EWM30527.1, cds192 (CDS) Nannochloropsis gaditana

Overview
NameEWM30527.1
Unique Namecds192
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:503073..505532 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30527.1
Productdual specificity protein phosphatase 9
Orig transcript idgnl|cribi|Naga_100013g25.9815.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:503073..505532 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004725protein tyrosine phosphatase activity
GO:0016791phosphatase activity
GO:0008138protein tyrosine/serine/threonine phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016311dephosphorylation
GO:0006470protein dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR000387Tyr/Dual-sp_Pase
IPR016130Tyr_Pase_AS
IPR024950DUSP
IPR000340Dual-sp_phosphatase_cat-dom
IPR029021Prot-tyrosine_phosphatase-like
IPR020422Dual-sp_phosphatase_subgr_cat
Homology
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|585113191|gb|EWM30527.1| (dual specificity protein phosphatase 9 [Nannochloropsis gaditana])

HSP 1 Score: 1706.81 bits (4419), Expect = 0.000e+0
Identity = 819/819 (100.00%), Postives = 819/819 (100.00%), Query Frame = 0
Query:    1 MLRASNKPPIFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRRQGSTRVSTKEADKQNVSYNQSATWETYSFHSPEQERQKDQRQPHPGQSADCEQSKRQQHQPYVKEVGMRKVWRERLVMSSTKGVPRHSPYPHRIHTVFGKRERRSRASPLRGFNADNSGSPSFHFVQRSGGTVTYRSDSKEEACEEDCNIRDFEDTGRIFFSKPILPVVGKSPEVATIRDPVNLQPALMPPSSFGETQKIPHLQAFERGLHCAACFTRLFKLGNVLITESSEGEDDQELQLTEGLRSLEAVEPDEPRNEKRCLFASVQKENKQKDKEKVEQRNDFEDWKAKEKVGMTEWEEMQGVHEESGEENDVATVDSAKNRVASLDDEKCFHFSHGCNDDSRRVEDLTHACTSNQSSVPPSSPHSDVSRSTSLTMAAAATVVAASFSRRKHPKRLPSPLPDVLRAESPHPPPAPSHHRFVMECGHNATYKMSPWLYSPVSSDIPTPLHALDKAEGLTMSPISSPCVDEAPESTPISPGSFSNLTRTQVPSQVWACMRILEGSKGMGERTLAIIQADELACRRFRTCQNRWILVEVLPWMHSIVNEAEKGILFCPVMHCRAEIGRWDWSERVPIGRSANKSDGDCREATGERVIDRSAKAPSNSTTLAHKHAVKSSQQLPFIGFDSSKIVIAATT 819
            MLRASNKPPIFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRRQGSTRVSTKEADKQNVSYNQSATWETYSFHSPEQERQKDQRQPHPGQSADCEQSKRQQHQPYVKEVGMRKVWRERLVMSSTKGVPRHSPYPHRIHTVFGKRERRSRASPLRGFNADNSGSPSFHFVQRSGGTVTYRSDSKEEACEEDCNIRDFEDTGRIFFSKPILPVVGKSPEVATIRDPVNLQPALMPPSSFGETQKIPHLQAFERGLHCAACFTRLFKLGNVLITESSEGEDDQELQLTEGLRSLEAVEPDEPRNEKRCLFASVQKENKQKDKEKVEQRNDFEDWKAKEKVGMTEWEEMQGVHEESGEENDVATVDSAKNRVASLDDEKCFHFSHGCNDDSRRVEDLTHACTSNQSSVPPSSPHSDVSRSTSLTMAAAATVVAASFSRRKHPKRLPSPLPDVLRAESPHPPPAPSHHRFVMECGHNATYKMSPWLYSPVSSDIPTPLHALDKAEGLTMSPISSPCVDEAPESTPISPGSFSNLTRTQVPSQVWACMRILEGSKGMGERTLAIIQADELACRRFRTCQNRWILVEVLPWMHSIVNEAEKGILFCPVMHCRAEIGRWDWSERVPIGRSANKSDGDCREATGERVIDRSAKAPSNSTTLAHKHAVKSSQQLPFIGFDSSKIVIAATT
Sbjct:    1 MLRASNKPPIFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRRQGSTRVSTKEADKQNVSYNQSATWETYSFHSPEQERQKDQRQPHPGQSADCEQSKRQQHQPYVKEVGMRKVWRERLVMSSTKGVPRHSPYPHRIHTVFGKRERRSRASPLRGFNADNSGSPSFHFVQRSGGTVTYRSDSKEEACEEDCNIRDFEDTGRIFFSKPILPVVGKSPEVATIRDPVNLQPALMPPSSFGETQKIPHLQAFERGLHCAACFTRLFKLGNVLITESSEGEDDQELQLTEGLRSLEAVEPDEPRNEKRCLFASVQKENKQKDKEKVEQRNDFEDWKAKEKVGMTEWEEMQGVHEESGEENDVATVDSAKNRVASLDDEKCFHFSHGCNDDSRRVEDLTHACTSNQSSVPPSSPHSDVSRSTSLTMAAAATVVAASFSRRKHPKRLPSPLPDVLRAESPHPPPAPSHHRFVMECGHNATYKMSPWLYSPVSSDIPTPLHALDKAEGLTMSPISSPCVDEAPESTPISPGSFSNLTRTQVPSQVWACMRILEGSKGMGERTLAIIQADELACRRFRTCQNRWILVEVLPWMHSIVNEAEKGILFCPVMHCRAEIGRWDWSERVPIGRSANKSDGDCREATGERVIDRSAKAPSNSTTLAHKHAVKSSQQLPFIGFDSSKIVIAATT 819          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|553195763|ref|XP_005856202.1| (slingshot, partial [Nannochloropsis gaditana CCMP526] >gi|422292850|gb|EKU20152.1| slingshot, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 367.851 bits (943), Expect = 1.039e-119
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0
Query:   52 LNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRRQGSTRVSTKEADKQNVSYNQSATWETYSFHSPEQERQKDQRQPHPG 228
            LNAT VPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRRQGSTRVSTKEADKQNVSYNQSATWETYSFHSPEQERQKDQRQPHPG
Sbjct:    1 LNATGVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRRQGSTRVSTKEADKQNVSYNQSATWETYSFHSPEQERQKDQRQPHPG 177          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|673024222|ref|XP_008866072.1| (hypothetical protein H310_03825 [Aphanomyces invadans] >gi|574477638|gb|ETW04634.1| hypothetical protein H310_03825 [Aphanomyces invadans])

HSP 1 Score: 191.815 bits (486), Expect = 1.160e-48
Identity = 91/178 (51.12%), Postives = 130/178 (73.03%), Query Frame = 0
Query:    6 NKPPIF-LESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRR 182
            NKPP   L+ SLVQD+LPC+VI  +++GSVH+AFN +A+ + +ITH+LN +   + +P  FTY  + L D +  NLL+C+P A  F+E+ +++G G+LVHC+GGRSRS ++VIAYLMS L  +F+DA ++VR ARPV+QLN GFE QL+ +E    DVY AHQ +L+ ++   A LRR
Sbjct:   22 NKPPCLALQPSLVQDNLPCEVIPKLWVGSVHAAFNFEAIKERKITHVLNVSGTIATYPHEFTYLTVDLRDKDYTNLLSCIPIATVFLESGMQQG-GILVHCAGGRSRSPAIVIAYLMSALGHSFDDAISKVRIARPVVQLNSGFEDQLRCFEKAKRDVYAAHQLLLQTKIVR-ARLRR 197          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|298706792|emb|CBJ29715.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 191.815 bits (486), Expect = 2.810e-47
Identity = 87/173 (50.29%), Postives = 124/173 (71.68%), Query Frame = 0
Query:    1 MLRASNKPPIFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIR 173
            M + +N PP  L  SLVQD++P KV   ++IGS+H+AFN D++    ITH+LNA+ +P+ FP  FTYF + + D ES+N+L  + A   F+E  +E+G GVLVHC+GGRSRSA+ V+A++MS    +++ A+A+VR ARPV  +N+GFE QL+AY    CDV+ AHQ +LRIR
Sbjct:    1 MTKRANPPP--LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKG-GVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIR 170          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|698808256|ref|XP_009837157.1| (hypothetical protein H257_11820 [Aphanomyces astaci] >gi|574107772|gb|ETV73282.1| hypothetical protein H257_11820 [Aphanomyces astaci])

HSP 1 Score: 180.644 bits (457), Expect = 1.247e-44
Identity = 85/178 (47.75%), Postives = 127/178 (71.35%), Query Frame = 0
Query:    6 NKPPIF-LESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRR 182
            +KPP   L+ SLVQD+LPC+V+  +++GSVH+AFN +A+ + +I+H+LN +   + +P+ FTY  + + D +  NLL+C+P A  F+E+ ++ G GVLVHC+GGRSRS ++V+AYLMS L  +F++A  +VR ARPV  LN GFE QL+ +E    DVY AHQ +L+ ++   A LRR
Sbjct:   21 SKPPCLALQPSLVQDNLPCEVVPKLWVGSVHAAFNFEAIKERKISHVLNVSGTVATYPQEFTYLTVDIRDKDYTNLLSCVPIATVFLESGMQHG-GVLVHCAGGRSRSPAIVVAYLMSTLGTSFDEALIKVRTARPVASLNSGFEDQLRCFEKAKRDVYVAHQLLLQTKI-VRARLRR 196          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|669153380|ref|XP_008612252.1| (hypothetical protein SDRG_08160 [Saprolegnia diclina VS20] >gi|530736148|gb|EQC34390.1| hypothetical protein SDRG_08160 [Saprolegnia diclina VS20])

HSP 1 Score: 175.637 bits (444), Expect = 1.531e-43
Identity = 78/172 (45.35%), Postives = 120/172 (69.77%), Query Frame = 0
Query:    4 ASNKPP-IFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRL 174
            ++ KPP + L+ +LVQD++P +V+  +++GS+H+AFN +A+ + +ITH+LN +   + +P+ FTY  + L D E  NLL+CLP    F+E  ++ G GVLVHC+GGRSRS ++ +AY+M      + DAFA++RA RPV+ LN GFE QLQ  E    DV+RAHQ +L+ ++
Sbjct:    2 SARKPPSLALQPALVQDNIPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLTIDLRDKEYTNLLSCLPVTTVFLEAGMQNG-GVLVHCAGGRSRSPAIAMAYIMLTQGFPYADAFAKLRAVRPVVALNTGFEDQLQCLEKAQLDVFRAHQLLLQTKM 172          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|667482001|gb|AIG55576.1| (secreted protein [Thraustotheca clavata])

HSP 1 Score: 181.03 bits (458), Expect = 3.799e-43
Identity = 78/172 (45.35%), Postives = 125/172 (72.67%), Query Frame = 0
Query:    4 ASNKPP-IFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRL 174
            ++ KPP + L+ SLVQD+LP +V+  +++GS+H+AFN +A+ + +ITH+LN +   + +P+ FTY  + + D E  N+L+C+P A  F+E  ++ G GVLVHC+GGRSRS ++ IAY+MS L  +++DA A++R+ RPV+ LN GFE QLQ +E    DV++AHQ +L+ ++
Sbjct:  427 STRKPPSLALQPSLVQDNLPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLAIDVRDKEYTNILSCIPVATVFLEAGMQNG-GVLVHCAGGRSRSPAIAIAYIMSTLGFSYDDALAKLRSIRPVVSLNSGFEEQLQCFEKAKLDVFKAHQMLLQSKI 597          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|1173953133|gb|OQS00697.1| (hypothetical protein THRCLA_05896 [Thraustotheca clavata])

HSP 1 Score: 179.489 bits (454), Expect = 4.705e-43
Identity = 78/172 (45.35%), Postives = 125/172 (72.67%), Query Frame = 0
Query:    4 ASNKPP-IFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRL 174
            ++ KPP + L+ SLVQD+LP +V+  +++GS+H+AFN +A+ + +ITH+LN +   + +P+ FTY  + + D E  N+L+C+P A  F+E  ++ G GVLVHC+GGRSRS ++ IAY+MS L  +++DA A++R+ RPV+ LN GFE QLQ +E    DV++AHQ +L+ ++
Sbjct:  386 STRKPPSLALQPSLVQDNLPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLAIDVRDKEYTNILSCIPVATVFLEAGMQNG-GVLVHCAGGRSRSPAIAIAYIMSTLGFSYDDALAKLRSIRPVVSLNSGFEEQLQCFEKAKLDVFKAHQMLLQSKI 556          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|695401514|ref|XP_009522788.1| (hypothetical protein PHYSODRAFT_490868 [Phytophthora sojae] >gi|348680255|gb|EGZ20071.1| hypothetical protein PHYSODRAFT_490868 [Phytophthora sojae])

HSP 1 Score: 174.096 bits (440), Expect = 1.672e-42
Identity = 84/194 (43.30%), Postives = 130/194 (67.01%), Query Frame = 0
Query:    8 PPIFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRRQG--STRVSTKEADKQNVS 199
            P + L++S+VQD++P +V  G+++GS+H+AFN +AL   +I+H+LN     + FPE FTY +LS+ D E A+LL+CLP A  FI+  L++G GVLVHC+GGRSRS ++ +A+LM K ++ +    A V+A RPV+ LN GF+ QL+  E  + DV+ A+Q +L+ RL   A+  + G  ++ V+ K    Q  S
Sbjct:    7 PGLRLQTSIVQDNIPVEVAAGLFVGSIHAAFNVEALKANKISHVLNLAGSYATFPEDFTYLSLSIRDKEYASLLSCLPIAAVFIDAGLKQG-GVLVHCAGGRSRSPAVAMAFLMMKQQMLYSTISAHVKALRPVVSLNVGFDAQLKCLETASGDVFIANQHLLKARLARLAQQHQDGELNSEVARKRRQSQQAS 199          
BLAST of EWM30527.1 vs. NCBI_GenBank
Match: gi|570992375|gb|ETP49887.1| (hypothetical protein F442_04665 [Phytophthora parasitica P10297])

HSP 1 Score: 169.859 bits (429), Expect = 2.773e-41
Identity = 78/177 (44.07%), Postives = 119/177 (67.23%), Query Frame = 0
Query:    8 PPIFLESSLVQDDLPCKVIHGIYIGSVHSAFNSDALGKCEITHILNATSVPSVFPELFTYFNLSLHDNESANLLACLPAAFTFIETALEEGTGVLVHCSGGRSRSASLVIAYLMSKLKLTFEDAFARVRAARPVIQLNQGFEMQLQAYEDQACDVYRAHQQVLRIRLHSFAELRRQG 184
            P + L++++VQD++P +V  G+++GS+H+AFN D L   +++HILN     + FPE FTY +LS+ D E A+LL+CLP A  FI+  L+ G GVL+HC+GGRSRS ++ +A+LM K ++++ D  A V+  RPV+ LN GFE QL+  E    +V+ A+Q +L  RL   A+    G
Sbjct:    7 PGLRLQTAIVQDNVPVEVATGLFVGSIHAAFNVDTLKSYKVSHILNLAGSYATFPEDFTYLSLSIRDKEYASLLSCLPIAAVFIDAGLKNG-GVLIHCAGGRSRSPAVAMAFLMMKQQVSYLDISAHVKTLRPVVSLNAGFEAQLKCLETAHGNVFVANQHLLTARLTRLAQQHENG 182          
The following BLAST results are available for this feature:
BLAST of EWM30527.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113191|gb|EWM30527.1|0.000e+0100.00dual specificity protein phosphatase 9 [Nannochlor... [more]
gi|553195763|ref|XP_005856202.1|1.039e-11999.44slingshot, partial [Nannochloropsis gaditana CCMP5... [more]
gi|673024222|ref|XP_008866072.1|1.160e-4851.12hypothetical protein H310_03825 [Aphanomyces invad... [more]
gi|298706792|emb|CBJ29715.1|2.810e-4750.29conserved unknown protein [Ectocarpus siliculosus][more]
gi|698808256|ref|XP_009837157.1|1.247e-4447.75hypothetical protein H257_11820 [Aphanomyces astac... [more]
gi|669153380|ref|XP_008612252.1|1.531e-4345.35hypothetical protein SDRG_08160 [Saprolegnia dicli... [more]
gi|667482001|gb|AIG55576.1|3.799e-4345.35secreted protein [Thraustotheca clavata][more]
gi|1173953133|gb|OQS00697.1|4.705e-4345.35hypothetical protein THRCLA_05896 [Thraustotheca c... [more]
gi|695401514|ref|XP_009522788.1|1.672e-4243.30hypothetical protein PHYSODRAFT_490868 [Phytophtho... [more]
gi|570992375|gb|ETP49887.1|2.773e-4144.07hypothetical protein F442_04665 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna192rna192Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications