EWM28740.1, cds1961 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28740.1 vs. NCBI_GenBank
Match: gi|585111163|gb|EWM28740.1| (hypothetical protein Naga_100002g53 [Nannochloropsis gaditana]) HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
Query: 1 MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKVRDLTDLEAVLFLISCF 303
MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKVRDLTDLEAVLFLISCF
Sbjct: 1 MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKVRDLTDLEAVLFLISCF 303
BLAST of EWM28740.1 vs. NCBI_GenBank
Match: gi|585111164|gb|EWM28741.1| (hypothetical protein Naga_100002g53 [Nannochloropsis gaditana]) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
Query: 1 MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAK 286
MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAK
Sbjct: 1 MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAK 286
BLAST of EWM28740.1 vs. NCBI_GenBank
Match: gi|732881975|gb|KHJ90756.1| (late embryogeneis abundant protein [Oesophagostomum dentatum]) HSP 1 Score: 68.1662 bits (165), Expect = 1.136e-9 Identity = 67/238 (28.15%), Postives = 106/238 (44.54%), Query Frame = 0
Query: 11 AVLLVLVAAA----EEGFMDKAADKIKHVV-----------------GLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKI-------GNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHE 220
+VLL+LVAA+ E+G ++ DK+ + G E AE A E YE+G+ + G D +ER KEK+ N H AK+ A QEAK A+E+ K Y+ K+ + + AK+ + + E+ +E ++ + Q Y+ K E + +G K+R+ +D V QQGK+ + E K EK++ AK+YA E
Sbjct: 7 SVLLLLVAASVYANEKGILEDIGDKVSNAAESVKNAAISGYEKVTGAGQEAAERAG--EKYEEGK---EAGSDAVERGKEKLQEGKDAAANKLHQ-AKDAASEKYQEAKDAASERYQQGKDKASQTYEHGKDAASEKYQQAKDAASDKLHQGAEKVREARDTMSEKYEQGKNAASQKYQQAKDTASEKLHQGAEKVREARDTVSEKYQQGKQTASDAYERGKDYAKEKLDQAKDYASE 238 The following BLAST results are available for this feature:
BLAST of EWM28740.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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