EWM28758.1, cds1982 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|585111181|gb|EWM28758.1| (twinfilin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 756.903 bits (1953), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query: 1 MRAHLSVSDGLLAACQPLHTVTSTRLLHIKIEAECLVLAEPPIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMDDHPPVLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETHELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQHVFVFYCPQTASIKQKFTFSAAKSTLIEALGGYNIFDRIVEATDPNVTIQSLMSCSRGCKECVDHSDVLHHPLLTETRPRGPKRPSARSILSETGFAT 368
MRAHLSVSDGLLAACQPLHTVTSTRLLHIKIEAECLVLAEPPIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMDDHPPVLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETHELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQHVFVFYCPQTASIKQKFTFSAAKSTLIEALGGYNIFDRIVEATDPNVTIQSLMSCSRGCKECVDHSDVLHHPLLTETRPRGPKRPSARSILSETGFAT
Sbjct: 1 MRAHLSVSDGLLAACQPLHTVTSTRLLHIKIEAECLVLAEPPIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMDDHPPVLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETHELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQHVFVFYCPQTASIKQKFTFSAAKSTLIEALGGYNIFDRIVEATDPNVTIQSLMSCSRGCKECVDHSDVLHHPLLTETRPRGPKRPSARSILSETGFAT 368
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|402225133|gb|EJU05194.1| (actin depolymerizing protein [Dacryopinax primogenitus]) HSP 1 Score: 74.7146 bits (182), Expect = 2.982e-11 Identity = 76/283 (26.86%), Postives = 135/283 (47.70%), Query Frame = 0
Query: 24 TRLLHIKIEAECLVLAEP-PIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMDDHPP-VLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETHELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLS-TSLYGELAPTERA----VARNVGVR-LHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERD---MERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQH---VFVFYCPQTASIKQKFTFSAA 292
TR++ + I+ E LV+++ P+ S D QH + ++ A +TAA LL+ +D VL+ Y+P TC VR+KMLY+S+ L RGL D +F++ LA + ++ P L+ ++ ELA A +AR+ R LH S + F +D + EL E +++V+ ++T E+D ++ ++D L+S+LP EP ++++ + + +FV++CP AS+K+K +S +
Sbjct: 24 TRVIKVSIDNELLVVSKTLPLTS--SLSSDVQH--ISSIVDA-DTAAYLLVQLDSKGKWVLVSYVPDTCTVRQKMLYASTRNALTRGLG-------AAAFVDSAFISAPSDLASTLVSRSTSSTGGGPARSATSPGLIPLSNGEKELASIRAAEAVELARSTTPRSLHQRSDMQFEEDADAAIS--------------ELNDGEGQVVVLGIKTGK-EKDVFVLKNKEDVPHGQG--LASVLPKGEPSYVLYALSVNGNRVILFVYFCPNDASVKEKMVYSTS 277
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|669168323|ref|XP_008619606.1| (hypothetical protein SDRG_15217 [Saprolegnia diclina VS20] >gi|530728762|gb|EQC27004.1| hypothetical protein SDRG_15217 [Saprolegnia diclina VS20]) HSP 1 Score: 73.1738 bits (178), Expect = 7.438e-11 Identity = 85/319 (26.65%), Postives = 145/319 (45.45%), Query Frame = 0
Query: 5 LSVSDGLLAACQPLHTVTSTRLLHIKIEAECLVLAEP-PIKKIGSEEDDFQHLVVERLMQAPNTAALLL---IAMDDHPP--VLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETH--ELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQHVFVFYCPQTASIKQKFTFSAAKSTLIEALGGYNI-FDRIVEATD 314
L V D L Q STR L +K+E E LV A P+ + + E + ++ QA TA LL IA + P +LI ++ T P REKMLY+S+ L++ L + + + + H +L +F ++ T+ N+ PL + L E + R++ V+ MS +PF + AL P ++ L L+ E ++V + +P N+ ES LSS + P ++++ + VF++ CP A ++ K T+S AK++++ L ++I D+ +E TD
Sbjct: 6 LRVGDALTTLFQQAQDGNSTRCLDVKVENETLVCATAFPVDE--APEAQWANI------QASTTAPSLLLFHIASSNGPWKWILIAHVADTLPAREKMLYASARDCLKQQLGLSYFVGDVHTTDLAAFTFHDVLSTM-------HNNS-----------GPLSEKEV---LLKEEARLERDLSVKASAMSVMPFGLTPACAAALDTFAIATSPA-FLSLHLENEALVV--AKALP----------NVHESL--LSSEMTKHAPSYVLYRVSSTGVVFLYVCPDDAPVRAKMTYSTAKASVLALLPAHHIAIDKTIEITD 280
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|1022805706|ref|XP_016211982.1| (hypothetical protein PV09_06604 [Verruconis gallopava] >gi|759225120|gb|KIW02113.1| hypothetical protein PV09_06604 [Verruconis gallopava]) HSP 1 Score: 73.1738 bits (178), Expect = 8.241e-11 Identity = 88/335 (26.27%), Postives = 147/335 (43.88%), Query Frame = 0
Query: 1 MRAHLSVSDGLLAACQPLHTVTSTRLLHIKIEAECLVLAEPPIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMDDHPPVLIKYLPLTCPVREKMLYSSSVADLRRGLAI-HFSLFETHELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNV-GVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVF-------TQQDSQHVFVFYCPQTASIKQKFTFSAAKST---LIEALGGYNIFDRIVEATDPN-VTIQSL 322
M++ +S S L+ A + L T S+R L + I+ E LV +E S DD +L P L A D V I Y+P T VR+KML++S+ L R L + +FS E +E L G W+ E A+ E+PL T L + A A V G G + ++ E +V + T + + L + + + IV+A P + D L+S + EPR+ ++ + Q++ +F++ CP +KQ+ +++++ + L E G + D+ +EA+DPN +T QS+
Sbjct: 1 MQSGISASQELIEAFKSLQTEPSSRGLLVTIKNEVLVPSETIPSTSSSFSDDLSNLASHLTPVQPLYILLRQDAPKDKTFVAITYVPNTAHVRQKMLFASTRLTLARELGLENFS--EQIFVESADELTAEG----WKKHESHVAL---------ENPL--TEEEQNLVEIKNAEATEVGGTSRRGAGYGSSGLKMQAGEGVVAAISTLQERGLVMLKIDDNESIVLA---EPPSSGVSTSD---------LASHISATEPRYSIYKHSYSGASGQETAAIFIYTCPTATKVKQRMLYASSRRSAEVLAEQEAGLKL-DKKIEASDPNDITAQSI 305
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|1173951900|gb|OQR99681.1| (twinfilin-like protein [Achlya hypogyna]) HSP 1 Score: 72.7886 bits (177), Expect = 1.102e-10 Identity = 94/365 (25.75%), Postives = 167/365 (45.75%), Query Frame = 0
Query: 5 LSVSDGLLAACQPLHTVTSTRLLHIKIEAECLVLAEP-PIKKIGSEEDDFQHLVVERLMQAPNTA-ALLLIAMDD-HPP---VLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETHELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQHV-FVFYCPQTASIKQKFTFSAAKSTLIEALGGYNI-FDRIVEATDPNVTIQSLMSCSRGCKECVDHSDVLHH----PLLTETRPRGPKRPSA 357
L V D L + Q + STR L +KIE E L+ A+ P+ D Q V +QA TA +LLL+ ++ + P VLI ++P + P REKMLY+S+ L++ L + + + + H + +F +R + +AT + G PL + L E + R++ V+ MS +PF + + +++ + L+ E + V+ + +P + VHLS L P ++++ D + V F++ CP A ++ K T+S AK++++ L +NI D+ +E TD ++++ SD+ H P+L + P+ RP+A
Sbjct: 6 LRVGDALASIFQRVQEDRSTRCLDVKIEGEELLCAQTFPVA------GDVQAEWVA--IQAGTTAPSLLLVHIESSNGPWKWVLIAHVPDSLPAREKMLYASARDCLKQQLGLSYFVGDVHTTDLATF--------GYR-----DVLATTHNNIG---PLSEKEV---LLKEEARLERDLSVKASAMSVMPFGIAP---ACAAALDAFASGGSFLSMQLENETLTVL--KQLPATHE------------VHLSLELARHVPSYVLYRHSDRRLVVFLYVCPDDAPVRLKMTYSTAKASVLALLPAHNITVDKTIEITDVATALEAI------------QSDIAHEEAEAPVLVQ--PKAFSRPAA 312
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|698778909|ref|XP_009822498.1| (hypothetical protein H257_01140 [Aphanomyces astaci] >gi|574122159|gb|ETV87635.1| hypothetical protein H257_01140 [Aphanomyces astaci]) HSP 1 Score: 68.5514 bits (166), Expect = 2.784e-9 Identity = 79/330 (23.94%), Postives = 142/330 (43.03%), Query Frame = 0
Query: 5 LSVSDGLLAACQPLHTVTSTRLLHIKIEAECLVLAEPPIKKIGSEEDDFQHLVVERLMQAP-NTAALLL--IAMDDHP--PVLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETH--ELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQHVFVFYCPQTASIKQKFTFSAAKSTLIEALGGYNIF-DRIVEATDPNVTIQSLMSCS 326
L VS+ L Q + R + K+ E LV + K+ + Q +QA +T +L+L IA + P +L+ + T P R+KMLY+S+ L++ L + + + + H L ++ ++ T+ T P+ D L E + R++ V+ M+ +PF M + AL+ + W+ + + E+++V A + + + D Q S V SL+ D+P F FV+ CP+ A+++ K T+S AK++L+ L I D +E TD +++L S
Sbjct: 6 LRVSEPLATQFQTAQETNTVRCIEAKVTGEQLV-----VNKVFQIHEGVQADAEWASIQAECSTPSLVLFHIATSNGPLKWILVASVCDTLPARDKMLYASARDCLKQQLGLAYFVGDVHTTNLSAFTYRDVVSTMH----------TTTGPLSD-----------REVLLKEEALLERDLSVKSSAMNVLPFGMSAACDTALIAFSKKGTSSTWLSMRMTNEELVVDASVHITRDDQINALVDKEQPSFVLYRSLV--DDPTPTTF--------FVYICPEAANVRLKMTYSTAKASLLHDLQRRGILVDSTIEVTDAWNVLEALQGNS 299
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|301121574|ref|XP_002908514.1| (twinfilin-like protein [Phytophthora infestans T30-4] >gi|262103545|gb|EEY61597.1| twinfilin-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 67.781 bits (164), Expect = 4.033e-9 Identity = 72/283 (25.44%), Postives = 130/283 (45.94%), Query Frame = 0
Query: 25 RLLHIKIEAECLVL-AEPPIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMDDHPP----VLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETH--ELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQ---DSQHVFVFYCPQTASIKQKFTFSAAKSTLI 297
R + + IE E VL A P +D + LV L AA +L+ D + VL+ ++P + VR++MLYSSS L++ L +++ E H EL ++++ + R A AP+ + S L E A E R+ V+ M VPF + +VR+ L R+L+ K +W+ + L E+ V V+++ +N+Q + + + L P F+ + + S +F++ CP+ + ++ K +S K+T++
Sbjct: 25 RFVKVSIEGESFVLSAAGPAS--SEPRNDVEQLVTSNL--NAEQAAFVLLCPDTNVAALRWVLLAFVPESVSVRDRMLYSSSRDSLKKQLGLNYFSGEFHATELSEVTWASFLEA--------RKKQAADAPLSE-------SERLLKEAALLE----RDTNVKSSAMGVVPFEITQNVRDKL-RLLQDNKF-DWIAMKLSEDNESVEVVKSL----------ENVQ--LIDVPTTLDRRSPSFVAYRYRAGATSALIFMYVCPEDSPVRLKMVYSTCKATVL 270
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|1018857342|dbj|GAT59664.1| (protein tyrosine kinase [Mycena chlorophos]) HSP 1 Score: 67.0106 bits (162), Expect = 9.586e-9 Identity = 97/382 (25.39%), Postives = 153/382 (40.05%), Query Frame = 0
Query: 5 LSVSDGLLAACQPLHTVTSTRLLHIKIEAECLV-LAEPPIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMDDHPPVL-IKYLPLTCPVREKMLYSSSVADLRRGLA---IHFSLFETHELEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPL---LSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDS----QHVFVFYCPQTASIKQKFTFSAA-------KSTLIEALGGYNIFDRIVEATDPNVTIQSLMSC-------------SRGCKECVDHSDVLHHPLLTETRPRGPKR 354
+ V+D L A TR + + IE E LV A PI GS +D Q L + +++ NT A LL +DD L I Y+P T VREKMLY+SS A L + L S+F T S +LT A R + +A P+ + + L G L+ + + AR H V DV+EA+ L +E ++VI+ T+ + + Q SA L + LP D + F + S + +F++ CP + +KQ+ ++ TL+E + R +E ++P ++ + + G + + P +PRGPKR
Sbjct: 7 IEVTDQLRDAFSAAVESKQTRFIKVSIEKENLVHSASIPIG--GSLHEDLQLLASDEILEE-NTPAYLLTKLDDSAEWLVIYYVPDTAKVREKMLYASSRASLLKSLGSSTFSDSIFAT------SKADLTPDA---YAAHRKHVLAPKPLSSAEQEMADIRAAERLAGGLSAYQGSRARTT----HIGQTVGMGWTEDVQEAV------------KALGDGDESVLVIS--TIDMSSETVVLQSSSQVSADALGAALPPDTACYAFFAWKHSPSQREIIFIYSCPSGSPVKQRMVYATGFNGVYMTAKTLLEG-ASTPLHSRKIETSNPGEINEAFLRSELDFTGSAGGSAPASGTQTPAGGQEEQKKPF---AKPRGPKR 354
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|1183475339|gb|ORY99196.1| (hypothetical protein BCR43DRAFT_488883 [Syncephalastrum racemosum]) HSP 1 Score: 64.6994 bits (156), Expect = 5.605e-8 Identity = 80/318 (25.16%), Postives = 144/318 (45.28%), Query Frame = 0
Query: 23 STRLLHIKIEAECL-VLAEPPIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMD------DHPPVLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETHELEDMSFL-NLTGTLA---CWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMS-------HVPFTMRSDVREALVRVLETR--KPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDS---QHVFVFYCPQTASIKQKFTFSAAKSTLIEALGGYN--IFDRIVEATDP 315
+TR+L + I E L V P++ G+ E D+ H++ + P A +L+ +D ++ + + ++P VR+KMLY+S+ A L T EL D F N+ GT W ++ A A ++PL T ELA ++A AR G + H+ + + +V+ AL + + + +P N++ L L EKI++ + N+ +H ++ P D PRF F +++ VFV+ CP ++ I+++ +S +K+ I+ G D+ +E +DP
Sbjct: 25 NTRILRVSIIDEALSVNGTTPVE--GTFEQDYAHVLGYLDDKVP---AYVLVRLDTKNSEGEYNWLFLAHVPDNAKVRDKMLYASTRATL------------TKELGDNRFSDNMYGTDKNEFSWEGYKKHLAHKNA------DAPL--TQRERELAEIKQAEAR-AATDYQGTTSRQTFSPHITYPIADEVKTALSELTKPKDERPHNFVTLHLVNEKIVLDSAA-------------NVSTDQIH-RTIDPKD-PRFTFFIMENNGAEHKVFVYSCPSSSKIRERMLYSCSKNFAIKGAEGECGLTVDKKLETSDP 301
BLAST of EWM28758.1 vs. NCBI_GenBank
Match: gi|665812647|ref|XP_008554846.1| (PREDICTED: twinfilin isoform X3 [Microplitis demolitor]) HSP 1 Score: 63.929 bits (154), Expect = 8.793e-8 Identity = 77/310 (24.84%), Postives = 134/310 (43.23%), Query Frame = 0
Query: 11 LLAACQPLHTVTSTRLLHIKIEAECLVLAEPPIKKIGSEEDDFQHLVVERLMQAPNTAALLLIAMDDHPP------VLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETHE--LEDMSFLNLTGTLACWRATERGNAIATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQH-------VFVFYCP-QTASIKQKFTFSAAKS---TLIEALG 301
L A C+ R+L + IE E L + K +G +DD+ LV + + A N A +L +D P + I + P PVR+KMLY+S+ A L++ E H LED+ TL + ++ +A A AP+ E + EL T NV R +S V F + + ++A+ + + +++ L EEKI ++ V ++ L + +P D R+ ++ + + VF++ P + SIK++ +S+ K+ LI++LG
Sbjct: 16 LFAKCRD----GKIRVLKVSIENEELTPSTSS-KPVGKWQDDYNKLV--KPLIAENQPAYILFRLDTKSPDSGYDWLFISWSPDNAPVRQKMLYASTKATLKQEFGTASIKDELHGTVLEDV-------TLEGYNRHKKNDA-APAPLTSAEEELV-------ELKKTAIHTDYNVETRHQTLSGVAFPVTDEAKQAITDMGKGIHEYVQLKIDLDEEKIHLVMTGDVSLDK---------------LPTKVPADSARYHLYNFKHTHEGDYTEAIVFIYSMPGYSCSIKERMLYSSCKAPLLDLIQSLG 288 The following BLAST results are available for this feature:
BLAST of EWM28758.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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