EWM28717.1, cds1921 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|585111140|gb|EWM28717.1| (polyketide cyclase/dehydrase [Nannochloropsis gaditana]) HSP 1 Score: 746.888 bits (1927), Expect = 0.000e+0 Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0
Query: 1 MLPRTRLALISALLGIIVHPFPGEAANPKLPHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIVGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPTSGKRRRPDARASGRTGSSSLADEIAKSAAESRSNIYGGGDLWEEFVQEFSDIIDTAKYASQVKERMQKREERAKSARRKKGETEAGAGPNDSRNILRVLWMTILFYSITQLWITKAERRVVKGSGIGK 363
MLPRTRLALISALLGIIVHPFPGEAANPKLPHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIVGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPTSGKRRRPDARASGRTGSSSLADEIAKSAAESRSNIYGGGDLWEEFVQEFSDIIDTAKYASQVKERMQKREERAKSARRKKGETEAGAGPNDSRNILRVLWMTILFYSITQLWITKAERRVVKGSGIGK
Sbjct: 1 MLPRTRLALISALLGIIVHPFPGEAANPKLPHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIVGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPTSGKRRRPDARASGRTGSSSLADEIAKSAAESRSNIYGGGDLWEEFVQEFSDIIDTAKYASQVKERMQKREERAKSARRKKGETEAGAGPNDSRNILRVLWMTILFYSITQLWITKAERRVVKGSGIGK 363
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|299117339|emb|CBN75295.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 183.341 bits (464), Expect = 2.437e-51 Identity = 96/239 (40.17%), Postives = 135/239 (56.49%), Query Frame = 0
Query: 7 LALISALLGIIVHPF-PGEAANPKLP--HTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAA----GRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIVGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPTSGK 238
L L +A +G F PG A H H+G ++ Y+ +P + L L+ G V+ ++ G GGR + VQDV+APA V RILDF NYNKMVP V +C NY L +G ++T L++ G KL F H Y PS ++TWTLDY ++S L+D+ G+W V + DWSRV+YSV LRIP+W+P +V+ LN +A+ AT WVK +SE Y+ +G+
Sbjct: 19 LKLAAATMGAACMLFLPGVAQGSAAAEAHPHQGKVKPYKPGMPDIVLTKKQRTDLDGGDLVQDMLKGETDEDGGKGGRALAVQDVNAPAEYVWDRILDFGNYNKMVPKVTECKNYETETLRNGTEIIKTNLKLNVFGVKLNSFFYHTYFPSKSSMTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKADFAAGR 257
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|585111483|gb|EWM28988.1| (Polyketide cyclase/dehydrase [Nannochloropsis gaditana]) HSP 1 Score: 177.563 bits (449), Expect = 2.188e-50 Identity = 80/185 (43.24%), Postives = 122/185 (65.95%), Query Frame = 0
Query: 31 PHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNY-AKRKLMHGDVELRTRYVLSIVGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQA 214
P H G+++ ++ P + L + VE+L +G VK+Q+ + +GGRG+V+QDV AP VV GRI+DF Y +MVP V+ C NY + + G E+ TR L+++GF +EYF+ H Y P + T+ WTLDY+R+SDL+D+ GYW V+P + + WSRV+YS+D+R+ +W+P V N+L Q
Sbjct: 34 PQGHNGLVKPFKPGPPSIRLKKSEVEKLRKGEAVKQQLSSG--SGGRGLVIQDVEAPPEVVWGRIMDFPAYTRMVPRVSLCENYRVQENYLQGLKEIFTRMRLTVMGFNVEYFIHHKYFPKLNTVVWTLDYNRESDLDDSVGYWHVIP-HPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQV 215
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|224000505|ref|XP_002289925.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975133|gb|EED93462.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 179.874 bits (455), Expect = 5.661e-50 Identity = 98/255 (38.43%), Postives = 147/255 (57.65%), Query Frame = 0
Query: 1 MLPRTRLALISALLGIIVHPFPGEAANPKLPHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNY------AKRKLMHGDVELRTRYVLSIVGFKLEYFVRH-LYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPTSGKRRRPDARASG 248
M P L + ++ P+ A+N PH+H G +E ++ P++ LD A+ L+ G P + Q+Q+ G AGGRG+VVQDV AP S+V RILD+DNY+ MVP + NY + + E+ TR + KLE+FVRH LY ++LTWTLDY ++SD +D+ GYW ++P + + +R++YSV + + WVP+ VV+ ++++ALT ATAWVK SE + G RR + A G
Sbjct: 1 MTPLRSLLGCVLTIALLCTPY-ANASNFNKPHSHTGKVEPFQPGDPKIKLDSKAMSILKAGKPYQTQVQS-GSAGGRGLVVQDVDAPTSIVWERILDYDNYSNMVPKTIESKNYKIVPHKPTKANNFLEKEIYTRMKVGFPMLKLEFFVRHFLYIQHHKSLTWTLDYTKESDFDDSCGYWFILPHPNDPEEK--TRLYYSVQVGMFDWVPKFVVDFMSSKALTDATAWVKKYSEIEWAKEVAKGGSRRTNNNAGG 251
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|397613998|gb|EJK62537.1| (hypothetical protein THAOC_16847 [Thalassiosira oceanica]) HSP 1 Score: 178.333 bits (451), Expect = 8.228e-48 Identity = 95/226 (42.04%), Postives = 134/226 (59.29%), Query Frame = 0
Query: 23 GEAANPKLPHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNY------AKRKLMHGDVELRTRYVLSIVGFKLEYFVRH-LYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPTSGKRRR 241
A+N PH H+G L ++ P++ LD A L G P + Q+Q + AGGRG+VVQDV AP S+V RILD+DNY MVP A+ NY + + E+ TR + KLE+FVRH LY +LTWTLDY ++SD +D+ GYW +VP + + + +R+FYSV + + WVP+ VV+ ++++ALT ATAWVK SE YQ +G R+
Sbjct: 193 ASASNFDKPHAHKGKLVPFQPGDPKVKLDGKAKNILRSGKPYQTQVQTSDGAGGRGLVVQDVDAPTSIVWERILDYDNYANMVPKTAESKNYKIVPHKPTKANNFLEKEIYTRMKVGFPMLKLEFFVRHFLYLQHHNSLTWTLDYSKESDFDDSMGYWYIVPHPDDPDEK--TRLFYSVGVSMFDWVPKFVVDFMSSKALTDATAWVKKYSEIEYQKELAAGGGRK 416
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|551619251|ref|XP_005790214.1| (hypothetical protein EMIHUDRAFT_440256, partial [Emiliania huxleyi CCMP1516] >gi|485643815|gb|EOD37785.1| hypothetical protein EMIHUDRAFT_440256, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 151.754 bits (382), Expect = 4.138e-39 Identity = 86/238 (36.13%), Postives = 128/238 (53.78%), Query Frame = 0
Query: 25 AANPKLPHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIVGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTT--------------PTSGKRRRPDARASG 248
AA PH H G L +YE+ P + L + ERL G PV + ++ R ++VQD+ AP +VVM RI+D +Y+KMV V + Y R+ G ++T Y ++++ K+ YF+ H Y P R +T+ LDY R+SD++D+ GYW V P G R SRV+YS + ++ WVP V N+L +AL+ AT WV +S + ++ P S PD+ ASG
Sbjct: 10 AAAENEPHYHNGKLTRYEIGPPSVLLSRSDEERLSSGKPVMQAMETGIVGARRLLMVQDIAAPPNVVMDRIMDLAHYDKMVDGVTRNVEY-NREQEGGLQRIKTTYDIAVLHMKMRYFMEHEYDPEKRCMTFHLDYSRRSDIDDSVGYWYVEP----GAGRASSRVYYSCECKLRGWVPSPVYNVLTKEALSKATTWVAKESVKEWRNQQQNDGLLQFVTGPPPDSRPTLSPDSSASG 242
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|1200534937|gb|OUW47345.1| (hypothetical protein CBD47_04735 [Synechococcus sp. TMED187]) HSP 1 Score: 146.747 bits (369), Expect = 1.168e-37 Identity = 86/210 (40.95%), Postives = 113/210 (53.81%), Query Frame = 0
Query: 23 GEAANPKLPHTHRGMLEKYELKVP-RLALDMAAVE--RLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVEL-RTRYVLSIVGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSER 228
G A+P PH H+G L KYE K P L +A V+ RL G P+ Q+ + R +QDVHAPA VV +ILD NY+K V V C Y R+ G VEL +Y + F LEYF++H + +T+ LDY R+S+L DT GYW V LD W RVFYS D +IPAW+P + + L A +TAWV + +
Sbjct: 42 GRGADPNRPHPHQGTLTKYERKPPSEYGLSVAGVDATRLRSGKPLL-QLISLPNGFKRTASIQDVHAPADVVWSKILDLPNYDKYVDGVVSCEVY--RREASGGVELVFAKYKIRAAAFTLEYFMQHEFERKANAMTFQLDYTRKSELADTVGYWYVEELDD-----GWCRVFYSTDSQIPAWIPGFMKDALVNLAAKRSTAWVDAECRK 243
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|676379545|ref|XP_009033051.1| (hypothetical protein AURANDRAFT_61214 [Aureococcus anophagefferens] >gi|323456075|gb|EGB11942.1| hypothetical protein AURANDRAFT_61214 [Aureococcus anophagefferens]) HSP 1 Score: 143.28 bits (360), Expect = 4.194e-36 Identity = 85/244 (34.84%), Postives = 130/244 (53.28%), Query Frame = 0
Query: 1 MLPRTRLALISALLGIIVHPFPGEAANPKLPHTHRGMLE-KYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIV-GFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPTSGKRRRP 242
M PR +ALL + F G+ P R + K ++ P + D+A +L G + +Q++ G G V+D+ AP VV ++L F+ Y VP V +C NY K +V ++TRY + +V G +EY++RH++ P LTWTLDY++QSD++D G W VVP + +WSRV Y+ DL++ PQ V++IL +AL A W+K +SE+ Y SG+ P
Sbjct: 1 MAPRA-----AALLCGVAAVFGGDPTKPHFHGPTRTPFDPKDDIAPPLKSADLA---KLADGEII--TVQSSDATSGGGCAVEDIRAPPDVVWSQLLTFETYPDKVPKVRECANYEVTKSSDEEV-MKTRYGVKVVPGLSMEYYLRHVFHPRKNALTWTLDYEKQSDIDDCHGIWRVVPHPER---PEWSRVEYAADLKLRGGCPQFVIDILTKKALVDACTWLKVESEKQYAGEVASGRGAAP 230
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|219116186|ref|XP_002178888.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409655|gb|EEC49586.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 141.354 bits (355), Expect = 4.419e-36 Identity = 80/235 (34.04%), Postives = 124/235 (52.77%), Query Frame = 0
Query: 4 RTRLALISALLGIIVHPFPGEAANPKLPHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQ-IQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIV-GFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPTS 236
R+ LAL LL + + N PH H G+L+ ++ + L A L RG V KQ + AAG G + VQD+ AP V +ILD Y VP V+ C NY +K G ++TR VL ++ G+ E + H Y P ++ W+LDY++ SD +D AG+W V + + +RVFYS D+++ +P+ ++N + AL AT+WVK ++E+ + TP +
Sbjct: 6 RSTLALSFWLLCALAT---AKKPNRNAPHAHSGLLKAHQPGPFPIVLSNADEAELNRGNSVMKQTMPAAGEEAGTVLCVQDIDAPMPAVWNQILDLGAYKGKVPKVSACDNYICQKNHDGTFTVKTRMVLGVMPGYSYENYYNHRYLPEDSSMVWSLDYEKTSDFDDVAGHWHVA---EHPSKPSHTRVFYSCDVQMKGNLPKPIINYIGKAALKQATSWVKKEAEQNQKATPPA 234
BLAST of EWM28717.1 vs. NCBI_GenBank
Match: gi|1072224026|gb|OEU08778.1| (hypothetical protein FRACYDRAFT_271578 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 132.494 bits (332), Expect = 9.546e-34 Identity = 65/172 (37.79%), Postives = 99/172 (57.56%), Query Frame = 0
Query: 66 KQIQAAGRA-GGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIV-GFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTTPT 235
KQIQ G GG I VQDV AP V +ILD ++Y VP V++C NY +++ G ++T+ + ++ G+ F H Y P+ ++TW LDYD++SD +D +G+W L+ D +RVFY+ D+++ VP VVN ++ AL AT WVK +SE+ + P
Sbjct: 2 KQIQGTGEELGGGAICVQDVAAPKQAVWSQILDLNSYKGKVPKVSECENYFEKENEDGTCTMKTKMGVKVIPGYGYTSFYDHTYSPAKDSVTWRLDYDKKSDFDDVSGHWH---LEDHPTKPDCTRVFYACDIKLKGSVPGPVVNFVSKSALKAATGWVKKESEKNPEAQPN 170 The following BLAST results are available for this feature:
BLAST of EWM28717.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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