.00hypothetical protein Naga_100242g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna20rna20Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications