EWM28719.1, cds1948 (CDS) Nannochloropsis gaditana

Overview
NameEWM28719.1
Unique Namecds1948
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:564073..565983 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28719.1
Productprotein of unknown function, DUF971
Orig transcript idgnl|cribi|Naga_100002g64.4838.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:564073..565983 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR000808Mrp_CS
IPR002744DUF59
IPR010376DUF971
IPR019591Mrp/NBP35_ATP-bd
IPR027417P-loop_NTPase
IPR015223ATPase_MipZ/NubP2/Cfd1
Homology
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|585111142|gb|EWM28719.1| (protein of unknown function, DUF971 [Nannochloropsis gaditana])

HSP 1 Score: 1304.27 bits (3374), Expect = 0.000e+0
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0
Query:    1 MTYRHYGHFRALFSIIFLGKYLSTSGFIQKHHVSIFGTSSSSNKPTSTPLYRYAPSVSQLFIASTPFHEKLPIVSADRNLAETSSVITSSSEKNIAQVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYRSFVDGYDTRSDRKASEEIGF 636
            MTYRHYGHFRALFSIIFLGKYLSTSGFIQKHHVSIFGTSSSSNKPTSTPLYRYAPSVSQLFIASTPFHEKLPIVSADRNLAETSSVITSSSEKNIAQVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYRSFVDGYDTRSDRKASEEIGF
Sbjct:    1 MTYRHYGHFRALFSIIFLGKYLSTSGFIQKHHVSIFGTSSSSNKPTSTPLYRYAPSVSQLFIASTPFHEKLPIVSADRNLAETSSVITSSSEKNIAQVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYRSFVDGYDTRSDRKASEEIGF 636          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|298707278|emb|CBJ25905.1| (HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101); ATP binding [Ectocarpus siliculosus])

HSP 1 Score: 532.717 bits (1371), Expect = 2.352e-180
Identity = 285/542 (52.58%), Postives = 360/542 (66.42%), Query Frame = 0
Query:   97 QVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGA-TGR--VSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYV-------DSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYRSFVDGYDTRSDR 628
            +V+  L  VMDPDL  D+V+LGFIK L I G   GR  V+F +ELTTPACPVK   +     +VE LPWV +A+V ++A+P+        D   TGLS V  +IAVSSCKGGVGKSTTAVNLAFALD+QGAKVGILDADIYGPSLPTMV PD E VEFV +QIRPM             GVKLMS+G+VN GAA +MRGPMV QL++Q +TLTSWGELDYLVIDMPPGTGDI LTLCQ LNITAAVIVTTPQ+LSFTDVVKG+D+FDTVNVP VAVVENMAY D  A+D          + ED+    G   +    R+ +    +DE  +R         +I  V ++    +    +FG+GH+ RLADMWG+ NT+ +P++ +V+ SGDSG P +VS+PDS  ++ +  LA  VVREVAKL++  +  RP +++ P E  + +   G                 Q +A A LRRQCRCA+CVEE +G+ LL P ++ E+I P E   +GNYA+ + W DGH SL+PY++F  GY  R+ R
Sbjct:   79 EVLAVLSAVMDPDLSMDIVSLGFIKELEISGEDEGRQVVTFDVELTTPACPVKAQFQQDCRDLVEALPWVDRAEVTMTAQPVRDV----SDTVPTGLSKVATIIAVSSCKGGVGKSTTAVNLAFALDKQGAKVGILDADIYGPSLPTMVKPDREEVEFVGNQIRPMTAH----------GVKLMSYGFVNQGAA-IMRGPMVSQLLSQFVTLTSWGELDYLVIDMPPGTGDIQLTLCQVLNITAAVIVTTPQKLSFTDVVKGIDLFDTVNVPSVAVVENMAYYD--AVDQTVFKTGLESNIEDLLTLDGDELSAAAAREGLASPPQDETALRAA-------VIAEVMKKRASTKQREYIFGKGHQMRLADMWGITNTIRMPLVADVASSGDSGIPFVVSKPDSDHSESYSQLAEAVVREVAKLKFSDND-RPMLSFQPAEGTVTIETSGGK---------------QVMAAADLRRQCRCALCVEEFSGKPLLDPASVPENIVPTEFAPIGNYAVSVKWDDGHSSLYPYKNFAMGYKPRTKR 580          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|873236372|emb|CEL99255.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 505.753 bits (1301), Expect = 1.695e-168
Identity = 278/563 (49.38%), Postives = 355/563 (63.06%), Query Frame = 0
Query:   97 QVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSA----GGDMKAT--GLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVE-----SQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVL--EDEDGIRTGKGAVVDDLITVVQRRLREDRIAR----PLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLL--------------VSEPDSSSAQIFMDLAGRVVREVAKLR-YDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYRSFVDGYDTRSD 627
            + +  L+ V+DPDLG D+VTLGF+K LTID +TG V+  +ELTTPACP+KD  +      +E LPWV   D+  +++PI    S     G   +    G S V  +IAVSSCKGGVGKSTTAVNLAFAL   GAKVGILDAD++GPSLPTMV P   +V   E      Q   +++    D      GVKLMSFG++NP  AAVMRGPMV  L+ Q +  T WGELDYLV+DMPPGTGDI LTLCQSL+ITAAVIVTTPQRL+FTDVVKG+DMFDTVNVPCVAVVENMA+     +D     + + R+  +A A     Q + D L  ++EDG   G+  +V      V R LR   + R     LFG+GHRQRL+DMWG+DN  SLP+L  +S++ DSGTP +              +   +  +   + ++A  VV+EVAKL+   R + RP+V YL   + + V   G                   I PA LRR+CRCA CVEE TGRQLL P +++EDI+P  +  VGNYA+G+ W+DGHKS++PYR+FV GY +R D
Sbjct:   90 ECLKSLKGVIDPDLGQDIVTLGFVKGLTIDESTGNVAMTVELTTPACPMKDQFRESITSALEVLPWVNGVDITFTSQPIGTRPSPLSLDGQRQQHAPGGTSRVRAIIAVSSCKGGVGKSTTAVNLAFALKHMGAKVGILDADVHGPSLPTMVRPSEPVVTIEEVPAEDGQTVQILKPIDHD------GVKLMSFGFINP-MAAVMRGPMVTNLLKQFVGYTDWGELDYLVVDMPPGTGDIQLTLCQSLDITAAVIVTTPQRLAFTDVVKGIDMFDTVNVPCVAVVENMAHLTTDDIDT----DRLARD--IAAATSMTDQQLRDQLSIQNEDGESVGREELVR---RCVDRALRSPDVRRRKRMQLFGKGHRQRLSDMWGIDNAFSLPLLPSISRASDSGTPFVDTDSDTADSDSETGIGPAEREAKDTYKNIAQSVVQEVAKLQSLSRDKRRPAVLYLSEGNELVVAWQGQQ---------------TAIPPAGLRRKCRCAACVEEGTGRQLLDPSSVSEDIRPTRLEPVGNYALGVDWSDGHKSIYPYRAFVPGYTSRRD 621          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|1210526441|dbj|GAX14769.1| (hypothetical protein FisN_25Lh037 [Fistulifera solaris])

HSP 1 Score: 458.759 bits (1179), Expect = 1.149e-151
Identity = 240/521 (46.07%), Postives = 328/521 (62.96%), Query Frame = 0
Query:   98 VVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYRSF 618
            V+++L+Q+ DPDL  D+VT GF +NL  D    ++S  LELTTPACPVKD  +    Q++  LPW+ + +V L+A+P             TGL+ V  ++AVSSCKGGVGKSTTAVNLAF+L + GA VGILD D+YGPSLPTMV PD ++V FV  QI P+ R           GV+L+SFG+++   AAVMRG MV QL+ Q L +  WG+LDYL++DMPPGTGDIPLTL Q LN+TAAVIVTTP  LSF DV KG++MFDTV VPC+AVVENMA+ ++         E M      A        D E V ++                  V + L+   +  P+FG GHR  L  M+G++    +P++++V+  GD GTP ++ +PDSS+ +++  LA  VV+EVAK++Y     R S+ Y    HV+A+   G +        E +IS    ++PA +RR CRCA CVEE+TGRQ+L P  ++E+I P+ + +VGNYA  I W+DGH+SL+P +S 
Sbjct:   68 VLSKLKQIQDPDLMVDIVTAGFCQNLKYDPINSKLSMDLELTTPACPVKDQFQRDCEQLLLELPWIQQVEVTLTAQP-----QGTSSTSLTGLAQVGAIVAVSSCKGGVGKSTTAVNLAFSLQQLGATVGILDTDLYGPSLPTMVTPDDDIVRFVGRQIAPLQR----------NGVRLLSFGHIH-DQAAVMRGAMVTQLLEQFLDVCQWGKLDYLIVDMPPGTGDIPLTLTQKLNLTAAVIVTTPTELSFQDVKKGIEMFDTVQVPCIAVVENMAHYELP--------ESMKETVAKAVQQSSYVTDAEQVTQE------------------VWKALQNTPL--PIFGAGHRSTLQQMYGIEQHFKVPLMDQVAYEGDHGTPFVLQQPDSSATRVYRSLAQAVVQEVAKVKYTHPNQRLSLEYNRDTHVVALK-QGTSP------QEEEIS---TLSPATIRRACRCAACVEELTGRQILLPSMVSENISPLRMQSVGNYAWSIDWSDGHRSLYPEKSL 534          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|224009934|ref|XP_002293925.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970597|gb|EED88934.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 449.899 bits (1156), Expect = 4.730e-150
Identity = 247/523 (47.23%), Postives = 324/523 (61.95%), Query Frame = 0
Query:   96 AQVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRT-GKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSR-LRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYR 616
            +Q++  L  + DPDL +D+V+LGF++NL ID ++  VS  LELTTPACPVKD    Q   ++  L W   ADV L+++P  A   A       G+S +  VIAVSSCKGGVGKSTTAVNLAFAL+  GAKVGI DAD+YGPSLPTMV P+ + V FV  QI P+ R            V LMSFGYVN G+A +MRGPMV QL++Q L+LT+WG LDYL++DMPPGTGDI LTL Q LNITAAVIVTTPQ LSF DV +GV+MFDTVNVPC+AVVENMAY +                                  E+ + IR  G G          +RRL E                   WG+++T S+P++ +++++GDSGTP ++  P S  A I+  LA  VV EVAK+++   +  RPSV+Y   + ++ V         DDG +++       I+PA LRR CRCA CVEE+TG+Q+L P +I+E +KP+ +   GNYA+ + W+DGH+SL+PYR
Sbjct:    2 SQILAALSVINDPDLNADIVSLGFVQNLKIDESSNIVSLDLELTTPACPVKDLFVQQCQDIINGLAWTRGADVTLTSQPTAAPSDA-----PLGMSQIGAVIAVSSCKGGVGKSTTAVNLAFALESLGAKVGIFDADVYGPSLPTMVTPEDDNVRFVGRQIAPLRR----------GDVSLMSFGYVNEGSA-IMRGPMVTQLLDQFLSLTNWGALDYLIMDMPPGTGDIQLTLSQRLNITAAVIVTTPQELSFVDVERGVEMFDTVNVPCIAVVENMAYLE---------------------------------REETEMIRIFGPGH---------KRRLSE------------------QWGIEHTYSVPLMGQIAQNGDSGTPFILDNPKSPQADIYRQLAKSVVSEVAKIKFCTGKGGRPSVSYDVEKSILRV---------DDGDIQN-----ATISPAELRRGCRCAACVEELTGKQILNPASISESVKPLNMSPTGNYALSVDWSDGHRSLYPYR 434          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|219113685|ref|XP_002186426.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583276|gb|ACI65896.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 448.358 bits (1152), Expect = 1.914e-149
Identity = 247/520 (47.50%), Postives = 324/520 (62.31%), Query Frame = 0
Query:   97 QVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYR 616
            +V++ L+ V+DPDLGSD+VTLGF++NL +DG    VSF +ELTTPACPVK+  +    Q+V+ LPW     V ++A+P   E +        G+S V  VIAVSSCKGGVGKSTTAVNLAF+L R GA VGI DAD+YGPSLPTM+ P  + V FV  Q+ P+ R           GV+LMSFGYVN G+A VMRGPMV QL++Q L++T WG LDYL++DMPPGTGDI LTL Q LNITAAVIVTTPQ LSF DVV+GV+MFDTVNVPC+AVVENMAY + +  + +           + GA  R      D L  + GI                    E   + PL                       L +++ +GD+GTP ++  PDS  A+I+ +LA  VV EVAK ++ +S +RPSV Y    H++ V+ +G  G TD+  + +       + PA LRR CRCA CVEE+TGRQ+L P ++++ I P  +   GNYA+ + W+DGH+SL+PYR
Sbjct:    1 EVLSTLKSVIDPDLGSDIVTLGFVQNLKLDGRD--VSFDVELTTPACPVKEQFQLDCQQLVQDLPWTNNIQVTMTAQPSVQETAT------LGMSQVGAVIAVSSCKGGVGKSTTAVNLAFSLQRLGATVGIFDADVYGPSLPTMITPQDDTVRFVGRQVAPLQR----------NGVRLMSFGYVNDGSA-VMRGPMVTQLLDQFLSVTHWGALDYLILDMPPGTGDIQLTLTQKLNITAAVIVTTPQELSFADVVRGVEMFDTVNVPCIAVVENMAYYESADPEKIQ----------IFGAGHR------DRLSQQWGI--------------------EHSFSIPL-----------------------LNKIAANGDNGTPFVLEFPDSPPAKIYQELASAVVSEVAKTKFAKS-MRPSVQYDAESHLLQVSQNG-VGSTDEEHVAT-------LPPAELRRACRCAACVEELTGRQILVPSSVSDKIAPRNMVPTGNYALSVDWSDGHRSLYPYR 433          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|397623949|gb|EJK67207.1| (hypothetical protein THAOC_11789, partial [Thalassiosira oceanica])

HSP 1 Score: 399.053 bits (1024), Expect = 8.058e-128
Identity = 241/530 (45.47%), Postives = 325/530 (61.32%), Query Frame = 0
Query:   53 YAPSVSQLFIASTPFHEKLPIVSADRNLAETSSVITSSSEKNIAQVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSARPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRL-REDRIARP---LFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQL 578
            +AP+V +  I       +LP+          SS  TS+S         Q   +  PD   + + +  + NL +D +   VSF LELTTPACPVK++       V+ +L W   A+V L+A+   A  S        G+S + +VIAVSSCKGGVGKSTT+VNLAFAL   GA+VGI D D+YGPSLPTMV PD + V FV  QI+P+ R            V LMSFGYVN G+A VMRGPMV QL++Q L+LT+WG LDYL++DMPPGTGDI LTL Q LNI AAVIVTTPQ LSF DV +GV+MFDTVNVPCVAVVENMAY +      V+  E +     V    + L   + D  ++   ++T    +  DL+ +VQ  + +E+R       +FG+GH++RL++ WG+++T S+P+L +++++GDSGTP ++  P+S  A+I+  LA  VV EVAK +Y  +  RP+V+Y   +H I +         DDG  E  +S    I+PA LRR CRCA CVEE+TG Q+
Sbjct:  121 FAPTVVRDRIKKPACCSRLPVTRVK------SSASTSASLDVDVPATAQATSL--PDDWQNQILVRVVTNLRVDDSF-IVSFDLELTTPACPVKEEFVKACQDVINSLEWSRGAEVTLTAQE-AAPTSPFATNVPLGMSQIGSVIAVSSCKGGVGKSTTSVNLAFALQSLGARVGIFDVDLYGPSLPTMVTPDDDDVRFVGRQIQPLKR----------NDVALMSFGYVNEGSA-VMRGPMVTQLLDQFLSLTNWGALDYLILDMPPGTGDIQLTLTQKLNIDAAVIVTTPQELSFVDVERGVEMFDTVNVPCVAVVENMAYLEAETSTEVELDETLLEEKFV----EALDGRVSDA-QNSSQVQT----LAKDLVKLVQANISKENRKGTEEIRIFGKGHKRRLSEQWGIEHTYSVPLLGKIAENGDSGTPFILQNPESPQAEIYAQLAKSVVSEVAKTKYMNTG-RPAVSYDEEKHSIVI---------DDG--EKGVS---NISPANLRRACRCASCVEELTGEQI 605          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|1072223089|gb|OEU07846.1| (P-loop containing nucleoside triphosphate hydrolase protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 382.874 bits (982), Expect = 1.805e-122
Identity = 217/521 (41.65%), Postives = 304/521 (58.35%), Query Frame = 0
Query:   97 QVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSAR-PITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPYR 616
            +V+  LR V+DPDL  D+VTLGF++N+  D +T  +SF +ELTTPA  +K+  K    ++V  LP++   DV ++A+ PI  E        + G+S V  VIAVSSCKGGVGKSTT+VNLA+AL   GA VGI DAD+YGPSLPTMV PD ++V FV  QI P+ R           GVKLMSFGY+N G+A VMRGPMV QL++Q L++T WG LDYL++DMPPGTGDI LTL Q              RL+ T  V             V   + +++ADV                 V G            +E  D +     AVV+++       ++       +FG GH++RL++ WG+++  S+P+ ++++ +GDSGTP ++  PDS  A+I+ +LA  VV EV+K +Y  S  RP + Y+   ++I           DD          + +AP  LR  CRCA CVEE+TGRQ+L+P  + E IKP+++ + GNYA+ + W+DGHKSL+PYR
Sbjct:   91 EVLQTLRAVIDPDLNEDIVTLGFVQNIAFDESTRSISFDVELTTPAHAMKETFKIDCEKLVLGLPFIDSVDVTMTAQAPINTET------DSEGMSQVGAVIAVSSCKGGVGKSTTSVNLAYALQSLGASVGIFDADVYGPSLPTMVEPDDDIVRFVGRQISPLQR----------NGVKLMSFGYINEGSA-VMRGPMVSQLLDQFLSVTQWGSLDYLILDMPPGTGDIQLTLTQ--------------RLNITAAV------------IVTTPQELSFADV-----------------VRG------------VEMFDTVNVPCVAVVENMAYYESDPIK-------IFGDGHKRRLSEQWGIEHMYSMPLTDQIATNGDSGTPFVLGHPDSPQAKIYRELATSVVSEVSKAKY--SSRRPEINYIEEFNIIQF---------DD----------EPLAPTELRGACRCAACVEELTGRQILKPSDVPESIKPLQMSSTGNYALSVNWSDGHKSLYPYR 511          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|1012175028|ref|XP_015966714.1| (fe-S cluster assembly factor HCF101, chloroplastic isoform X2 [Arachis duranensis])

HSP 1 Score: 380.178 bits (975), Expect = 2.053e-121
Identity = 237/536 (44.22%), Postives = 302/536 (56.34%), Query Frame = 0
Query:   83 TSSVITSSSEKNIAQVVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSA---RPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPY 615
            +SSV T + E +   V+  L Q++DPD G+D+VT GF+K+L ID A G VSF LELTTPACP+KD  + +A +VV  LPWV    V +SA   RP+ AE+   G      L  ++N++AVSSCKGGVGKST AVNLA+ L   GA+VGI DAD+YGPSLPTMV+P+  ++E +  + R +I    L       GVKL+SFG+   G A +MRGPMV  +INQLLT T WGELDYL+IDMPPGTGDI LTLCQ + +TAAVIVTTPQ+LSF DV KGV MF  + VPCVAVVENM + D     Y        R  G                                   VVQ+           FG  H   L DM         P+   +S SGDSG P +V++P   +++IF DL   VV++ AK+   R ++  +VTY      I V +              D      + PA +RR  R A  V+E TG Q LQ   + EDI+P EI  +GNYA+ ITW DG   + PY
Sbjct:   77 SSSVSTGTPEDD---VLKALSQIIDPDFGTDIVTCGFVKDLQIDKALGEVSFRLELTTPACPIKDMFEEKANEVVTNLPWVKNVKVTMSAQPARPLFAEQLPAG------LQTISNIVAVSSCKGGVGKSTVAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPENRLLE-MNPEKRTIIPTEYL-------GVKLVSFGFAGQGRA-IMRGPMVSGVINQLLTTTEWGELDYLIIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYY----PFGRGSGS---------------------------------QVVQQ-----------FGIPH---LFDM---------PIRPTLSASGDSGMPEVVADPQGEASKIFQDLGVCVVQQCAKI---RQQVSTAVTYDRSIKAIKVKV-------------PDSDEEFFLHPATVRRNDRSAQSVDEWTGEQKLQYTDVPEDIEPEEIRPMGNYAVSITWPDGFSQIAPY 518          
BLAST of EWM28719.1 vs. NCBI_GenBank
Match: gi|1012175024|ref|XP_015966713.1| (fe-S cluster assembly factor HCF101, chloroplastic isoform X1 [Arachis duranensis])

HSP 1 Score: 377.867 bits (969), Expect = 1.779e-120
Identity = 232/521 (44.53%), Postives = 294/521 (56.43%), Query Frame = 0
Query:   98 VVTQLRQVMDPDLGSDVVTLGFIKNLTIDGATGRVSFVLELTTPACPVKDDLKAQAMQVVETLPWVTKADVILSA---RPITAEKSAGGDMKATGLSLVNNVIAVSSCKGGVGKSTTAVNLAFALDRQGAKVGILDADIYGPSLPTMVAPDTEMVEFVESQIRPMIRQTGLDAEGQPKGVKLMSFGYVNPGAAAVMRGPMVIQLINQLLTLTSWGELDYLVIDMPPGTGDIPLTLCQSLNITAAVIVTTPQRLSFTDVVKGVDMFDTVNVPCVAVVENMAYADVSALDYVDSREDMNRNGGVAGAWQRLRQDIEDVLEDEDGIRTGKGAVVDDLITVVQRRLREDRIARPLFGQGHRQRLADMWGLDNTVSLPVLEEVSKSGDSGTPLLVSEPDSSSAQIFMDLAGRVVREVAKLRYDRSRLRPSVTYLPVEHVIAVTLHGAAGLTDDGRMESDISPPQKIAPAALRRQCRCAMCVEEMTGRQLLQPETIAEDIKPVEIGAVGNYAIGITWTDGHKSLFPY 615
            V+  L Q++DPD G+D+VT GF+K+L ID A G VSF LELTTPACP+KD  + +A +VV  LPWV    V +SA   RP+ AE+   G      L  ++N++AVSSCKGGVGKST AVNLA+ L   GA+VGI DAD+YGPSLPTMV+P+  ++E +  + R +I    L       GVKL+SFG+   G A +MRGPMV  +INQLLT T WGELDYL+IDMPPGTGDI LTLCQ + +TAAVIVTTPQ+LSF DV KGV MF  + VPCVAVVENM + D     Y        R  G                                   VVQ+           FG  H   L DM         P+   +S SGDSG P +V++P   +++IF DL   VV++ AK+   R ++  +VTY      I V +              D      + PA +RR  R A  V+E TG Q LQ   + EDI+P EI  +GNYA+ ITW DG   + PY
Sbjct:   90 VLKALSQIIDPDFGTDIVTCGFVKDLQIDKALGEVSFRLELTTPACPIKDMFEEKANEVVTNLPWVKNVKVTMSAQPARPLFAEQLPAG------LQTISNIVAVSSCKGGVGKSTVAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPENRLLE-MNPEKRTIIPTEYL-------GVKLVSFGFAGQGRA-IMRGPMVSGVINQLLTTTEWGELDYLIIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYY----PFGRGSGS---------------------------------QVVQQ-----------FGIPH---LFDM---------PIRPTLSASGDSGMPEVVADPQGEASKIFQDLGVCVVQQCAKI---RQQVSTAVTYDRSIKAIKVKV-------------PDSDEEFFLHPATVRRNDRSAQSVDEWTGEQKLQYTDVPEDIEPEEIRPMGNYAVSITWPDGFSQIAPY 519          
The following BLAST results are available for this feature:
BLAST of EWM28719.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111142|gb|EWM28719.1|0.000e+0100.00protein of unknown function, DUF971 [Nannochlorops... [more]
gi|298707278|emb|CBJ25905.1|2.352e-18052.58HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101); ATP bi... [more]
gi|873236372|emb|CEL99255.1|1.695e-16849.38unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210526441|dbj|GAX14769.1|1.149e-15146.07hypothetical protein FisN_25Lh037 [Fistulifera sol... [more]
gi|224009934|ref|XP_002293925.1|4.730e-15047.23predicted protein, partial [Thalassiosira pseudona... [more]
gi|219113685|ref|XP_002186426.1|1.914e-14947.50predicted protein, partial [Phaeodactylum tricornu... [more]
gi|397623949|gb|EJK67207.1|8.058e-12845.47hypothetical protein THAOC_11789, partial [Thalass... [more]
gi|1072223089|gb|OEU07846.1|1.805e-12241.65P-loop containing nucleoside triphosphate hydrolas... [more]
gi|1012175028|ref|XP_015966714.1|2.053e-12144.22fe-S cluster assembly factor HCF101, chloroplastic... [more]
gi|1012175024|ref|XP_015966713.1|1.779e-12044.53fe-S cluster assembly factor HCF101, chloroplastic... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1953rna1953Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications