EWM28787.1, cds1968 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|585111210|gb|EWM28787.1| (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1 [Nannochloropsis gaditana]) HSP 1 Score: 220.32 bits (560), Expect = 1.249e-72 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
Query: 1 MTPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
MTPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG
Sbjct: 1 MTPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|1173943811|gb|OQR92618.1| (dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Achlya hypogyna]) HSP 1 Score: 124.02 bits (310), Expect = 1.712e-34 Identity = 61/117 (52.14%), Postives = 83/117 (70.94%), Query Frame = 0
Query: 4 AASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
+A A + G+ L+A+Y K + K++D FLA+++ATGVLQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+ S+ ++ E+AF +Y FC L+LF VV NF+G
Sbjct: 5 SAKAAPVNGILADLVAQYNKNTPRKMKLIDGFLAYVLATGVLQFIYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNAEAFSSAPRSAERAFADYLFCNLILFLVVMNFMG 121
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|813171484|ref|XP_012204497.1| (hypothetical protein SPRG_09683 [Saprolegnia parasitica CBS 223.65] >gi|641530739|gb|KDO24851.1| hypothetical protein SPRG_09683 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 122.479 bits (306), Expect = 7.401e-34 Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 0
Query: 2 TPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
+PA S+ ++ G+ LL++Y K + K++D FLA+++ATGVLQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+ S+ ++ E+AF +Y FC +LF VV NF+G
Sbjct: 8 SPAPSS-NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRSSERAFADYLFCNFILFLVVMNFMG 125
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|813171498|ref|XP_012204504.1| (hypothetical protein SPRG_09690 [Saprolegnia parasitica CBS 223.65] >gi|641530746|gb|KDO24858.1| hypothetical protein SPRG_09690 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 121.709 bits (304), Expect = 1.490e-33 Identity = 61/119 (51.26%), Postives = 84/119 (70.59%), Query Frame = 0
Query: 2 TPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
+PA S ++ G+ LL++Y K + K++D FLA+++ATGVLQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+ S+ ++ E+AF +Y FC +LF VV NF+G
Sbjct: 8 SPAPSG-NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRSSERAFADYLFCNFILFLVVMNFMG 125
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|669172129|ref|XP_008621413.1| (oligosaccharyl transferase complex subunit OST4 [Saprolegnia diclina VS20] >gi|669172131|ref|XP_008621414.1| oligosaccharyl transferase complex subunit OST4, variant [Saprolegnia diclina VS20] >gi|530726914|gb|EQC25156.1| oligosaccharyl transferase complex subunit OST4 [Saprolegnia diclina VS20] >gi|530726915|gb|EQC25157.1| oligosaccharyl transferase complex subunit OST4, variant [Saprolegnia diclina VS20]) HSP 1 Score: 121.709 bits (304), Expect = 1.609e-33 Identity = 61/119 (51.26%), Postives = 83/119 (69.75%), Query Frame = 0
Query: 2 TPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
+PA S ++ G+ LL++Y K + K++D FLA+++ATGVLQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+ S+ + E+AF +Y FC +LF VV NF+G
Sbjct: 8 SPAPSG-NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRTPERAFADYLFCNFILFLVVMNFMG 125
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|1173947853|gb|OQR96028.1| (acyl-CoA synthetase [Thraustotheca clavata]) HSP 1 Score: 126.331 bits (316), Expect = 1.005e-31 Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 0
Query: 9 DIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
++ G+ LL +Y K + K++D FLA+++ATG+LQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+ S+ ++ E+AF +Y FC L+LF VV NF+G
Sbjct: 474 NVNGIVSDLLTQYSKNTPRKMKLIDGFLAYVLATGILQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNAEAFDSAPRSSERAFADYLFCNLILFLVVMNFMG 585
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|1214698597|gb|OWZ11579.1| (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase [Phytophthora megakarya]) HSP 1 Score: 112.464 bits (280), Expect = 5.538e-30 Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 0
Query: 12 GVGKSL---LAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVE-----KAFGEYTFCCLLLFFVVFNFIG 111
GVG L A+Y K + K++D FLA+++ATGVLQF+YC LVGTFPFNSFL+GF VG+F L VSLR+Q++ E N + +AF +Y FC +LLF VVFNF+G
Sbjct: 9 GVGSILGDFCAKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGTFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFDDRTEQRAFADYLFCNILLFLVVFNFMG 116
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|126136090|ref|XP_001384569.1| (oligosaccharyltransferase epsilon subunit, partial [Scheffersomyces stipitis CBS 6054] >gi|126091767|gb|ABN66540.1| oligosaccharyltransferase epsilon subunit, partial [Scheffersomyces stipitis CBS 6054]) HSP 1 Score: 111.694 bits (278), Expect = 9.506e-30 Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 0
Query: 19 AEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
++Y + K++DLFL F+VA G+LQF+Y LVG FPFN+FL GF SCVG F LTVSLRLQ+ S N E+AFG++ F L+L FVV++FI
Sbjct: 11 SDYVATLTPRLKLIDLFLVFLVALGILQFVYVLLVGNFPFNAFLGGFISCVGQFVLTVSLRLQIKSATNAERAFGDFVFASLILHFVVYHFIN 103
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|635369477|emb|CCI42408.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 112.079 bits (279), Expect = 1.155e-29 Identity = 53/97 (54.64%), Postives = 72/97 (74.23%), Query Frame = 0
Query: 20 EYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSS-----EKNVEKAFGEYTFCCLLLFFVVFNFIG 111
+YRK Q +++D FLA+++ATG+LQF+YC LVG FPFNSFLSGF VG+F LTVSLR+Q+ ++ ++AF +Y FC L+LF VVFNF+G
Sbjct: 25 QYRKETPKQLQLLDGFLAYVLATGILQFVYCVLVGNFPFNSFLSGFICTVGVFVLTVSLRMQVDPTNEFVDRTEQRAFADYLFCNLILFLVVFNFMG 121
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|675181539|ref|XP_008899654.1| (hypothetical protein PPTG_07241 [Phytophthora parasitica INRA-310] >gi|675181541|ref|XP_008899655.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|566031918|gb|ETI54829.1| hypothetical protein F443_02424 [Phytophthora parasitica P1569] >gi|566031919|gb|ETI54830.1| hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567969606|gb|ETK94689.1| hypothetical protein L915_02304 [Phytophthora parasitica] >gi|567969607|gb|ETK94690.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567998007|gb|ETL48086.1| hypothetical protein L916_02264 [Phytophthora parasitica] >gi|567998008|gb|ETL48087.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568057704|gb|ETM54358.1| hypothetical protein L914_02294 [Phytophthora parasitica] >gi|568057705|gb|ETM54359.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568100322|gb|ETN15021.1| hypothetical protein PPTG_07241 [Phytophthora parasitica INRA-310] >gi|568100323|gb|ETN15022.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570335644|gb|ETO83592.1| hypothetical protein F444_02408 [Phytophthora parasitica P1976] >gi|570335645|gb|ETO83593.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570959687|gb|ETP24666.1| hypothetical protein F441_02375 [Phytophthora parasitica CJ01A1] >gi|570959688|gb|ETP24667.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570995888|gb|ETP52628.1| hypothetical protein F442_02392 [Phytophthora parasitica P10297] >gi|570995889|gb|ETP52629.1| hypothetical protein, variant [Phytophthora parasitica P10297] >gi|970642668|gb|KUF84260.1| hypothetical protein AM587_10004661 [Phytophthora nicotianae] >gi|970652746|gb|KUF91352.1| hypothetical protein AM588_10008241 [Phytophthora nicotianae]) HSP 1 Score: 111.309 bits (277), Expect = 1.745e-29 Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 0
Query: 12 GVGK---SLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNV-----EKAFGEYTFCCLLLFFVVFNFIG 111
GVG L A+Y K + K++D FLA+++ATGVLQF+YC LVG FPFNSFL+GF VG+F L VSLR+Q++ E N ++AF +Y FC ++LF VVFNF+G
Sbjct: 9 GVGSILGDLCAKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGDRTEQRAFADYLFCNIILFLVVFNFMG 116 The following BLAST results are available for this feature:
BLAST of EWM28787.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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