EWM28787.1, cds1968 (CDS) Nannochloropsis gaditana

Overview
NameEWM28787.1
Unique Namecds1968
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:603022..603247 -
Alignment locationCM002458.1:602678..602787 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28787.1
Productdolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1
Orig transcript idgnl|cribi|Naga_100002g45.4906.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:603022..603247 -
CM002458.1supercontigCM002458.1:602678..602787 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0004579dolichyl-diphosphooligosaccharide-protein glycotransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016020membrane
GO:0008250oligosaccharyltransferase complex
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR003038DAD/Ost2
Homology
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|585111210|gb|EWM28787.1| (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1 [Nannochloropsis gaditana])

HSP 1 Score: 220.32 bits (560), Expect = 1.249e-72
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
Query:    1 MTPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
            MTPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG
Sbjct:    1 MTPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|1173943811|gb|OQR92618.1| (dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Achlya hypogyna])

HSP 1 Score: 124.02 bits (310), Expect = 1.712e-34
Identity = 61/117 (52.14%), Postives = 83/117 (70.94%), Query Frame = 0
Query:    4 AASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
            +A A  + G+   L+A+Y K    + K++D FLA+++ATGVLQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+         S+ ++ E+AF +Y FC L+LF VV NF+G
Sbjct:    5 SAKAAPVNGILADLVAQYNKNTPRKMKLIDGFLAYVLATGVLQFIYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNAEAFSSAPRSAERAFADYLFCNLILFLVVMNFMG 121          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|813171484|ref|XP_012204497.1| (hypothetical protein SPRG_09683 [Saprolegnia parasitica CBS 223.65] >gi|641530739|gb|KDO24851.1| hypothetical protein SPRG_09683 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 122.479 bits (306), Expect = 7.401e-34
Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    2 TPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
            +PA S+ ++ G+   LL++Y K    + K++D FLA+++ATGVLQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+         S+ ++ E+AF +Y FC  +LF VV NF+G
Sbjct:    8 SPAPSS-NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRSSERAFADYLFCNFILFLVVMNFMG 125          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|813171498|ref|XP_012204504.1| (hypothetical protein SPRG_09690 [Saprolegnia parasitica CBS 223.65] >gi|641530746|gb|KDO24858.1| hypothetical protein SPRG_09690 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 121.709 bits (304), Expect = 1.490e-33
Identity = 61/119 (51.26%), Postives = 84/119 (70.59%), Query Frame = 0
Query:    2 TPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
            +PA S  ++ G+   LL++Y K    + K++D FLA+++ATGVLQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+         S+ ++ E+AF +Y FC  +LF VV NF+G
Sbjct:    8 SPAPSG-NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRSSERAFADYLFCNFILFLVVMNFMG 125          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|669172129|ref|XP_008621413.1| (oligosaccharyl transferase complex subunit OST4 [Saprolegnia diclina VS20] >gi|669172131|ref|XP_008621414.1| oligosaccharyl transferase complex subunit OST4, variant [Saprolegnia diclina VS20] >gi|530726914|gb|EQC25156.1| oligosaccharyl transferase complex subunit OST4 [Saprolegnia diclina VS20] >gi|530726915|gb|EQC25157.1| oligosaccharyl transferase complex subunit OST4, variant [Saprolegnia diclina VS20])

HSP 1 Score: 121.709 bits (304), Expect = 1.609e-33
Identity = 61/119 (51.26%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    2 TPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
            +PA S  ++ G+   LL++Y K    + K++D FLA+++ATGVLQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+         S+ +  E+AF +Y FC  +LF VV NF+G
Sbjct:    8 SPAPSG-NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRTPERAFADYLFCNFILFLVVMNFMG 125          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|1173947853|gb|OQR96028.1| (acyl-CoA synthetase [Thraustotheca clavata])

HSP 1 Score: 126.331 bits (316), Expect = 1.005e-31
Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 0
Query:    9 DIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQL---------SSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
            ++ G+   LL +Y K    + K++D FLA+++ATG+LQF+YC LVGTFPFNSFLSGF S VG+F LTVSLR+Q+         S+ ++ E+AF +Y FC L+LF VV NF+G
Sbjct:  474 NVNGIVSDLLTQYSKNTPRKMKLIDGFLAYVLATGILQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNAEAFDSAPRSSERAFADYLFCNLILFLVVMNFMG 585          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|1214698597|gb|OWZ11579.1| (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase [Phytophthora megakarya])

HSP 1 Score: 112.464 bits (280), Expect = 5.538e-30
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 0
Query:   12 GVGKSL---LAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVE-----KAFGEYTFCCLLLFFVVFNFIG 111
            GVG  L    A+Y K    + K++D FLA+++ATGVLQF+YC LVGTFPFNSFL+GF   VG+F L VSLR+Q++ E N +     +AF +Y FC +LLF VVFNF+G
Sbjct:    9 GVGSILGDFCAKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGTFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFDDRTEQRAFADYLFCNILLFLVVFNFMG 116          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|126136090|ref|XP_001384569.1| (oligosaccharyltransferase epsilon subunit, partial [Scheffersomyces stipitis CBS 6054] >gi|126091767|gb|ABN66540.1| oligosaccharyltransferase epsilon subunit, partial [Scheffersomyces stipitis CBS 6054])

HSP 1 Score: 111.694 bits (278), Expect = 9.506e-30
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 0
Query:   19 AEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
            ++Y      + K++DLFL F+VA G+LQF+Y  LVG FPFN+FL GF SCVG F LTVSLRLQ+ S  N E+AFG++ F  L+L FVV++FI 
Sbjct:   11 SDYVATLTPRLKLIDLFLVFLVALGILQFVYVLLVGNFPFNAFLGGFISCVGQFVLTVSLRLQIKSATNAERAFGDFVFASLILHFVVYHFIN 103          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|635369477|emb|CCI42408.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 112.079 bits (279), Expect = 1.155e-29
Identity = 53/97 (54.64%), Postives = 72/97 (74.23%), Query Frame = 0
Query:   20 EYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSS-----EKNVEKAFGEYTFCCLLLFFVVFNFIG 111
            +YRK    Q +++D FLA+++ATG+LQF+YC LVG FPFNSFLSGF   VG+F LTVSLR+Q+       ++  ++AF +Y FC L+LF VVFNF+G
Sbjct:   25 QYRKETPKQLQLLDGFLAYVLATGILQFVYCVLVGNFPFNSFLSGFICTVGVFVLTVSLRMQVDPTNEFVDRTEQRAFADYLFCNLILFLVVFNFMG 121          
BLAST of EWM28787.1 vs. NCBI_GenBank
Match: gi|675181539|ref|XP_008899654.1| (hypothetical protein PPTG_07241 [Phytophthora parasitica INRA-310] >gi|675181541|ref|XP_008899655.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|566031918|gb|ETI54829.1| hypothetical protein F443_02424 [Phytophthora parasitica P1569] >gi|566031919|gb|ETI54830.1| hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567969606|gb|ETK94689.1| hypothetical protein L915_02304 [Phytophthora parasitica] >gi|567969607|gb|ETK94690.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567998007|gb|ETL48086.1| hypothetical protein L916_02264 [Phytophthora parasitica] >gi|567998008|gb|ETL48087.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568057704|gb|ETM54358.1| hypothetical protein L914_02294 [Phytophthora parasitica] >gi|568057705|gb|ETM54359.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568100322|gb|ETN15021.1| hypothetical protein PPTG_07241 [Phytophthora parasitica INRA-310] >gi|568100323|gb|ETN15022.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570335644|gb|ETO83592.1| hypothetical protein F444_02408 [Phytophthora parasitica P1976] >gi|570335645|gb|ETO83593.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570959687|gb|ETP24666.1| hypothetical protein F441_02375 [Phytophthora parasitica CJ01A1] >gi|570959688|gb|ETP24667.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570995888|gb|ETP52628.1| hypothetical protein F442_02392 [Phytophthora parasitica P10297] >gi|570995889|gb|ETP52629.1| hypothetical protein, variant [Phytophthora parasitica P10297] >gi|970642668|gb|KUF84260.1| hypothetical protein AM587_10004661 [Phytophthora nicotianae] >gi|970652746|gb|KUF91352.1| hypothetical protein AM588_10008241 [Phytophthora nicotianae])

HSP 1 Score: 111.309 bits (277), Expect = 1.745e-29
Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 0
Query:   12 GVGK---SLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNV-----EKAFGEYTFCCLLLFFVVFNFIG 111
            GVG     L A+Y K    + K++D FLA+++ATGVLQF+YC LVG FPFNSFL+GF   VG+F L VSLR+Q++ E N      ++AF +Y FC ++LF VVFNF+G
Sbjct:    9 GVGSILGDLCAKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGDRTEQRAFADYLFCNIILFLVVFNFMG 116          
The following BLAST results are available for this feature:
BLAST of EWM28787.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111210|gb|EWM28787.1|1.249e-72100.00dolichyl-diphosphooligosaccharide--protein glycosy... [more]
gi|1173943811|gb|OQR92618.1|1.712e-3452.14dolichyl-diphosphooligosaccharide-protein glycosyl... [more]
gi|813171484|ref|XP_012204497.1|7.401e-3451.26hypothetical protein SPRG_09683 [Saprolegnia paras... [more]
gi|813171498|ref|XP_012204504.1|1.490e-3351.26hypothetical protein SPRG_09690 [Saprolegnia paras... [more]
gi|669172129|ref|XP_008621413.1|1.609e-3351.26oligosaccharyl transferase complex subunit OST4 [S... [more]
gi|1173947853|gb|OQR96028.1|1.005e-3151.79acyl-CoA synthetase [Thraustotheca clavata][more]
gi|1214698597|gb|OWZ11579.1|5.538e-3054.63Dolichyl-diphosphooligosaccharide-protein glycosyl... [more]
gi|126136090|ref|XP_001384569.1|9.506e-3055.91oligosaccharyltransferase epsilon subunit, partial... [more]
gi|635369477|emb|CCI42408.1|1.155e-2954.64unnamed protein product [Albugo candida][more]
gi|675181539|ref|XP_008899654.1|1.745e-2952.78hypothetical protein PPTG_07241 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1973rna1973Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications