EWM28799.1, cds1955 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|585111222|gb|EWM28799.1| (protein of unknown function DUF1279 [Nannochloropsis gaditana]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0 Query: 1 MFRGQGGVVGLLRFSCAAPMRSPVCGLTWIRPTATLSSHEQSRLCFVSASPQRYLAFKTHIHADFGGPHARIRRADRLDALDDFYVTRRAPNLSLGLFHISHRLAGSNTRLGSGTSSGERSSSTTCNGRDIESKGNLRSQGEGGAAPAGMGTESTRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAPS 277 MFRGQGGVVGLLRFSCAAPMRSPVCGLTWIRPTATLSSHEQSRLCFVSASPQRYLAFKTHIHADFGGPHARIRRADRLDALDDFYVTRRAPNLSLGLFHISHRLAGSNTRLGSGTSSGERSSSTTCNGRDIESKGNLRSQGEGGAAPAGMGTESTRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAPS Sbjct: 1 MFRGQGGVVGLLRFSCAAPMRSPVCGLTWIRPTATLSSHEQSRLCFVSASPQRYLAFKTHIHADFGGPHARIRRADRLDALDDFYVTRRAPNLSLGLFHISHRLAGSNTRLGSGTSSGERSSSTTCNGRDIESKGNLRSQGEGGAAPAGMGTESTRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAPS 277
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|553194051|ref|XP_005855884.1| (hypothetical protein NGA_2087520 [Nannochloropsis gaditana CCMP526] >gi|553194653|ref|XP_005856007.1| hypothetical protein NGA_2087510 [Nannochloropsis gaditana CCMP526] >gi|422293054|gb|EKU20355.1| hypothetical protein NGA_2087510 [Nannochloropsis gaditana CCMP526] >gi|422293177|gb|EKU20477.1| hypothetical protein NGA_2087520 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 274/277 (98.92%), Postives = 275/277 (99.28%), Query Frame = 0 Query: 1 MFRGQGGVVGLLRFSCAAPMRSPVCGLTWIRPTATLSSHEQSRLCFVSASPQRYLAFKTHIHADFGGPHARIRRADRLDALDDFYVTRRAPNLSLGLFHISHRLAGSNTRLGSGTSSGERSSSTTCNGRDIESKGNLRSQGEGGAAPAGMGTESTRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAPS 277 MFRGQGGVVGLLRFSCAAPMRSPVCGLTWIRPTATLSSHEQSRLCFVSASPQRYLAFKTHIHADFGGPHARIRRADRLDALDDFYVTRRAPNLSLGLFHISHRLAGSNTRLGSGTS GERSSSTTCNGRDIESKGNLRSQGEGGAAPAGMGTES+RPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTK TEPLRMILTIAVVPRIARVLGRAPS Sbjct: 1 MFRGQGGVVGLLRFSCAAPMRSPVCGLTWIRPTATLSSHEQSRLCFVSASPQRYLAFKTHIHADFGGPHARIRRADRLDALDDFYVTRRAPNLSLGLFHISHRLAGSNTRLGSGTSCGERSSSTTCNGRDIESKGNLRSQGEGGAAPAGMGTESSRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKFTEPLRMILTIAVVPRIARVLGRAPS 277
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|219130726|ref|XP_002185509.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403040|gb|EEC42996.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.1149 bits (209), Expect = 1.993e-15 Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 167 LRLMVKRYGAVAVITYLGVYVVTLSALFAAVESG-LTPFD-YGL-----DSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAP 276 ++ M ++YG V V+TY +Y+ TL LF V+SG L P +G ++ V+ ++++S ++P +++NP N AVAW+ TK TEP+R+ + + + P+IAR LG AP Sbjct: 205 VKAMFQQYGPVFVVTYGSLYLTTLGCLFMGVQSGVLDPASVFGFLGQADETKDTVQLVVDFMQHHSITQPYAHVVESNPTYANLAVAWIATKFTEPVRLAVALPITPKIARYLGYAP 321
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|635361378|emb|CCI49673.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 81.2629 bits (199), Expect = 4.564e-15 Identity = 46/134 (34.33%), Postives = 78/134 (58.21%), Query Frame = 0 Query: 153 ESTRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGL------TPFDYGLDSNWLVEKATH----LLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAP 276 ES + Q + + + + + ++YG VA+ TY +Y + L +++ ++E+GL T + +N+ V T+ L E+Y + L + + N G+F +AWV TK TEP+R+ +T+A+ PRIAR LGRAP Sbjct: 51 ESIKAQSQTH-LNRFKDLWRKYGLVAIGTYFTMYGIVLGSIYISIENGLISKNRNTRLNKDTTTNFDVVSTTNKMIALAEDYGLVKYL-DVERVNSKTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAP 182
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|470491896|ref|XP_004345946.1| (hypothetical protein ACA1_183360 [Acanthamoeba castellanii str. Neff] >gi|440800363|gb|ELR21402.1| hypothetical protein ACA1_183360 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 82.8037 bits (203), Expect = 7.470e-15 Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 0 Query: 154 STRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIAR 270 S+ E K+GK+R +K+YGAV V+TY G+Y TL++ + A SGL + D L+E HL + + E++ T P GNFA+AWV TK TEPLR +T+ + P I+R Sbjct: 156 SSAEAEAKPKLGKIRTFLKKYGAVGVVTYFGLYGATLASFYGAYSSGLL---FAGDVVGLIE-FLHLGDFFD------ESLLT-PKVGNFALAWVSTKFTEPLRFAITLGITPSISR 261
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|325181939|emb|CCA16393.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 78.9518 bits (193), Expect = 9.385e-15 Identity = 42/124 (33.87%), Postives = 70/124 (56.45%), Query Frame = 0 Query: 164 MGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNW----------LVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAPS 277 + + + + ++YG VA+ TY +Y + L ++ ++E+GL + + SN K L E+Y ++ L + + N G+F +AWV TK TEP+R+ +T+A+ PRIAR LGRAP Sbjct: 3 LNRFKDLWRKYGLVAIGTYFTMYGIVLGTIYISIENGLISKNRNVRSNKDTTTDFDVVSTTNKMIALAEDYGLAKYL-DVERVNSKTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPK 125
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|1210528229|dbj|GAX13344.1| (hypothetical protein FisN_17Hh287 [Fistulifera solaris]) HSP 1 Score: 81.2629 bits (199), Expect = 1.021e-14 Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 0 Query: 170 MVKRYGAVAVITYLGVYVVTLSALFAAVESG-LTPF--------DYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAPS 277 M+K+YG V + TYLGVYV TL+ F +E+G L P D G ++ + ++N++ ++P V ++ P NFAVAW+ K TEP+R+ + + + PR+AR++G P Sbjct: 101 MMKKYGPVFIGTYLGVYVTTLALFFGGIETGVLDPVVLFQWIGSDSGSVTSTTYDLVMEFMKNHAVTKPAVPYLEKYPAMANFAVAWITVKFTEPVRLPIALFLTPRVARMVGYRPK 217
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|1210532180|dbj|GAX09246.1| (hypothetical protein FisN_17Lh287 [Fistulifera solaris]) HSP 1 Score: 80.8777 bits (198), Expect = 1.752e-14 Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 0 Query: 170 MVKRYGAVAVITYLGVYVVTLSALFAAVESG-LTP---FDY-GLDSNWLVEKATH-----LLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAPS 277 M+K+YG V + TYL VYV TL+ LF +E+G L P F + G DS + T+ ++N++ ++P V ++ P NFAVAW+ K TEP+R+ + + + PR+AR++G P Sbjct: 105 MMKKYGPVFIGTYLSVYVTTLALLFGGIETGVLDPVVLFQWIGSDSGSVSASTTYDLVMEFMKNHAVTKPAVPYLEKYPSMANFAVAWITVKFTEPVRLPVALFLTPRVARMVGYRPK 222
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|698786266|ref|XP_009826165.1| (hypothetical protein H257_03670 [Aphanomyces astaci] >gi|574118993|gb|ETV84473.1| hypothetical protein H257_03670 [Aphanomyces astaci]) HSP 1 Score: 77.0258 bits (188), Expect = 1.850e-13 Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = 0 Query: 164 MGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGL----TPFDY-----GLDSNWLVEKATHLLENYSWSEPL---VETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVL 272 + K + + YG V V TYLGVYVVTL ++FAA+E+GL P + D ++ + KAT+ L +++ S L +P G+F +AWV TK TEP+R+ +T+ + PR+AR L Sbjct: 69 LQKFKDLWNTYGWVGVGTYLGVYVVTLGSMFAAIETGLLSTAAPSNKDDTNGSDDESFNIVKATNKLTDWTKSMGLGAHFNVPDVSPTTGSFLIAWVATKFTEPVRLAVTLMITPRLARFL 189
BLAST of EWM28799.1 vs. NCBI_GenBank
Match: gi|1072231503|gb|OEU16235.1| (hypothetical protein FRACYDRAFT_238823 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 78.5666 bits (192), Expect = 4.214e-13 Identity = 45/138 (32.61%), Postives = 68/138 (49.28%), Query Frame = 0 Query: 167 LRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGL----TPFDY---------------------GLDSNWLVEKAT------HLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLG 273 R M+++YG + + TY VYV T+ LF ++SG+ + DY N + A+ LE YSW++PL +Q NP NF +AW++TK TEP+R+ L +AV P IA+ +G Sbjct: 192 FRSMLRQYGPIFIGTYGVVYVSTVFGLFMGIQSGILDATSIMDYLSGTASSTADAGGGAGGGGVDVDPDNTIQSAASTMTYMVEFLEYYSWTKPLAPIVQENPWTANFGIAWIMTKFTEPIRLGLAVAVTPSIAKKIG 329 The following BLAST results are available for this feature:
BLAST of EWM28799.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|