EWM28752.1, cds1952 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|585111175|gb|EWM28752.1| (Protein of unknown function DUF1077, TMEM85 [Nannochloropsis gaditana]) HSP 1 Score: 367.851 bits (943), Expect = 7.091e-129 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 Query: 1 MYTDWNFCSVGASSSSLTQAVEKPLASYHEVHEGLASRQVHEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLPSTAYRAEVSSVPV 178 MYTDWNFCSVGASSSSLTQAVEKPLASYHEVHEGLASRQVHEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLPSTAYRAEVSSVPV Sbjct: 1 MYTDWNFCSVGASSSSLTQAVEKPLASYHEVHEGLASRQVHEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLPSTAYRAEVSSVPV 178
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|325184922|emb|CCA19414.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 116.701 bits (291), Expect = 8.730e-30 Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 0 Query: 33 EGLASRQVHEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP---STAYRAEVSS 175 +G+ S +V K + R+LK+K A +I P K+L FMM+M+GSS++I SIMV GM ++N+ ++L VN F+ V DG I L PKLIY NC+ + + +YKC SLGLLP+T+ D+ LP ST Y V S Sbjct: 31 KGIKSEKVTATTIAKAADSM----RELKKKRASEIGMAPFKSLLQTAFMMWMSGSSINIFSIMVTGMVVMNTIKSLFDVNNAFDTVNDGVIDLTQPKLIYCLGNCISIALAIYKCGSLGLLPTTSADWTWLLPVKLSTEYSVFVGS 172
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|1173957715|gb|OQS04193.1| (hypothetical protein THRCLA_03559 [Thraustotheca clavata]) HSP 1 Score: 114.39 bits (285), Expect = 3.947e-29 Identity = 57/144 (39.58%), Postives = 90/144 (62.50%), Query Frame = 0 Query: 36 ASRQVHEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP-STAYRAEVSSVPV 178 +++ V +++ G VT + +LK+K A D+A P K L GFMM+M+GSS++I SIM+ M+ +N +AL V+ F + DG + L KLI++A N V +G+ LYKC ++GLLP+T+ D+ LP A A ++VP+ Sbjct: 21 SNKHVSDSQNGTVTAKGADNTLELKKKRANDVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNVHGAFTGLDDGKLDLTQFKLIFIAANFVAIGVALYKCGTMGLLPTTSCDWTWLLPIKQAIEASAAAVPI 164
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|635371340|emb|CCI40495.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 112.849 bits (281), Expect = 2.743e-28 Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 0 Query: 58 QLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP---STAYRAEVSS 175 +LK+K A +I P K+L FMM+M+GSS++I SIMV GM ++N+ ++L VN F+ V DG + L PKL+Y NC+ + + +YKC SLGLLP+T+ D+ LP ST Y V S Sbjct: 52 ELKKKRASEIGMAPFKSLLQTAFMMWMSGSSINIFSIMVTGMVVMNTLKSLFDVNNAFDTVNDGRVDLTQPKLLYFLGNCISIALAVYKCGSLGLLPTTSADWTWLLPIKQSTEYSVFVGS 172
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|1173948333|gb|OQR96471.1| (hypothetical protein ACHHYP_15807 [Achlya hypogyna]) HSP 1 Score: 111.309 bits (277), Expect = 7.931e-28 Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 0 Query: 36 ASRQVHEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP-STAYRAEVSSVPV 178 +++ + +G VT + +LK+K A ++A P K L GFMM+M+GSS++I SIM+ M+ +N +AL +N F + DG + L+ KLI+VA N V +G+ LYKC ++GLLP+T+ D+ LP A A ++VP+ Sbjct: 20 SNKHTFDEPSGAVTAKGGDNTLELKKKRANEVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNINGAFAALDDGKLDLLQFKLIFVASNFVAIGVALYKCGTMGLLPTTSSDWTWLLPVKEAVEASSAAVPI 163
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|953500409|emb|CEG38118.1| (Predicted membrane protein [Plasmopara halstedii]) HSP 1 Score: 111.309 bits (277), Expect = 1.011e-27 Identity = 52/108 (48.15%), Postives = 77/108 (71.30%), Query Frame = 0 Query: 58 QLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP 165 +LK+K AM+I P K+L GFMM+M+G+S++I SIM+ GM ++N+A++L +N F V DG ISL PK IY+A + + MG+YKCS++GLLP+T+ D+ LP Sbjct: 60 ELKKKRAMEIGMAPFKSLLQTGFMMWMSGNSINIFSIMITGMIVMNTAKSLFNMNNAFASVNDGVISLTQPKAIYMAGSLIGAAMGVYKCSNMGLLPTTSADWTWLLP 167
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|698795990|ref|XP_009831024.1| (hypothetical protein H257_07261 [Aphanomyces astaci] >gi|574113694|gb|ETV79183.1| hypothetical protein H257_07261 [Aphanomyces astaci]) HSP 1 Score: 108.227 bits (269), Expect = 1.316e-26 Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 0 Query: 41 HEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP-STAYRAEVSSVPV 178 H A T N+ + LKQK A +IAQ P K L G MMYM+GSS++I SIM+ M++ N +AL VN F + DG ++L K+ +V N V +G+ LYKC ++GLLP+T+ D+ LP A S+ PV Sbjct: 29 HNAVTTTSANDTL----DLKQKRASEIAQAPFKGLFQTGLMMYMSGSSINIFSIMITAMAIFNPLKALFNVNGAFASLEDGKMNLAQSKVTFVVANLVAIGVALYKCGTMGLLPTTSADWTWLLPVKQALETSASATPV 163
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|673034284|ref|XP_008871103.1| (hypothetical protein H310_07505 [Aphanomyces invadans] >gi|574473074|gb|ETW00078.1| hypothetical protein H310_07505 [Aphanomyces invadans]) HSP 1 Score: 107.842 bits (268), Expect = 1.581e-26 Identity = 56/139 (40.29%), Postives = 81/139 (58.27%), Query Frame = 0 Query: 41 HEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP-STAYRAEVSSVPV 178 H A T N+ + LKQK A +IAQ P K L G MMYM+GSS++I SIM+ M++ N +AL VN F + DG ++L+ K+ +V N V + + LYKC ++GLLP+T+ D+ LP A S+ P+ Sbjct: 29 HNAVTTTSANDTL----DLKQKRATEIAQAPFKGLFQTGLMMYMSGSSINIFSIMITAMAIFNPLKALFNVNGAFASLEDGKLNLVQAKITFVVANLVAIAVALYKCGTMGLLPTTSADWTWLLPIKHALETSASATPI 163
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|301119955|ref|XP_002907705.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106217|gb|EEY64269.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 107.842 bits (268), Expect = 1.769e-26 Identity = 49/108 (45.37%), Postives = 76/108 (70.37%), Query Frame = 0 Query: 58 QLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP 165 +LK+K AM+I P K+L FMM+M+G+S++I SIM+ GM ++N+A++L +N F V+DG + L PK +Y+A + V MG+YKCS++GLLP+T+ D+ LP Sbjct: 50 ELKKKRAMEIGMAPFKSLLQTAFMMWMSGNSINIFSIMITGMIVMNTAKSLFNMNNAFASVSDGVVDLTQPKAVYMAGSLVGAAMGVYKCSNMGLLPTTSADWTWLLP 157
BLAST of EWM28752.1 vs. NCBI_GenBank
Match: gi|813119762|ref|XP_012196363.1| (hypothetical protein SPRG_02397 [Saprolegnia parasitica CBS 223.65] >gi|641538876|gb|KDO32697.1| hypothetical protein SPRG_02397 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 107.071 bits (266), Expect = 2.925e-26 Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = 0 Query: 36 ASRQVHEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP-STAYRAEVSSVPV 178 +++ + G V + + +LK+K A ++A P K L GFMM+M+GSS++I SIM+ M+ +N +AL +N F + DG + L+ KLI++A N V + + LYKC ++GLLP+T+ D+ LP A A ++VPV Sbjct: 22 SNKHTLDESHGAVATKGVDNTLELKKKRANEVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNINGAFAALDDGKLDLLQFKLIFIACNFVAIAVALYKCGTMGLLPTTSSDWTWLLPIKQAVEASAAAVPV 165 The following BLAST results are available for this feature:
BLAST of EWM28752.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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