EWM28688.1, cds1910 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|585111111|gb|EWM28688.1| (uncharacterized protein Naga_100002g105 [Nannochloropsis gaditana]) HSP 1 Score: 686.411 bits (1770), Expect = 0.000e+0 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0
Query: 1 MAVWAWPDVLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLGGRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGLPAGAGGGDGGLGGRGGDNRAGGPVHVYQGSPNKTTDLIGHSSAPEV 342
MAVWAWPDVLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLGGRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGLPAGAGGGDGGLGGRGGDNRAGGPVHVYQGSPNKTTDLIGHSSAPEV
Sbjct: 1 MAVWAWPDVLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLGGRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGLPAGAGGGDGGLGGRGGDNRAGGPVHVYQGSPNKTTDLIGHSSAPEV 342
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|553195904|ref|XP_005856228.1| (hypothetical protein NGA_2030900, partial [Nannochloropsis gaditana CCMP526] >gi|422292830|gb|EKU20132.1| hypothetical protein NGA_2030900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 591.652 bits (1524), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
Query: 1 MAVWAWPDVLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLGGRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKG 295
MAVWAWPDVLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLGGRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKG
Sbjct: 3 MAVWAWPDVLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLGGRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKG 297
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|695429196|ref|XP_009530131.1| (hypothetical protein PHYSODRAFT_509084 [Phytophthora sojae] >gi|348676564|gb|EGZ16382.1| hypothetical protein PHYSODRAFT_509084 [Phytophthora sojae]) HSP 1 Score: 252.292 bits (643), Expect = 1.017e-78 Identity = 132/291 (45.36%), Postives = 186/291 (63.92%), Query Frame = 0
Query: 9 VLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLG---GRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGL 296
+L + VT +Q F VAY QFDK+TD++GA NF++L LS L +R T + W RLGS+LLLRV++RG D RFDEMRA+ + F F+VFQ WVFLV++P++L+NS+ + VD RD G ++ +G VE AD SK AF+E + + ++ +G W +SRHPNY+GEI W+G+ + +S F Y + +SP+FTFL+L+FLSG PLAEERY+ER G +P YL Y+ TSPL+PLPP++YR LP +KR+ LEL ++ + L
Sbjct: 11 MLLICVGVTVLMQCSFFAVAYTCQFDKVTDLAGALNFIVLAVLSLVLQDVYDTRAIVATCMQVAWALRLGSFLLLRVLKRGKDERFDEMRANCLAFLGFWVFQILWVFLVSLPVVLANSSGEQVDGSFGEARDVVGIVVWAVGMAVEYAADASKSAFNEDPK-----NKGKLLRSGVWKYSRHPNYFGEILCWVGVTVLASANFGGDGGETWFYYVSCLSPVFTFLVLMFLSGVPLAEERYDERFGLDPDYLEYKRSTSPLVPLPPVLYRALPEPVKRWCFLELKLYSRKL 296
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|301096492|ref|XP_002897343.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107227|gb|EEY65279.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 245.743 bits (626), Expect = 3.197e-76 Identity = 125/284 (44.01%), Postives = 178/284 (62.68%), Query Frame = 0
Query: 16 VTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLG---GRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGL 296
VT +Q F +AY QFDK+TD++GA NF++L LS L +R T L VW RLGS+LL+RV++RG D RFDEMRA+ + F F++FQ WVF+V++P++L+NS V+ D G L+ +G ++EV AD SK AFH+ + + ++ +G W +SRHPNY+GEI W+G+ + +S F + Y + ISP+FTFL+L+FLSG PLAE+RY+ER G +P Y+ Y+ TSPLL LPP YR L +KR+ EL + + L
Sbjct: 18 VTVIMQCSFFAIAYTCQFDKVTDLAGALNFIVLAVLSLALQDAYDTRAIVVTCLQVVWALRLGSFLLIRVLKRGKDERFDEMRANCMAFFGFWIFQILWVFMVSLPVVLANSCGDQVNGSFGKAPDIVGCVLWAIGIVIEVAADASKSAFHDDPK-----NKGKLLQSGVWKYSRHPNYFGEILCWVGVTIVASANFGSNGGKTWFYYVSCISPVFTFLVLMFLSGVPLAEDRYDERFGLDPDYIEYKRATSPLLMLPPAFYRSLSDAIKRWCFFELERYSRKL 296
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|971520483|dbj|GAQ77797.1| (hypothetical protein KFL_000030740 [Klebsormidium nitens]) HSP 1 Score: 242.276 bits (617), Expect = 5.126e-75 Identity = 124/289 (42.91%), Postives = 186/289 (64.36%), Query Frame = 0
Query: 8 DVLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLGGRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGL 296
+ L ++A+VT A Q+ F++A+ F+FDK+TD +G +NFV+L L++ LG ++RQ T+ + VWG RLG +LL+R+++ G D RFDE R +F +F +F+VFQA WVF V++P+ + N+ ++ LG DY GW ++ +GFL EV+ADQ K F + R A+ G W +SRHPNY+GE+ +W G+F++S+R L AAV+ PI +IL+FLSG PL E ++ HG +P Y Y+ +TSPL+PLPP +Y+ LP W K L EL ++ L
Sbjct: 8 NFLAITAIVTVAYQVTFFIIAWSFKFDKVTDFAGGTNFVVLAILTFFLGATWHARQIVLTLFVIVWGVRLGGFLLMRILQWGADTRFDETRENFWKFAAFWVFQAIWVFTVSLPLTIVNATLRNPSLGAADYVGWVMWGVGFLFEVFADQQKLNFKKDR-----ANKGRWCDVGVWGYSRHPNYFGELMMWWGIFVSSTRV------LHKGQWAAVLGPITITIILLFLSGIPLLEASADKNHGGKPEYALYKRRTSPLIPLPPALYKRLPGWAKLVFLFELPLYNSKL 285
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|675194469|ref|XP_008906119.1| (hypothetical protein PPTG_12174 [Phytophthora parasitica INRA-310] >gi|566023472|gb|ETI46383.1| hypothetical protein F443_09219 [Phytophthora parasitica P1569] >gi|568018692|gb|ETL92860.1| hypothetical protein L917_08889 [Phytophthora parasitica] >gi|568049152|gb|ETM46161.1| hypothetical protein L914_08909 [Phytophthora parasitica] >gi|568093580|gb|ETN08371.1| hypothetical protein PPTG_12174 [Phytophthora parasitica INRA-310] >gi|570327116|gb|ETO75064.1| hypothetical protein F444_09298 [Phytophthora parasitica P1976]) HSP 1 Score: 242.662 bits (618), Expect = 7.910e-75 Identity = 125/284 (44.01%), Postives = 176/284 (61.97%), Query Frame = 0
Query: 16 VTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLG---GRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGL 296
VT +Q F VAY QFDK+TD++GA NF++L LS L +R T L W RLGS+LL+RV++RG D RFDEMRA+ + F F++FQ WVFLV++P++L+NS +D RD G ++ +G LVE AD SK AF++ + ++ + W +SRHPNY+GEI W+G+ + +S F + Y + ISP+FTFL+L+FLSG PLAE+RY+ER G +P Y+ Y+ TSPL+ LPP IYR +P +KR EL + + L
Sbjct: 18 VTVIMQCSFFAVAYTCQFDKVTDLAGALNFIVLAVLSLVLQDVYDTRAIVVTCLQVAWALRLGSFLLIRVLKRGKDERFDEMRANCLAFFGFWIFQILWVFLVSIPVILANSCGDQIDGNFGEARDIVGIVIWAIGILVEYAADASKSAFNDDPN-----NKGKLLRSSVWKYSRHPNYFGEILCWVGVTIVASANFGSNGGETWFYYVSCISPVFTFLVLMFLSGVPLAEDRYDERFGLDPDYIEYKRSTSPLIMLPPAIYRSIPDPIKRCCFFELERYSRKL 296
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|567960769|gb|ETK86318.1| (hypothetical protein L915_09042 [Phytophthora parasitica] >gi|567989484|gb|ETL39741.1| hypothetical protein L916_08956 [Phytophthora parasitica] >gi|570950935|gb|ETP16192.1| hypothetical protein F441_09176 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 242.662 bits (618), Expect = 8.171e-75 Identity = 126/291 (43.30%), Postives = 179/291 (61.51%), Query Frame = 0
Query: 9 VLWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLG---GRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGL 296
+L + VT +Q F VAY QFDK+TD++GA NF++L LS L +R T L W RLGS+LL+RV++RG D RFDEMRA+ + F F++FQ WVFLV++P++L+NS +D RD G ++ +G LVE AD SK AF++ + ++ + W +SRHPNY+GEI W+G+ + +S F + Y + ISP+FTFL+L+FLSG PLAE+RY+ER G +P Y+ Y+ TSPL+ LPP IYR +P +KR EL + + L
Sbjct: 11 MLLICFSVTVIMQCSFFAVAYTCQFDKVTDLAGALNFIVLAVLSLVLQDVYDTRAIVVTCLQVAWALRLGSFLLIRVLKRGKDERFDEMRANCLAFFGFWIFQILWVFLVSIPVILANSCGDQIDGNFGEARDIVGIVIWAIGILVEYAADASKSAFNDDPN-----NKGKLLRSSVWKYSRHPNYFGEILCWVGVTIVASANFGSNGGETWFYYVSCISPVFTFLVLMFLSGVPLAEDRYDERFGLDPDYIEYKRSTSPLIMLPPAIYRSIPDPIKRCCFFELERYSRKL 296
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|570984732|gb|ETP44243.1| (hypothetical protein F442_09143 [Phytophthora parasitica P10297]) HSP 1 Score: 242.276 bits (617), Expect = 1.118e-74 Identity = 125/284 (44.01%), Postives = 176/284 (61.97%), Query Frame = 0
Query: 16 VTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLG---GRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGL 296
VT +Q F VAY QFDK+TD++GA NF++L LS L +R T L W RLGS+LL+RV++RG D RFDEMRA+ + F F++FQ WVFLV++P++L+NS +D RD G ++ +G LVE AD SK AF++ + ++ + W +SRHPNY+GEI W+G+ + +S F + Y + ISP+FTFL+L+FLSG PLAE+RY+ER G +P Y+ Y+ TSPL+ LPP IYR +P +KR EL + + L
Sbjct: 18 VTVIMQCSFFAVAYTCQFDKVTDLAGALNFIVLAVLSLVLQDVYDTRAIVVTCLQVAWALRLGSFLLIRVLKRGKDERFDEMRANCLAFFGFWIFQILWVFLVSIPVILANSCGDQIDGNFGEARDIVGIVIWAIGILVEYAADASKSAFNDDPN-----NKGKLLRSSVWKYSRHPNYFGEILCWVGVTIVASANFGSNGGEMWFYYVSCISPVFTFLVLMFLSGVPLAEDRYDERFGLDPDYIEYKRSTSPLIMLPPAIYRSIPDPIKRCCFFELERYSRKL 296
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|970642395|gb|KUF84089.1| (hypothetical protein AM587_10013498 [Phytophthora nicotianae]) HSP 1 Score: 242.276 bits (617), Expect = 1.155e-74 Identity = 125/284 (44.01%), Postives = 176/284 (61.97%), Query Frame = 0
Query: 16 VTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLG---GRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGL 296
VT +Q F VAY QFDK+TD++GA NF++L LS L +R T L W RLGS+LL+RV++RG D RFDEMRA+ + F F++FQ WVFLV++P++L+NS +D RD G ++ +G LVE AD SK AF++ + ++ + W +SRHPNY+GEI W+G+ + +S F + Y + ISP+FTFL+L+FLSG PLAE+RY+ER G +P Y+ Y+ TSPL+ LPP IYR +P +KR EL + + L
Sbjct: 18 VTVIMQCSFFAVAYTCQFDKVTDLAGALNFIVLAVLSLVLQXVYDTRAIVVTCLQVAWALRLGSFLLIRVLKRGKDERFDEMRANCLAFFGFWIFQILWVFLVSIPVILANSCGDQIDGNFGEARDIVGIVIWAIGILVEYAADASKSAFNDDPN-----NKGKLLRSSVWKYSRHPNYFGEILCWVGVTIVASANFGSNGGETWFYYVSCISPVFTFLVLMFLSGVPLAEDRYDERFGLDPDYIEYKRSTSPLIMLPPAIYRSIPDPIKRCCFFELERYSRKL 296
BLAST of EWM28688.1 vs. NCBI_GenBank
Match: gi|857970336|emb|CEP03359.1| (hypothetical protein PBRA_003119 [Plasmodiophora brassicae]) HSP 1 Score: 236.498 bits (602), Expect = 9.634e-73 Identity = 119/287 (41.46%), Postives = 177/287 (61.67%), Query Frame = 0
Query: 10 LWLSALVTAALQLLTFLVAYLFQFDKLTDISGASNFVLLGWLSYGLGGHSYSRQTTNTVLLTVWGARLGSYLLLRVVRRGHDARFDEMRASFVRFGSFFVFQAFWVFLVTMPILLSNSAPQDVDLGGRDYAGWTLFTLGFLVEVWADQSKDAFHEQRRTAPLASARGIITTGPWAWSRHPNYWGEITLWLGLFLTSSRAFDAPNNLPGAYAAAVISPIFTFLILVFLSGCPLAEERYNERHGSEPWYLAYRTQTSPLLPLPPLIYRPLPLWLKRYALLELAMFEKGL 296
L +S L T LQL F +A+ Q DK+TD++G SNFV++ + H +RQ + + +WG RLG++LL RV+RRGHDARF++MR +F F+V Q WV++V++P++ N++P + +G D GW ++ G +VE WADQ+K F E RG++ TG W WSRHPNY+GEI W+G+FL+SS F G +V+SPI T +L+F+SG PLAE RY+ R G + +Y+ Y+ TSP++P PP +Y+ P +K+ EL + + L
Sbjct: 9 LVVSLLTTVVLQLSCFAIAFACQMDKITDLAGTSNFVVIAIGTLVAYSHYTARQIVLSTFVCIWGLRLGAFLLERVLRRGHDARFNDMRRDCGKFLGFWVAQIIWVWIVSLPVIFVNASPVNPGIGALDLFGWAIWLTGAIVEFWADQTKRDFREDDIN------RGLLRTGVWRWSRHPNYFGEICCWIGIFLSSSVTF------VGWEFVSVLSPILTTTLLMFVSGIPLAEARYDARFGLQHFYIEYKKSTSPIIPFPPTVYKNFPDIVKKILFCELNRYSRVL 283 The following BLAST results are available for this feature:
BLAST of EWM28688.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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