EWM28811.1, cds1947 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|585111234|gb|EWM28811.1| (pin domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 719.153 bits (1855), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
Query: 1 MWCSRFRGYFYGLLVLISIALFSMDSKAMISEVATSTMRWNGCVAFVTAPLVNKNPLSLHLSPIGWPLETNFICSIRRTRQQVACFASRASKKRRTSGRIRKESADNERNDEGGIQRDQQDAPRVSSQINIPVRRQIAFVKQMKKIVKEEERPNTAVTKKARKKKVLGQREAIASDYASFKPSVCTTYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSELRIMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARRELLFQRDGTDWRTTKSFDDAQEYFVD 346
MWCSRFRGYFYGLLVLISIALFSMDSKAMISEVATSTMRWNGCVAFVTAPLVNKNPLSLHLSPIGWPLETNFICSIRRTRQQVACFASRASKKRRTSGRIRKESADNERNDEGGIQRDQQDAPRVSSQINIPVRRQIAFVKQMKKIVKEEERPNTAVTKKARKKKVLGQREAIASDYASFKPSVCTTYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSELRIMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARRELLFQRDGTDWRTTKSFDDAQEYFVD
Sbjct: 1 MWCSRFRGYFYGLLVLISIALFSMDSKAMISEVATSTMRWNGCVAFVTAPLVNKNPLSLHLSPIGWPLETNFICSIRRTRQQVACFASRASKKRRTSGRIRKESADNERNDEGGIQRDQQDAPRVSSQINIPVRRQIAFVKQMKKIVKEEERPNTAVTKKARKKKVLGQREAIASDYASFKPSVCTTYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSELRIMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARRELLFQRDGTDWRTTKSFDDAQEYFVD 346
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|752572511|ref|WP_041243740.1| (hypothetical protein [Gloeobacter kilaueensis]) HSP 1 Score: 88.5817 bits (218), Expect = 2.317e-17 Identity = 50/142 (35.21%), Postives = 80/142 (56.34%), Query Frame = 0
Query: 183 SVCTTYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSEL--RIMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARREL 322
+ T LLVDGYNV+ +W K+++ R + +AR AL+EQL R + V+ +D S L ++ ++ FT +ADS+IE+ + EL + G RV VAT DR Q++ +A GA +S L++E+ AR ++
Sbjct: 3 TAVQTILLVDGYNVVGSWPKLVRLRDSVSLEAARNALIEQLADFASFRGYYTVLVFDSQLVLSPLARKVETASLEICFTDYEQTADSFIEKFSYELLREGR--RVMVATSDRAQQLLILAQGAGWLSAQQLLKEVKAARHQM 142
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|553881856|gb|AGY57298.1| (hypothetical protein GKIL_1052 [Gloeobacter kilaueensis JS1]) HSP 1 Score: 88.1965 bits (217), Expect = 2.354e-17 Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = 0
Query: 187 TYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSEL--RIMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARREL 322
T LLVDGYNV+ +W K+++ R + +AR AL+EQL R + V+ +D S L ++ ++ FT +ADS+IE+ + EL + G RV VAT DR Q++ +A GA +S L++E+ AR ++
Sbjct: 3 TILLVDGYNVVGSWPKLVRLRDSVSLEAARNALIEQLADFASFRGYYTVLVFDSQLVLSPLARKVETASLEICFTDYEQTADSFIEKFSYELLREGR--RVMVATSDRAQQLLILAQGAGWLSAQQLLKEVKAARHQM 138
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|971509623|dbj|GAQ88575.1| (hypothetical protein KFL_004410030 [Klebsormidium nitens]) HSP 1 Score: 91.2781 bits (225), Expect = 2.025e-16 Identity = 89/273 (32.60%), Postives = 125/273 (45.79%), Query Frame = 0
Query: 71 NFICSIRRTRQQVACFASRASKKRRTSGRIRKESADNERNDEGGIQRDQQDAPRVSSQINIPVRRQIAFVKQMKKIVKEEERPNTAVTKKARKKKVLGQREAIASDYAS---FKPSVC-------------TTYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSELRIMEGD--VDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARRELLFQ 325
+F S RR R ++ C A + +K G K D Q PRVS+ INIPVR Q+ +VK +K+ K P R+KK +R + +S AS PS LLVDGYN+ W K+ K S + +AR L+ +L+ + KVVV +D G + EGD + V++ + D+ADS+IER A L G+ V V T D Q ++ GA S LI+EI AR+E+L Q
Sbjct: 120 SFHSSCRRRRGRITCGAKKGAKGGGDEGP--KSDTDGR----------QSTPPRVSTNINIPVRYQLRYVKALKEYQKNASGPPVRQATGYRRKK---ERPSESSGVASGDVVAPSTSLMGQGVMEELNLEPPVLLVDGYNMCGYWPKLKKHFSKGDLEAARAKLIVELQTYGACKGIKVVVVFDAQKSGLQSH-SEGDKYLKVVYSAD-DTADSWIEREAKNLHDKGN-HNVWVVTSDLAQQSMAYGVGATVWSCGLLIQEINQARKEMLKQ 374
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|499455522|ref|WP_011142986.1| (hypothetical protein [Gloeobacter violaceus] >gi|37522562|ref|NP_925939.1| hypothetical protein glr2993 [Gloeobacter violaceus PCC 7421] >gi|35213563|dbj|BAC90934.1| glr2993 [Gloeobacter violaceus PCC 7421]) HSP 1 Score: 85.5001 bits (210), Expect = 2.934e-16 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 0
Query: 187 TYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSEL-RIMEGDVDEV-FTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARREL 322
T LLVDGYNV+ W ++ + R + +AR L+EQL R ++ V+ +D S L R E EV FT +ADS+IE+ + +L + RV VAT DR QV+ +A GA+ +S+ L++E+ ARR+L
Sbjct: 3 TILLVDGYNVVGAWPRLARLRDRHSLEAARNELVEQLAGYASFRGYRAVLVFDAQLVTSPLVRASETPHLEVCFTDYEQTADSFIEQYSYQLLRENRRRRVMVATSDRAQQVLVLAQGADWLSSEQLLKEVEAARRQL 140
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|737400538|ref|WP_035381815.1| (RNA-binding protein [Fervidicella metallireducens] >gi|599128306|gb|EYE87222.1| tetracycline resistance protein [Fervidicella metallireducens AeB]) HSP 1 Score: 83.5741 bits (205), Expect = 1.396e-15 Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = 0
Query: 186 TTYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEH-TPGSELR-IMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYL 317
T YL VDGYN+IN+W K +K + AR L++ LR + K++V +D H GS ++ I +G++D VFT E+++AD YIER EL + +V VAT D Q + + G ++ + L+ EI L
Sbjct: 4 TKYLFVDGYNIINSW-KELKVLKDENLEDARDKLVDMLREFAAYKGIKIIVVFDAHMVKGSSVKHIKQGEIDVVFTKEQETADCYIERNVAELSRKNEVY---VATSDYLEQRIVLQMGGIRITPAELLNEISL 133
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|298709820|emb|CBJ31618.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.8777 bits (198), Expect = 4.179e-14 Identity = 57/189 (30.16%), Postives = 92/189 (48.68%), Query Frame = 0
Query: 143 MKKIVKEEERPNTAVTKKARKKKVLGQREAIASDYAS--FKPSVCTTYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSELR--IMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARRELLFQRD 327
M+K ++ P V K R+ K + + + S + P + L+VDGYN+I +W+K + AR+ L+E+L + R W V V +D + R + ++D VFT +SAD Y+ER +L SG V VAT D+ +Q + + +GAE S +I EI ++ E + D
Sbjct: 1 MRKSMERSNGPKKMVHNKYRRVKNTDYEDIVEPEDLSHIYMPDIAPA-LMVDGYNIIFHWSKCSIVADNGDLEGARRILVEELDTLAAMRGWTVTVVFDAYKRKGRARKYVTPNEIDVVFTSNGESADMYVERLTEQLKDSG-CPNVMVATGDKLMQSLVVGAGAEVFSPDRIIEEIEISHSEAVAYTD 187
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|1180759913|ref|WP_084242204.1| (hypothetical protein [Planomicrobium okeanokoites]) HSP 1 Score: 78.9518 bits (193), Expect = 5.823e-14 Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = 0
Query: 189 LLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEH-TPGSELRIMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSL 311
LLVDGYN+I +W ++ + + + SAR L+E++ + W+V++ +D H PG E R + DV+ +FT E ++AD IE+ AV L D +V VAT D T Q V A GA +S L
Sbjct: 4 LLVDGYNIIGDWVELRELKK-DKLASARDRLIERMAEYRGYKGWRVIIVFDAHLVPGIEARNLTSDVEVIFTKESETADERIEKLAVSLNNRRD--QVYVATSDSTEQWVIFAKGALRISAREL 124
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|1054585934|ref|WP_066354623.1| (hypothetical protein [Fervidicola ferrireducens] >gi|996041005|gb|KXG75119.1| hypothetical protein AN618_20480 [Fervidicola ferrireducens]) HSP 1 Score: 77.7962 bits (190), Expect = 1.607e-13 Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 0
Query: 188 YLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEH--TPGSELRIMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREI 315
YL +DGYN+IN W ++I+A+SV+ + +AR L++ + K+VV +D H G R + V+ VFT E ++AD+YIE R V+ GD +VKVAT D Q + M GA MS L EI
Sbjct: 8 YLFIDGYNIINAWPELIEAKSVS-LETARDKLVDIMSDYAAQTGTKIVVVFDAHHVEGGRGARYLINGVEVVFTKEGETADAYIE-RTVDSMGKGD--KVKVATSDWIEQQIVMGRGAVRMSARELRNEI 133
BLAST of EWM28811.1 vs. NCBI_GenBank
Match: gi|1009147028|ref|XP_015891190.1| (PREDICTED: uncharacterized protein YacP [Ziziphus jujuba]) HSP 1 Score: 79.337 bits (194), Expect = 2.323e-13 Identity = 67/213 (31.46%), Postives = 101/213 (47.42%), Query Frame = 0
Query: 123 PRVSSQINIPVRRQIAFVKQMKKIVKEEERPNTAVTKKARKKKVLGQREAIASDYASFKPSVCTTY------------LLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSELRIMEGD-VDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARREL 322
PR++S V++ + F+K K+ K + T RKK ++E + D ++ T Y LLVDGYNV W K+ K + + ARQ L+ +L R KVVV +D G E D VD V++GE AD++IE+ V L + G RV V T DR Q + +GA S+ +L+ EI +++E+
Sbjct: 24 PRITSN----VKQNLQFLKLWKEFQKRKSSTPKPATSYRRKK---AEKEDLPEDTEIYRDPTTTLYYTNQGLDNAVPVLLVDGYNVCGYWVKLKKHFTNGRLDVARQKLINELVTFSMLREVKVVVVFDAMMSGLPTHKEEFDGVDIVYSGE-SCADAWIEKEVVALREDG-CPRVWVVTSDRIQQHAAHGAGAFVWSSKALVSEIKESKKEV 227 The following BLAST results are available for this feature:
BLAST of EWM28811.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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