EWM28676.1, cds1985 (CDS) Nannochloropsis gaditana

Overview
NameEWM28676.1
Unique Namecds1985
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:636379..636909 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28676.1
Productmapeg family protein
Orig transcript idgnl|cribi|Naga_100002g28.4795.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:636379..636909 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR023352MAPEG-like_dom
IPR001129Membr-assoc_MAPEG
Homology
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|585111099|gb|EWM28676.1| (mapeg family protein [Nannochloropsis gaditana])

HSP 1 Score: 361.303 bits (926), Expect = 2.546e-126
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
Query:    1 MSTFTISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVGCVIKVGVALIKSGSK 176
            MSTFTISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVGCVIKVGVALIKSGSK
Sbjct:    1 MSTFTISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVGCVIKVGVALIKSGSK 176          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|1183350450|gb|ORX78651.1| (membrane-associated proteins in eicosanoid and glutathione metabolism [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 116.316 bits (290), Expect = 4.798e-30
Identity = 64/169 (37.87%), Postives = 92/169 (54.44%), Query Frame = 0
Query:    3 TFTISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVGCVIKVGVALI 171
            + T+SPE+ + ++AAA +  + V +G+ V   R+ Y  D                         YPDMGSGR+A +L+ E W  FNNVQR H N++EQ+      +L+ GLF PK    L  +YI  R LYA GY + GP+GR AGAIL  +SLL M+  ++   + L+
Sbjct:    2 SITLSPEFAWPILAAAAMGFQLVAIGAGVGAARKKYKVD-------------------------YPDMGSGRFAAKLNDEDWVAFNNVQRSHQNYVEQISSAQIFVLLTGLFCPKFAGFLGFVYIAGRQLYANGYRASGPEGRRAGAILFNISLLTMLLTIVYSCLKLV 145          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|1183379330|gb|ORY04808.1| (hypothetical protein K493DRAFT_311201 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 111.309 bits (277), Expect = 5.174e-28
Identity = 63/162 (38.89%), Postives = 89/162 (54.94%), Query Frame = 0
Query:    3 TFTISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVGCVI 164
            +  I+P+Y + +IAA  +  + +  G AV   R+ Y                      VP    YPDMG+GR + +L  E+W  FNNVQR H N++EQ+    SL+L+GGL+ P+  A L  IYI+ RA+Y +GY   GP+GR  G I   LSLLG+VG  +
Sbjct:    2 SIVITPKYSWCVIAAVGMGFQLLLTGGAVAAARKKY---------------------NVP----YPDMGNGRLSTKLTDEEWTSFNNVQRTHQNYVEQISTAQSLVLLGGLYFPEVSATLGAIYILGRAIYTEGYKRVGPRGRIYGVIPIDLSLLGLVGVTL 138          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|1183342027|gb|ORX70957.1| (membrane-associated proteins in eicosanoid and glutathione metabolism [Linderina pennispora])

HSP 1 Score: 108.612 bits (270), Expect = 5.387e-27
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 0
Query:    6 ISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMV 160
            I   +GY ++AAA + ++  + G+ V+  R+ Y                         ++ YPD G GRY+ +L  E W  FNNV+R   N+ EQ+  V+S+L++ GL+QPK  A     Y+V R LY+ GY S+GPKGR AGA+L  +S LG+V
Sbjct:    5 IGTNFGYCVMAAAAMCVQCFFEGTRVVAARKKY-------------------------NVQYPDNGGGRYSDKLKDEDWVAFNNVKRVSDNYSEQIGMVLSVLILAGLYQPKLAASFGASYVVGRFLYSMGYRSKGPKGRMAGALLMTMSFLGLV 134          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|954192591|gb|KRX05346.1| (hypothetical protein PPERSA_00647 [Pseudocohnilembus persalinus])

HSP 1 Score: 108.997 bits (271), Expect = 6.454e-27
Identity = 70/169 (41.42%), Postives = 93/169 (55.03%), Query Frame = 0
Query:    6 ISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAF---PTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVGCVIKVGVALI 171
            +   Y YVLIAA  L LE    G   M  R+  FN E+ +KN +  + HKK       +P SLGYPDMG+G Y+ +L Y+ W+ FNN QR H NF + +  ++  LL+ GL  P   A L   + V R LYAKGY SQGP  RE GA L   S   ++G  +   + L+
Sbjct:    5 VPATYPYVLIAATALGLECHLTGFIGMKTRQRVFNKEFMEKNFE--EIHKKEIGQDEKIP-SLGYPDMGNGFYSQKLSYKDWYDFNNTQRIHQNFTDSIGYLIPSLLIAGLQFPLFSAGLGATHFVGRMLYAKGY-SQGPNKREIGAGLSHGSTFAILGTSLFSAIRLL 169          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|403369117|gb|EJY84401.1| (MAPEG family protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 107.842 bits (268), Expect = 1.789e-26
Identity = 59/158 (37.34%), Postives = 90/158 (56.96%), Query Frame = 0
Query:    1 MSTFTISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSL-GYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLL 157
            MS   ++ +Y YV + A+L+  +    G    G R+ +F  E+ K N    +EH+K FP    S   YPDMG+GRY+ +L Y+ W+ FNN QR H+N+LE    V++ LL+ GL          ++Y+++R +YA GY+++GP GR  G  L   S L
Sbjct:    1 MSGLVLTDDYRYVALIASLIGFQLTVTGFWAGGQRKKHFTPEFLKDN--FQEEHEKHFPGTQVSKEAYPDMGNGRYSQKLPYKSWYEFNNAQRVHYNYLESATIVITWLLIAGLRYEWVAVGAGSVYLLARLIYAIGYAAKGPAGRVIGFALAFFSSL 156          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|1000783326|gb|KXN74461.1| (hypothetical protein CONCODRAFT_82924 [Conidiobolus coronatus NRRL 28638])

HSP 1 Score: 103.605 bits (257), Expect = 4.117e-25
Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 0
Query:    3 TFTISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVG 161
            + TI+ +YGYVL+ +  + ++       V  LR++                          ++ YPD GSGRYA +L  E+W  FNN QR HHN++EQ      LLL  G+F P   A  +  YIV R LY  GY   GPKGR  GAI+  L+L+ ++G
Sbjct:    2 SITIAKDYGYVLLGSTAIAIQCFLSALPVSKLRKS-------------------------LNVPYPDTGSGRYAKKLTDEEWELFNNAQRAHHNYVEQHTITQVLLLTAGVFNPIYAAYSSVAYIVGRQLYQNGYIKNGPKGRMVGAIVLDLALVALIG 135          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|909143648|gb|KNE67894.1| (hypothetical protein AMAG_12612 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 102.834 bits (255), Expect = 9.013e-25
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 0
Query:    1 MSTFTISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVGCVI 164
            MST T+  ++G V+++  +L    V     VM  R+                            + YPDMG+GRYA +L   QW  FN+ QR H N+LEQ+  V +++ + GLF PK  A L  +Y V R +Y  GY + GP+GR AG  L   +  GMVG  I
Sbjct:    1 MSTITLPEDFGMVVLSLVVLNFHYVSSSRYVMAARKK-------------------------LKIDYPDMGNGRYAAKLTDAQWHEFNSAQRAHQNYLEQLPVVNTIVFLSGLFNPKWTAGLTALYAVGRQMYTSGYVTNGPQGRVAGTRLFYPAFFGMVGITI 139          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|1134814650|gb|OMJ21175.1| (Microsomal glutathione S-transferase 3 [Smittium culicis] >gi|1134815025|gb|OMJ21435.1| Microsomal glutathione S-transferase 3 [Smittium culicis])

HSP 1 Score: 102.449 bits (254), Expect = 1.206e-24
Identity = 56/157 (35.67%), Postives = 87/157 (55.41%), Query Frame = 0
Query:    5 TISPEYGYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLGMVG 161
            T+  EY + L+AA ++ L+    G +V+G R+ Y  D                         YPDMGSGRY+ +L  ++W  FN++ R H N++EQ+   +  +LV GLF P   A+   +YIV R +Y+ GY + GPKGR AGA++ +L+++  VG
Sbjct:    3 TVGNEYAWNLLAATVMGLQCFAAGMSVVGARKKYKVD-------------------------YPDMGSGRYSAKLSDKEWVEFNSIMRVHQNYIEQLPLAILSVLVNGLFNPIQSAIAGDVYIVGRFIYSHGYKAYGPKGRMAGAMISMLAIVFNVG 134          
BLAST of EWM28676.1 vs. NCBI_GenBank
Match: gi|678337020|emb|CDW75688.1| (mapeg family protein [Stylonychia lemnae])

HSP 1 Score: 102.449 bits (254), Expect = 2.064e-24
Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 0
Query:   11 GYVLIAAALLVLEGVYLGSAVMGLRRAYFNDEWQKKNNDLMDEHKKAFPTVPFSLGYPDMGSGRYAGRLDYEQWFRFNNVQRGHHNFLEQVWGVMSLLLVGGLFQPKTFAVLATIYIVSRALYAKGYSSQGPKGREAGAILGILSLLG 158
            G   ++  L+VLE   +  A +  R   FN E+  + ++   +H+K       +LGYPD G+GRYA RL+Y  WF FNN QR H+NFLEQ+  ++  + +G  +QP   A+L  +Y   R  Y+ GY  + PK R AGAI+  L  +G
Sbjct:   13 GLAFLSILLIVLEYEMVTIAQVFKRGKVFNKEFMSQFDE---QHEKEVGGKAPALGYPDTGNGRYAARLNYGDWFSFNNWQRVHYNFLEQITPMIIWIFIGSFYQPLAAAILGFVYFFGRIFYSIGY-CKSPKHRTAGAIICDLGYIG 156          
The following BLAST results are available for this feature:
BLAST of EWM28676.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111099|gb|EWM28676.1|2.546e-126100.00mapeg family protein [Nannochloropsis gaditana][more]
gi|1183350450|gb|ORX78651.1|4.798e-3037.87membrane-associated proteins in eicosanoid and glu... [more]
gi|1183379330|gb|ORY04808.1|5.174e-2838.89hypothetical protein K493DRAFT_311201 [Basidiobolu... [more]
gi|1183342027|gb|ORX70957.1|5.387e-2737.42membrane-associated proteins in eicosanoid and glu... [more]
gi|954192591|gb|KRX05346.1|6.454e-2741.42hypothetical protein PPERSA_00647 [Pseudocohnilemb... [more]
gi|403369117|gb|EJY84401.1|1.789e-2637.34MAPEG family protein (macronuclear) [Oxytricha tri... [more]
gi|1000783326|gb|KXN74461.1|4.117e-2536.48hypothetical protein CONCODRAFT_82924 [Conidiobolu... [more]
gi|909143648|gb|KNE67894.1|9.013e-2535.37hypothetical protein AMAG_12612 [Allomyces macrogy... [more]
gi|1134814650|gb|OMJ21175.1|1.206e-2435.67Microsomal glutathione S-transferase 3 [Smittium c... [more]
gi|678337020|emb|CDW75688.1|2.064e-2438.51mapeg family protein [Stylonychia lemnae][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1990rna1990Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications