EWM28766.1, cds1942 (CDS) Nannochloropsis gaditana

Overview
NameEWM28766.1
Unique Namecds1942
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:539480..539536 -
Alignment locationCM002458.1:539201..539279 -
Alignment locationCM002458.1:539137..539147 -
Alignment locationCM002458.1:538590..539049 -
Alignment locationCM002458.1:538446..538528 -

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Properties
Property NameValue
Protein idEWM28766.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100002g71.4885.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:539480..539536 -
CM002458.1supercontigCM002458.1:539201..539279 -
CM002458.1supercontigCM002458.1:539137..539147 -
CM002458.1supercontigCM002458.1:538590..539049 -
CM002458.1supercontigCM002458.1:538446..538528 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28766.1 vs. NCBI_GenBank
Match: gi|585111189|gb|EWM28766.1| (hypothetical protein Naga_100002g71 [Nannochloropsis gaditana])

HSP 1 Score: 469.544 bits (1207), Expect = 2.003e-167
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 
Query:    1 MHHMLCTPLMIYLRLNCVMVGSDVIISHSILQGSSVHRLSYQDHDLLRNTLLTRPPPTALTAGWRRTTWRVPTRPPPTALTAGWRRTTWLVPTRPPPYGSHRWLAADDMAGPYTPPPYGSHRWLAADDMAGPYTPPPYGSHRWLAADDMAGPYAPPPYSGSAKFKVVDVVEEHDKKDVAGSSYTAKAENVFFLESRHTDKSGRHRITTTASGPKWEQHVKNYLPIENVY 229
            MHHMLCTPLMIYLRLNCVMVGSDVIISHSILQGSSVHRLSYQDHDLLRNTLLTRPPPTALTAGWRRTTWRVPTRPPPTALTAGWRRTTWLVPTRPPPYGSHRWLAADDMAGPYTPPPYGSHRWLAADDMAGPYTPPPYGSHRWLAADDMAGPYAPPPYSGSAKFKVVDVVEEHDKKDVAGSSYTAKAENVFFLESRHTDKSGRHRITTTASGPKWEQHVKNYLPIENVY
Sbjct:    1 MHHMLCTPLMIYLRLNCVMVGSDVIISHSILQGSSVHRLSYQDHDLLRNTLLTRPPPTALTAGWRRTTWRVPTRPPPTALTAGWRRTTWLVPTRPPPYGSHRWLAADDMAGPYTPPPYGSHRWLAADDMAGPYTPPPYGSHRWLAADDMAGPYAPPPYSGSAKFKVVDVVEEHDKKDVAGSSYTAKAENVFFLESRHTDKSGRHRITTTASGPKWEQHVKNYLPIENVY 229
The following BLAST results are available for this feature:
BLAST of EWM28766.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111189|gb|EWM28766.1|2.003e-167100.00hypothetical protein Naga_100002g71 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1947rna1947Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications