EWM28680.1, cds1975 (CDS) Nannochloropsis gaditana

Overview
NameEWM28680.1
Unique Namecds1975
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:617046..618365 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28680.1
Productphenylalanyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100002g38.4799.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:617046..618365 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0043039tRNA aminoacylation
GO:0006432phenylalanyl-tRNA aminoacylation
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003723RNA binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0000287magnesium ion binding
GO:0000049tRNA binding
GO:0004826phenylalanine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II
IPR002319Phenylalanyl-tRNA_Synthase
IPR004530Phe-tRNA-synth_IIc_mito
IPR005121PheS_beta_Fdx_antiC-bd
Homology
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|585111103|gb|EWM28680.1| (phenylalanyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 911.368 bits (2354), Expect = 0.000e+0
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0
Query:    1 MKAMAPILLACCMSGASAAAAADGFMTRCTRAFVWPMAPKMTSFAARRTFCTRHALISAASTVAEGKALDGRVHTEHPMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGVAVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            MKAMAPILLACCMSGASAAAAADGFMTRCTRAFVWPMAPKMTSFAARRTFCTRHALISAASTVAEGKALDGRVHTEHPMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGVAVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR
Sbjct:    1 MKAMAPILLACCMSGASAAAAADGFMTRCTRAFVWPMAPKMTSFAARRTFCTRHALISAASTVAEGKALDGRVHTEHPMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGVAVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|695393914|ref|XP_009520740.1| (hypothetical protein PHYSODRAFT_326460 [Phytophthora sojae] >gi|348685637|gb|EGZ25452.1| hypothetical protein PHYSODRAFT_326460 [Phytophthora sojae])

HSP 1 Score: 465.307 bits (1196), Expect = 1.960e-159
Identity = 235/420 (55.95%), Postives = 287/420 (68.33%), Query Frame = 0
Query:   21 AADGFMTRCTRAFVWPMAPKMTSFAARRTFCTRHALISAASTVAEGKALDGRVHTEHPMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            AA G   RC      P A +  +  A R   TR            G  L+  +    P  NV  +++ KIG +LHR P+HPL IIK +IEGYF +     G      FD+L PVV   + FD +L+P DHVSR   DTYYVD+ +VLR HTSAH+   + KG  AFLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFGDVE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RF  QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:    5 AAQGIGARCAVMTRRPSALQGVNKCAARALATR------------GPELEW-MKNRDPYCNVGESIASKIGVNLHRQPNHPLHIIKTKIEGYFDDLHQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDENRVLRAHTSAHEVATMKKGFTAFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKDLFGDVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFISQFKDGQITKFKPYSKYPECFKDVSFWHDD--NFHENNLCEVVRDIAGDMVEQVAVVDEFTHPKTQRKSKCYRITYRHMDRNLTNSEVDEIQEVVRARMVKDLGVELR 408          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|570985649|gb|ETP44867.1| (phenylalanine-tRNA ligase [Phytophthora parasitica P10297])

HSP 1 Score: 462.611 bits (1189), Expect = 1.372e-158
Identity = 222/363 (61.16%), Postives = 268/363 (73.83%), Query Frame = 0
Query:   78 PMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            P  NV  +++ KIG  LHR P+HPL IIK +IEGYF       G      FD+L PVV   + FD +L+P DHVSR   DTYYVD  +VLR HTSAH+   + KG  +FLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFGDVE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RFT QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:   40 PYCNVGESIAAKIGVSLHRQPNHPLHIIKTKIEGYFDNLHQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDQNRVLRAHTSAHEVATMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKELFGDVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFTSQFKDGEITKFKPYSKYPECFKDVSFWHDDT--FHENNLCEVVRDIAGDMVEQVAIVDEFTHPKTQRTSKCYRITYRHMDRNLTNSEVDEIQEIVRAKMVKELGVELR 399          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|567961404|gb|ETK86946.1| (phenylalanine-tRNA ligase [Phytophthora parasitica] >gi|567990127|gb|ETL40361.1| phenylalanine-tRNA ligase [Phytophthora parasitica])

HSP 1 Score: 462.611 bits (1189), Expect = 1.387e-158
Identity = 222/363 (61.16%), Postives = 268/363 (73.83%), Query Frame = 0
Query:   78 PMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            P  NV  +++ KIG  LHR P+HPL IIK +IEGYF       G      FD+L PVV   + FD +L+P DHVSR   DTYYVD  +VLR HTSAH+   + KG  +FLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFGDVE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RFT QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:   40 PYCNVGESIAAKIGVSLHRQPNHPLHIIKTKIEGYFDNLYQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDQNRVLRAHTSAHEVATMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKELFGDVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFTSQFKDGEITKFKPYSKYPECFKDVSFWHDDT--FHENNLCEVVRDIAGDMVEQVAIVDEFTHPKTQRTSKCYRITYRHMDRNLTNSEVDEIQEIVRAKMVKELGVELR 399          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|568049808|gb|ETM46774.1| (phenylalanine-tRNA ligase [Phytophthora parasitica])

HSP 1 Score: 462.225 bits (1188), Expect = 2.242e-158
Identity = 222/363 (61.16%), Postives = 268/363 (73.83%), Query Frame = 0
Query:   78 PMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            P  NV  +++ KIG  LHR P+HPL IIK +IEGYF       G      FD+L PVV   + FD +L+P DHVSR   DTYYVD  +VLR HTSAH+   + KG  +FLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFGDVE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RFT QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:   40 PYCNVGESIAAKIGVSLHRQPNHPLHIIKTKIEGYFDNLYQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDQNRVLRAHTSAHEVATMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKELFGDVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFTSQFKDGEITKFKPYSKYPECFKDVSFWHDDT--FHENNLCEVVRDIAGDMVEQVAIVDEFTHPKTQRTSKCYRITYRHMDRNLTNSEVDEIQEIVRAKMVKELGVELR 399          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|570327794|gb|ETO75742.1| (phenylalanine-tRNA ligase [Phytophthora parasitica P1976])

HSP 1 Score: 462.225 bits (1188), Expect = 2.793e-158
Identity = 221/363 (60.88%), Postives = 268/363 (73.83%), Query Frame = 0
Query:   78 PMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            P  NV  +++ KIG  LHR P+HPL IIK +IEGYF       G      FD+L PVV   + FD +L+P DHVSR   DTYYVD  +VLR HTSAH+   + KG  +FLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFG+VE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RFT QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:   46 PYCNVGESIAAKIGVSLHRQPNHPLHIIKTKIEGYFDNLHQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDQNRVLRAHTSAHEVATMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKELFGNVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFTSQFKDGEITKFKPYSKYPECFKDVSFWHDDT--FHENNLCEVVRDIAGDMVEQVAIVDEFTHPKTQRTSKCYRITYRHMDRNLTNSEVDEIQEIVRAKMVKELGVELR 405          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|568019364|gb|ETL93512.1| (phenylalanine-tRNA ligase [Phytophthora parasitica])

HSP 1 Score: 461.84 bits (1187), Expect = 3.110e-158
Identity = 221/363 (60.88%), Postives = 268/363 (73.83%), Query Frame = 0
Query:   78 PMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            P  NV  +++ KIG  LHR P+HPL IIK +IEGYF       G      FD+L PVV   + FD +L+P DHVSR   DTYYVD  +VLR HTSAH+   + KG  +FLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFG+VE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RFT QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:   40 PYCNVGESIAAKIGVSLHRQPNHPLHIIKTKIEGYFDNLHQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDQNRVLRAHTSAHEVATMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKELFGNVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENIGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFTSQFKDGEITKFKPYSKYPECFKDVSFWHDDT--FHENNLCEVVRDIAGDMVEQVAIVDEFTHPKTQRTSKCYRITYRHMDRNLTNSEVDEIQEIVRAKMVKELGVELR 399          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|970664438|gb|KUG01340.1| (Phenylalanine--tRNA ligase [Phytophthora nicotianae])

HSP 1 Score: 461.84 bits (1187), Expect = 3.750e-158
Identity = 221/363 (60.88%), Postives = 268/363 (73.83%), Query Frame = 0
Query:   78 PMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            P  NV  +++ KIG  LHR P+HPL IIK +IEGYF       G      FD+L PVV   + FD +L+P DHVSR   DTYYVD  +VLR HTSAH+   + KG  +FLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFG+VE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RFT QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:   46 PYCNVGESIAAKIGVSLHRQPNHPLHIIKTKIEGYFDNLHQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDQNRVLRAHTSAHEVATMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKELFGNVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFTSQFKDGEITKFKPYSKYPECFKDVSFWHDDT--FHENNLCEVVRDIAGDMVEQVAIVDEFTHPKTQRTSKCYRITYRHMDRNLTNSEVDEIQEIVRAKMVKELGVELR 405          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|566024107|gb|ETI47018.1| (phenylalanine-tRNA ligase [Phytophthora parasitica P1569])

HSP 1 Score: 461.455 bits (1186), Expect = 3.998e-158
Identity = 221/363 (60.88%), Postives = 268/363 (73.83%), Query Frame = 0
Query:   78 PMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            P  NV  +++ KIG  LHR P+HPL IIK +IEGYF       G      FD+L PVV   + FD +L+P DHVSR   DTYYVD  +VLR HTSAH+   + KG  +FLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFG+VE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RFT QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:   40 PYCNVGESIAAKIGVSLHRQPNHPLHIIKTKIEGYFDNLYQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDQNRVLRAHTSAHEVATMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKELFGNVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFTSQFKDGEITKFKPYSKYPECFKDVSFWHDDT--FHENNLCEVVRDIAGDMVEQVAIVDEFTHPKTQRTSKCYRITYRHMDRNLTNSEVDEIQEIVRAKMVKELGVELR 399          
BLAST of EWM28680.1 vs. NCBI_GenBank
Match: gi|675193167|ref|XP_008905468.1| (phenylalanine-tRNA ligase [Phytophthora parasitica INRA-310] >gi|568094125|gb|ETN08907.1| phenylalanine-tRNA ligase [Phytophthora parasitica INRA-310])

HSP 1 Score: 461.455 bits (1186), Expect = 4.176e-158
Identity = 221/363 (60.88%), Postives = 268/363 (73.83%), Query Frame = 0
Query:   78 PMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGV-AVECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLESRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439
            P  NV  +++ KIG  LHR P+HPL IIK +IEGYF       G      FD+L PVV   + FD +L+P DHVSR   DTYYVD  +VLR HTSAH+   + KG  +FLV+GDVYRRDEID +HYPVFHQMEGVRIF  L ++   REE V  V+++LK+ LEGM   LFG+VE RWV+ YFPFT+PS ELEI++N +WLEVLGCGV+QQEIVR AG GE +GWAFGLGLERLAMVLF IPDIRLFWS D+RFT QF+ G+IT F P+SKYP C+KDVSFW D    F+ N+  E+VR + GD+VE V +VDEF HPKT R SKC+R+ YR M+R+LTN E+D +QE VR +M   L VELR
Sbjct:   40 PYCNVGESIAAKIGVSLHRQPNHPLHIIKTKIEGYFDNLHQNHGAPKFTVFDDLDPVVTTYDCFDSMLVPKDHVSRKVTDTYYVDQNRVLRAHTSAHEVATMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSEL-DAATPREEKVAHVKEELKKTLEGMAKELFGNVEMRWVEAYFPFTEPSLELEIYFNGDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDKRFTSQFKDGEITKFKPYSKYPECFKDVSFWHDDT--FHENNLCEVVRDIAGDMVEQVAIVDEFTHPKTQRTSKCYRITYRHMDRNLTNSEVDEIQEIVRAKMVKELGVELR 399          
The following BLAST results are available for this feature:
BLAST of EWM28680.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111103|gb|EWM28680.1|0.000e+0100.00phenylalanyl-trna synthetase [Nannochloropsis gadi... [more]
gi|695393914|ref|XP_009520740.1|1.960e-15955.95hypothetical protein PHYSODRAFT_326460 [Phytophtho... [more]
gi|570985649|gb|ETP44867.1|1.372e-15861.16phenylalanine-tRNA ligase [Phytophthora parasitica... [more]
gi|567961404|gb|ETK86946.1|1.387e-15861.16phenylalanine-tRNA ligase [Phytophthora parasitica... [more]
gi|568049808|gb|ETM46774.1|2.242e-15861.16phenylalanine-tRNA ligase [Phytophthora parasitica... [more]
gi|570327794|gb|ETO75742.1|2.793e-15860.88phenylalanine-tRNA ligase [Phytophthora parasitica... [more]
gi|568019364|gb|ETL93512.1|3.110e-15860.88phenylalanine-tRNA ligase [Phytophthora parasitica... [more]
gi|970664438|gb|KUG01340.1|3.750e-15860.88Phenylalanine--tRNA ligase [Phytophthora nicotiana... [more]
gi|566024107|gb|ETI47018.1|3.998e-15860.88phenylalanine-tRNA ligase [Phytophthora parasitica... [more]
gi|675193167|ref|XP_008905468.1|4.176e-15860.88phenylalanine-tRNA ligase [Phytophthora parasitica... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1980rna1980Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications