EWM30524.1, cds193 (CDS) Nannochloropsis gaditana

Overview
NameEWM30524.1
Unique Namecds193
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:506172..507083 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30524.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100013g24.9812.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:506172..507083 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM30524.1 vs. NCBI_GenBank
Match: gi|585113188|gb|EWM30524.1| (hypothetical protein Naga_100013g24 [Nannochloropsis gaditana])

HSP 1 Score: 621.698 bits (1602), Expect = 0.000e+0
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 
Query:    1 MASSVVPVRPPTVVRRESVTWPTDDPPPQLKSYGSFSSNWRSQASTLLPSSQSTNAGNFVHSPRTERRLQWRALLLAVSTVLLTACFLVVVILVTGRTLASPHETSPGKDGPLKTFPSLSPKDSFKAEDEQPYLLAVDTVSNVKGGATDAFPGAYLAKASSHANPSPGYPSSAPEDPNIKIPVTMGCLEAMCESWMAALGQHHGDGANLTLLDCIQRTGMSADGTRACFAMSHVTDSAERVGLYQCAVCEGCLAPQSKEEKAALCQTGSGKGKTSAKRSAPSSHASTPSASAWDRYVPKGFAP 303
            MASSVVPVRPPTVVRRESVTWPTDDPPPQLKSYGSFSSNWRSQASTLLPSSQSTNAGNFVHSPRTERRLQWRALLLAVSTVLLTACFLVVVILVTGRTLASPHETSPGKDGPLKTFPSLSPKDSFKAEDEQPYLLAVDTVSNVKGGATDAFPGAYLAKASSHANPSPGYPSSAPEDPNIKIPVTMGCLEAMCESWMAALGQHHGDGANLTLLDCIQRTGMSADGTRACFAMSHVTDSAERVGLYQCAVCEGCLAPQSKEEKAALCQTGSGKGKTSAKRSAPSSHASTPSASAWDRYVPKGFAP
Sbjct:    1 MASSVVPVRPPTVVRRESVTWPTDDPPPQLKSYGSFSSNWRSQASTLLPSSQSTNAGNFVHSPRTERRLQWRALLLAVSTVLLTACFLVVVILVTGRTLASPHETSPGKDGPLKTFPSLSPKDSFKAEDEQPYLLAVDTVSNVKGGATDAFPGAYLAKASSHANPSPGYPSSAPEDPNIKIPVTMGCLEAMCESWMAALGQHHGDGANLTLLDCIQRTGMSADGTRACFAMSHVTDSAERVGLYQCAVCEGCLAPQSKEEKAALCQTGSGKGKTSAKRSAPSSHASTPSASAWDRYVPKGFAP 303
The following BLAST results are available for this feature:
BLAST of EWM30524.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113188|gb|EWM30524.1|0.000e+0100.00hypothetical protein Naga_100013g24 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna193rna193Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications