EWM30484.1, cds197 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|585113148|gb|EWM30484.1| (trna-specific adenosine deaminase [Nannochloropsis gaditana]) HSP 1 Score: 485.337 bits (1248), Expect = 1.886e-173 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query: 1 MIRGKALQPRSVTFLALLSLLCPILLPTHAFLHTCRLSSPHARSFAVNSISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATKVREAQREEKRFDTVT 238
MIRGKALQPRSVTFLALLSLLCPILLPTHAFLHTCRLSSPHARSFAVNSISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATKVREAQREEKRFDTVT
Sbjct: 1 MIRGKALQPRSVTFLALLSLLCPILLPTHAFLHTCRLSSPHARSFAVNSISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATKVREAQREEKRFDTVT 238
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|553195793|ref|XP_005856209.1| (trna-specific adenosine deaminase [Nannochloropsis gaditana CCMP526] >gi|422292857|gb|EKU20159.1| trna-specific adenosine deaminase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 481.485 bits (1238), Expect = 6.972e-172 Identity = 237/238 (99.58%), Postives = 237/238 (99.58%), Query Frame = 0
Query: 1 MIRGKALQPRSVTFLALLSLLCPILLPTHAFLHTCRLSSPHARSFAVNSISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATKVREAQREEKRFDTVT 238
MI GKALQPRSVTFLALLSLLCPILLPTHAFLHTCRLSSPHARSFAVNSISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATKVREAQREEKRFDTVT
Sbjct: 1 MICGKALQPRSVTFLALLSLLCPILLPTHAFLHTCRLSSPHARSFAVNSISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATKVREAQREEKRFDTVT 238
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|545712381|ref|XP_005708495.1| (tRNA-specific adenosine deaminase [Galdieria sulphuraria] >gi|452824976|gb|EME31975.1| tRNA-specific adenosine deaminase [Galdieria sulphuraria]) HSP 1 Score: 141.739 bits (356), Expect = 6.188e-39 Identity = 71/155 (45.81%), Postives = 102/155 (65.81%), Query Frame = 0
Query: 60 QDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERR 214
Q E +M +AL A+ +F EVP+GA+LV ++G+V+A GRN+VE T D + HAEL+C++AA G WR+LN TLY TLEPC MCL A+Q RV +VYGA+ LGAIES+ ++ Q HP+H + GG+ +C + +++FF+ R
Sbjct: 8 QHEYFMRIALELAKQSFYQGEVPIGAILVDAKGKVIAKGRNQVETTKDPTQHAELQCIQAATRVC-----GNWRLLNTTLYSTLEPCAMCLSALQLARVSFIVYGAKDFRLGAIESWYPLV-QVKHPYHRITHM-GGILEEECAEWIQKFFSNIR 155
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|873220519|emb|CEM35424.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 142.124 bits (357), Expect = 1.050e-38 Identity = 77/154 (50.00%), Postives = 101/154 (65.58%), Query Frame = 0
Query: 61 DEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERR 214
DE+YM LAL +A A EVP+GAVLV +G+VL+ GRN VEA DA+AHAEL+C+R A+ G WR+LNCTLY TLEPC MC+GA+Q R+ +VYGA +G S+V + + HPFH + V+GGV A + L++ FF E R
Sbjct: 24 DERYMRLALQQAAMAAERGEVPIGAVLVDGQGEVLSVGRNGVEAAHDATAHAELQCIREAS-----QILGTWRLLNCTLYTTLEPCPMCVGAMQLARIHTLVYGASDNRMGGAGSWVSLATEPKHPFHQ-MAVRGGVMATEARQLLRTFFREAR 171
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|516859478|ref|WP_018133971.1| (tRNA-specific adenosine deaminase [Acaricomes phytoseiuli]) HSP 1 Score: 140.969 bits (354), Expect = 1.337e-38 Identity = 80/166 (48.19%), Postives = 105/166 (63.25%), Query Frame = 0
Query: 49 SISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERR 214
S S S + NQ E++M ALIEA+AA +VP+GAV++S+EG VL TGRNR EA D + HAE+ LR+AA G WR+ +CTL VTLEPC MC GA+ RV RVV G+ GA S ++VL + P H +EV GGV A+C +L++ FF E+R
Sbjct: 2 SQSRSTTPAPNQSEEWMGTALIEARAALETGDVPIGAVVISAEGAVLGTGRNRREADQDPTGHAEILALRSAA-----ATTGSWRLEDCTLVVTLEPCAMCAGAIVLARVPRVVLGSWDPKAGAAGSALEVLRE-PRLNH-WVEVYGGVREAECAELLRGFFEEQR 160
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|971510958|dbj|GAQ87257.1| (tRNA arginine adenosine deaminase [Klebsormidium nitens]) HSP 1 Score: 140.584 bits (353), Expect = 3.006e-38 Identity = 80/183 (43.72%), Postives = 108/183 (59.02%), Query Frame = 0
Query: 53 SASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVL------------------EQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLES 217
SASL +QD +M LAL EA+ E+PVGAVLV + +VLA NRVE D + HAE+ C+R AA WR+L+CTLYVTLEPC MC GA+ R++R+V+GA +TLLGA S++++ +A HPFH ++V G+ +A+ LMK FF RRLE+
Sbjct: 2 SASLASDQDASFMRLALAEAERGAGEGEIPVGAVLVLGD-EVLAKAHNRVERGKDPTLHAEMICIREAA-----KKLKAWRLLDCTLYVTLEPCPMCAGAILQSRIKRLVWGAPNTLLGADGSWIRMFPVSTADPVAESTNYVLGSPRACHPFHPEIKVTRGLLSAESAALMKSFFRRRRLEN 178
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|647287646|ref|WP_025732582.1| (tRNA-specific adenosine deaminase [Carnimonas nigrificans]) HSP 1 Score: 137.117 bits (344), Expect = 2.762e-37 Identity = 79/158 (50.00%), Postives = 101/158 (63.92%), Query Frame = 0
Query: 61 DEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESE 218
DE YM AL +A+ AFAA EVPVGAV+VS++G ++ G N A D SAHAEL+ +RAAA +R+L+CTL+VTLEPC+MCLGA+ RV RVVY A G IES + Q P FH +++GGV A+ L+KRFF+ERR S
Sbjct: 4 DEFYMHRALDQARLAFAAGEVPVGAVVVSAQGAIIGAGYNAPIACHDPSAHAELQAIRAAAAQL-----NNYRLLDCTLFVTLEPCMMCLGAILQARVARVVYAAAEPKSGMIESRANLAAQ-PWHFHHP-QIQGGVLASASSQLLKRFFSERRRASN 154
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|1026777241|gb|OAE35778.1| (hypothetical protein AXG93_3524s1130 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 143.665 bits (361), Expect = 3.349e-37 Identity = 78/189 (41.27%), Postives = 114/189 (60.32%), Query Frame = 0
Query: 51 STSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKV----------------LEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATK 223
+T + +DEK+M AL+EA+ A + EVPVGAV+V + G+++A NRVEA GD +AHAE+ C+R+A+ G WR+ + ++YVT+EPC MC GA+ RV+RVV+GAR+ LLGA S+V + L+Q HPFH ++EV+ V + C +M+ FF RR + A K
Sbjct: 196 TTQCQWNDVEDEKFMLEALLEAKKAASLGEVPVGAVVVQN-GRIIARAFNRVEAEGDPTAHAEMLCIRSAS-----KTNGDWRLTDASIYVTMEPCAMCAGALLQARVKRVVWGARNKLLGADGSWVSLFPNCESHVDGEAEQSSLQQQQHPFHKSVEVRREVLSDDCSMIMRTFFRSRRKDEAPNAKK 378
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|1214420051|ref|WP_088811893.1| (tRNA adenosine(34) deaminase TadA [Polynucleobacter sp. MWH-VicM1] >gi|1210538088|emb|SNC59186.1| tRNA(adenine34) deaminase [Polynucleobacter sp. MWH-VicM1]) HSP 1 Score: 136.732 bits (343), Expect = 4.031e-37 Identity = 78/157 (49.68%), Postives = 100/157 (63.69%), Query Frame = 0
Query: 60 QDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQG--KWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERR 214
QD ++M LAL+EAQ A A EVPVGAVLVS + QV+ATG N+ + D SAHAE+ LRAA GQ +R+ N TLYVTLEPC+MC GA+ R+ RVVYGA G + S + + + P H T+ V+GGV A +C ++K FF ERR
Sbjct: 5 QDLEFMQLALVEAQKARALGEVPVGAVLVS-DNQVIATGHNQPISNNDPSAHAEVAALRAA-------GQNLSNYRLPNTTLYVTLEPCMMCCGAIMHARISRVVYGAADAKTGCVHSVLNLFDN-PQLNHHTM-VEGGVLAEECAQVLKDFFKERR 151
BLAST of EWM30484.1 vs. NCBI_GenBank
Match: gi|1120063365|ref|WP_072936405.1| (tRNA-specific adenosine deaminase [Schwartzia succinivorans] >gi|1109736988|emb|SHF29082.1| tRNA(adenine34) deaminase [Schwartzia succinivorans DSM 10502]) HSP 1 Score: 135.576 bits (340), Expect = 9.522e-37 Identity = 71/155 (45.81%), Postives = 94/155 (60.65%), Query Frame = 0
Query: 61 DEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHP-FHSTLEVKGGVHAAQCGDLMKRFFAERR 214
D KYMA+AL EA+ A A E+PVGAVLV S G+VL+ G N E+ DA+AHAE++ +R A G W + CTLYVTLEPC MC GA+ ++ RVVYG GA+ES + HP H +EV G+ +C +++ RFF +RR
Sbjct: 4 DYKYMAMALEEAELAMAQDEIPVGAVLVDSTGRVLSKGHNERESLHDATAHAEIQVIREAG-----KIMGDWHLTGCTLYVTLEPCPMCAGALIMAKISRVVYGLPDAKTGAVESIFNI---PGHPALHQNIEVTAGIMEDECHEILMRFFKKRR 150 The following BLAST results are available for this feature:
BLAST of EWM30484.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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