EWM28741.1, cds1960 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|585111164|gb|EWM28741.1| (hypothetical protein Naga_100002g53 [Nannochloropsis gaditana]) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query: 1 MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVEEL 292
MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVEEL
Sbjct: 1 MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVEEL 292
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|585111163|gb|EWM28740.1| (hypothetical protein Naga_100002g53 [Nannochloropsis gaditana]) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
Query: 1 MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAK 286
MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAK
Sbjct: 1 MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAK 286
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|732881975|gb|KHJ90756.1| (late embryogeneis abundant protein [Oesophagostomum dentatum]) HSP 1 Score: 67.3958 bits (163), Expect = 1.602e-9 Identity = 67/238 (28.15%), Postives = 106/238 (44.54%), Query Frame = 0
Query: 11 AVLLVLVAAA----EEGFMDKAADKIKHVV-----------------GLETAEEAPKYEAYEKGRGTVKHGEDVMERAKEKI-------GNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHE 220
+VLL+LVAA+ E+G ++ DK+ + G E AE A E YE+G+ + G D +ER KEK+ N H AK+ A QEAK A+E+ K Y+ K+ + + AK+ + + E+ +E ++ + Q Y+ K E + +G K+R+ +D V QQGK+ + E K EK++ AK+YA E
Sbjct: 7 SVLLLLVAASVYANEKGILEDIGDKVSNAAESVKNAAISGYEKVTGAGQEAAERAG--EKYEEGK---EAGSDAVERGKEKLQEGKDAAANKLHQ-AKDAASEKYQEAKDAASERYQQGKDKASQTYEHGKDAASEKYQQAKDAASDKLHQGAEKVREARDTMSEKYEQGKNAASQKYQQAKDTASEKLHQGAEKVREARDTVSEKYQQGKQTASDAYERGKDYAKEKLDQAKDYASE 238
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|392920160|ref|NP_001256174.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|22265914|emb|CAB05548.2| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 62.3882 bits (150), Expect = 2.360e-7 Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 0
Query: 62 DVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQG------MQGY-ETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQK-GEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVE 290
DV + AK+K ++F KE + AK AN+ +A+K YD+ KE + F SAKE ++ ESA E E A++A+ A++ G QGY E K K+ E + + D+ ++ +Q K+K + +E+ K E + AKE+A K K + A K+ D +GET E+++ A+D E + A D A E E
Sbjct: 120 DVWDSAKDKTSDVFDS-LKEHGEDASDSAKDLANDAEDAIK----DTYDSAKEKASDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASDAVESAKKQGEETSDAAKEHADHAKGKIADAWDATKDKADDVKDTAGETF--------------ENIHHSATTAVDEARENAAAAKDNASESAE 337
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|392920158|ref|NP_001256173.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|58081864|emb|CAI46598.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 62.003 bits (149), Expect = 3.205e-7 Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 0
Query: 62 DVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQG------MQGY-ETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQK-GEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVE 290
DV + AK+K ++F KE + AK AN+ +A+K YD+ KE + F SAKE ++ ESA E E A++A+ A++ G QGY E K K+ E + + D+ ++ +Q K+K + +E+ K E + AKE+A K K + A K+ D +GET E+++ A+D E + A D A E E
Sbjct: 120 DVWDSAKDKTSDVFDS-LKEHGEDASDSAKDLANDAEDAIK----DTYDSAKEKASDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASDAVESAKKQGEETSDAAKEHADHAKGKIADAWDATKDKADDVKDTAGETF--------------ENIHHSATTAVDEARENAAAAKDNASESAE 337
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|453232460|ref|NP_001263854.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|393793304|emb|CCH63939.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 61.6178 bits (148), Expect = 5.079e-7 Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 0
Query: 62 DVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQG------MQGY-ETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQK-GEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVE 290
DV + AK+K ++F KE + AK AN+ +A+K YD+ KE + F SAKE ++ ESA E E A++A+ A++ G QGY E K K+ E + + D+ ++ +Q K+K + +E+ K E + AKE+A K K + A K+ D +GET E+++ A+D E + A D A E E
Sbjct: 364 DVWDSAKDKTSDVFDS-LKEHGEDASDSAKDLANDAEDAIK----DTYDSAKEKASDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASDAVESAKKQGEETSDAAKEHADHAKGKIADAWDATKDKADDVKDTAGETF--------------ENIHHSATTAVDEARENAAAAKDNASESAE 581
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|392920146|ref|NP_001256167.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571156|emb|CCF23421.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 61.6178 bits (148), Expect = 5.134e-7 Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 0
Query: 62 DVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQG------MQGY-ETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQK-GEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVE 290
DV + AK+K ++F KE + AK AN+ +A+K YD+ KE + F SAKE ++ ESA E E A++A+ A++ G QGY E K K+ E + + D+ ++ +Q K+K + +E+ K E + AKE+A K K + A K+ D +GET E+++ A+D E + A D A E E
Sbjct: 789 DVWDSAKDKTSDVFDS-LKEHGEDASDSAKDLANDAEDAIK----DTYDSAKEKASDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASDAVESAKKQGEETSDAAKEHADHAKGKIADAWDATKDKADDVKDTAGETF--------------ENIHHSATTAVDEARENAAAAKDNASESAE 1006
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|392920138|ref|NP_001256163.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571158|emb|CCF23423.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 61.6178 bits (148), Expect = 5.627e-7 Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 0
Query: 62 DVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQG------MQGY-ETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQK-GEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVE 290
DV + AK+K ++F KE + AK AN+ +A+K YD+ KE + F SAKE ++ ESA E E A++A+ A++ G QGY E K K+ E + + D+ ++ +Q K+K + +E+ K E + AKE+A K K + A K+ D +GET E+++ A+D E + A D A E E
Sbjct: 945 DVWDSAKDKTSDVFDS-LKEHGEDASDSAKDLANDAEDAIK----DTYDSAKEKASDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASDAVESAKKQGEETSDAAKEHADHAKGKIADAWDATKDKADDVKDTAGETF--------------ENIHHSATTAVDEARENAAAAKDNASESAE 1162
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|392920132|ref|NP_001256160.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571161|emb|CCF23426.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 61.6178 bits (148), Expect = 5.793e-7 Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 0
Query: 62 DVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQG------MQGY-ETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQK-GEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVE 290
DV + AK+K ++F KE + AK AN+ +A+K YD+ KE + F SAKE ++ ESA E E A++A+ A++ G QGY E K K+ E + + D+ ++ +Q K+K + +E+ K E + AKE+A K K + A K+ D +GET E+++ A+D E + A D A E E
Sbjct: 961 DVWDSAKDKTSDVFDS-LKEHGEDASDSAKDLANDAEDAIK----DTYDSAKEKASDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASDAVESAKKQGEETSDAAKEHADHAKGKIADAWDATKDKADDVKDTAGETF--------------ENIHHSATTAVDEARENAAAAKDNASESAE 1178
BLAST of EWM28741.1 vs. NCBI_GenBank
Match: gi|392920140|ref|NP_001256164.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571159|emb|CCF23424.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 61.6178 bits (148), Expect = 5.807e-7 Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 0
Query: 62 DVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANAVKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMKEARRQG------MQGY-ETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENIEAVKGVTGEKIEHAKEYAHEVKQK-GEEGAAFKNGIKDETMGSGETLVGTATRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVE 290
DV + AK+K ++F KE + AK AN+ +A+K YD+ KE + F SAKE ++ ESA E E A++A+ A++ G QGY E K K+ E + + D+ ++ +Q K+K + +E+ K E + AKE+A K K + A K+ D +GET E+++ A+D E + A D A E E
Sbjct: 821 DVWDSAKDKTSDVFDS-LKEHGEDASDSAKDLANDAEDAIK----DTYDSAKEKASDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASDAVESAKKQGEETSDAAKEHADHAKGKIADAWDATKDKADDVKDTAGETF--------------ENIHHSATTAVDEARENAAAAKDNASESAE 1038 The following BLAST results are available for this feature:
BLAST of EWM28741.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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