EWM28674.1, cds1906 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|585111097|gb|EWM28674.1| (amino acid permease-associated region [Nannochloropsis gaditana]) HSP 1 Score: 1218.37 bits (3151), Expect = 0.000e+0 Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 0 Query: 1 MGLNGRPASFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQRSTRRVYTTRCLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKDVTENGKGPLSPTDSLRRRHGGVGEFGKGQQLGRWGEGLDGKKGENLLRKPLLDGEDIV 612 MGLNGRPASFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQRSTRRVYTTRCLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKDVTENGKGPLSPTDSLRRRHGGVGEFGKGQQLGRWGEGLDGKKGENLLRKPLLDGEDIV Sbjct: 1 MGLNGRPASFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQRSTRRVYTTRCLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKDVTENGKGPLSPTDSLRRRHGGVGEFGKGQQLGRWGEGLDGKKGENLLRKPLLDGEDIV 612
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|1026768399|gb|OAE28571.1| (hypothetical protein AXG93_2175s1550 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 352.829 bits (904), Expect = 1.166e-110 Identity = 212/579 (36.61%), Postives = 329/579 (56.82%), Query Frame = 0 Query: 9 SFWRHIHDRALHLKS------EAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYP-QAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPV--PVTELF-----SLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQR-----------------STRRVYTTRCLVALLPACALPLSL-HKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFIL-WTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKD 554 ++W A+ K+ G D +DG L+R+LG W L +LG+G SIGAG+F +TG A AGP VV S++ +G + ++ALCY+E++SR+P G +LY + TF EL A +V +N++ DY + AA + RS A YL LK L P + L V P + F S++L+AP+LL + T VLC+G A++N ++T K+ ++LLV G F V +W PF P GL A+ + ++ VFF+YVGFD +A+S+EE + P +D+PRAI++S+ +C +Y AVCLV+TGMVP+ +D AAPL+SAF GL ++ ++I +G V GL TT+LIGL+ Q+R++LG+ RDGLLP+ A+++ + TPV AQ G + LA F NV LS +L +G+++ Y VCA +++ R RR + A + L ++Y A A ++ L L VP+ +Y P FACPAVP +P+ +++N++L L AW R ++ ++LY V+ ++ + + +D G+ + K D Sbjct: 2 TWWSEFQHAAVRFKNIPMRHGNTGNDLKGNSEDGG---SSLERKLGLWDLILLGIGASIGAGIFVVTGTVAQDAGPGVVLSFLLAGGASILNALCYAELSSRFPAHVGGAYLYAYFTFNELTAFIVFVNVMFDYHIGAASVIRSLASYLATLLK---LIPAFSILPEVFGPGGKEFYGGWVSINLMAPILLTIITFVLCQGVRESAIVNGVMTVTKIVIVLLVVLAGSFEVDVSNWTPFAPFGLPAIVQGATVVFFAYVGFDAVANSAEETKHPQKDLPRAIIISVLSCALLYVAVCLVVTGMVPYYELDAAAPLTSAFISKGLNFMSSLIGVGAVAGLTTTVLIGLYVQSRLYLGVGRDGLLPSLFAKVNSKHHTPVIAQIWVGIVAGVLATFINVSHLSHILSVGILIGYSVVCACVVVLRVLPEEQWRSDERQGGAKDVRRTQGAVGCTLVTAALGFAIGLCYRYGAHP---AFAISLLLLELLCAVPMYTHQEYFEPSG---FACPAVPTLPLFSILVNMFLFAQLHWEAWVRFAVVTLLALILYGVYGQFHSTI--ETVQDKGSSQYLKAPDGD 566
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|1173763905|ref|XP_020551779.1| (cationic amino acid transporter 9, chloroplastic-like [Sesamum indicum]) HSP 1 Score: 345.895 bits (886), Expect = 3.327e-108 Identity = 212/554 (38.27%), Postives = 315/554 (56.86%), Query Frame = 0 Query: 10 FWRHIHDRALHLKSEAGADPDT----EGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGL--GPVPAWLAP-VPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQR--------STRRVYTTRC--LVALLPACALPLS---LHKYKASTGILALDTAI-WLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRD 541 FW AL K A A PDT E DG L R+LG + L +LG+G SIGAG+F +TG A AGP V S+I +G+ ++ALCY+E+ASR+P G +LYT+ F E+ A LV L++DY + AA ++RS A Y+V L+ +P+W+ V S++++AP++L+L T+VLCRG ++LN+I+T K+ ++L V +G F V +W PF P G +++ ++ VFF+YVGFD +A+S+EE + P RD+P I+ SL CV +Y VCLV+TGMVP+ + APL+ AF GL +V +IS G V GL TTLL+GL+ Q+R++LG+ RDGLLPA A++HP TP+++Q G + LA NV +LS +L +G + Y V A ++ R ++ ++ ++R ++ LL + L ++ AS L + I LS + V + P PPG F+CP VP VP + LN++L L AW R +L I+ ++ YG F D D Sbjct: 25 FW----SSALRSKPLAPA-PDTSVRAESGDG------LVRRLGLFDLILLGIGASIGAGIFVVTGTVAHDAGPGVTISFIIAGVSCVLNALCYAELASRFPAVVGGAYLYTYSAFNEITAFLVFTQLMLDYHIGAASVARSLASYVVTVLELIPFFKDNIPSWVGHGEEVLGALSINILAPIILVLLTVVLCRGVGESSILNSIMTVTKILIVLFVIIVGAFKVNVSNWTPFAPNGFKSILTGATVVFFAYVGFDAVANSAEESKRPQRDLPLGIIGSLMVCVALYIGVCLVITGMVPYQYLGEEAPLAEAFTSKGLKYVSVLISFGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPAMFAKVHPTRHTPIHSQVWVGLIASTLACLLNVHVLSHILSVGSLTGYSVVSACVVRLRWKDETSSQASTKLISSRAEGIIYLLAIACCGFTAGVLFRFGASFIFLIVAAVIGILSAAALYVRHIHPN-----PPG--FSCPGVPVVPSISIYLNMFLFAQLHYEAWVRFVVL--SIVALGIYASYGQFHADPDAAD 558
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|168062753|ref|XP_001783342.1| (predicted protein [Physcomitrella patens] >gi|162665143|gb|EDQ51837.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 346.28 bits (887), Expect = 4.250e-108 Identity = 217/556 (39.03%), Postives = 324/556 (58.27%), Query Frame = 0 Query: 9 SFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHL---------KRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK-HAGLGPVPAWLAPVPVTELF----SLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQR-STRRVYT-----------TRCLVALLPACALPLSLHKYKA-----STGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWT-GILLYYVWTEYG 531 S+W A +KS P G+ G H + L R+LG L +LG+G SIGAG+F +TG A AGPAVV S+ + +AL Y+E++SR+P G ++Y++ TF EL A LV +L++DY + AA I+RS A YLV L+ + +P W+ P + ELF S++++APLLL+ T++LC+G + +V+N ++T AKV+++L+V A+G F V +W PF P GL V ++ VFF+YVGFD +A+S+EEC++P RD+P ILVSL C G+Y AVC V+TGMVP+ + APL++AF GL +V +IS+G V GL TT+L+GL+ Q+R++LG+ RDGLLPA A+I +TPV AQ G + LA FFNV LS +L +G + +Y VCA +++ R +T + TR A+L C L +SL + + G + + + + +L+PLL +Y P FACP VP +PV + N++L L AW R ++ +L+Y + +Y Sbjct: 11 SWWSQFSSSATRIKSA----PPLFGN-GTTHSKRLGGISSDGGLSRKLGLADLILLGIGASIGAGIFVVTGTVAHDAGPAVVVSFALAATACVPNALSYAELSSRFPALVGGAYMYSYSTFNELTAFLVFCHLMLDYHIGAASITRSLASYLVTSLQIFPIVKALPPWVGPGGL-ELFGGALSINVIAPLLLVGLTIILCQGVKESSVVNDVMTIAKVSIVLMVIAVGSFEVDTSNWTPFTPNGLTPVITGATVVFFAYVGFDAVANSAEECKNPQRDLPIGILVSLFVCAGLYVAVCFVVTGMVPYINLGGDAPLANAFMDKGLNFVSILISVGAVCGLTTTVLVGLYVQSRLYLGLGRDGLLPAFFAKIDAHHQTPVTAQVWVGSVAAILAGFFNVSHLSHILSVGCLASYSIVCACVVMLRINTENQWQDGEDQLPQKGLTRWNEAVL--CMLGISLCGFLVGLCYRTGGPVTYEIVLLVIMGLLLIPLLTRQEYRRPSG---FACPWVPLLPVLSIGFNMFLFAQLHWEAWVRFGVVTAIAVLVYAFYGQYN 555
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|902240837|gb|KNA26095.1| (hypothetical protein SOVF_000150 [Spinacia oleracea]) HSP 1 Score: 343.584 bits (880), Expect = 3.948e-107 Identity = 210/565 (37.17%), Postives = 318/565 (56.28%), Query Frame = 0 Query: 9 SFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK--HAGLGPVPAWLA--PVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLL----QRSTRRVYTTR--------CLVALLPACALPLSL-HKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYF-LRGDDRRDVGARRTRKERPKD 554 +++ H + A K A D + G L R+LG +L ++GVG SIGAG+F +TG A GPAV +I +G ++ALCY+E++SR+P G +LYT+ F EL A LV L++DY + AA I+RS A Y V L+ + G +P+W+ +FS + +AP+LL + TLVLCRG +++N+ +T KV ++++V G F V +W PF P G AV ++ VFF+YVGFD +A+S+EE ++P RD+P I+ SL C+G+Y VCLV+TGMVP+D + APL+SAF GL +V +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP A++HP+ TPVN+Q G + +A NV +LS +L +G + Y V A +L ++S + T+R + +L C L +++ AS L + I L+ L L +R + PPG F+CPAVP++P + N++L L AW R ++ ++ ++ YG F + + RT E P Sbjct: 19 NWFSHFWESARRSKPLAPNSSDVHTNSG----DGLVRRLGLLELVLIGVGASIGAGIFVVTGTVARDVGPAVTLCFILAGASCILNALCYAELSSRFPAVVGGAYLYTYSAFNELTAFLVFAQLMLDYHIGAASIARSLASYAVALLELFPSIKGNIPSWIGHGTDDFLGVFSFNALAPILLFILTLVLCRGVGESSIVNSFMTVTKVVIVIVVIVSGAFKVDVSNWSPFAPNGYGAVLTGATVVFFAYVGFDAVANSAEESKNPQRDLPLGIIGSLLICIGLYIGVCLVITGMVPYDLLGEDAPLASAFTSKGLKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPKLFAKVHPKRHTPVNSQIWVGLVASVMAGLLNVHVLSHILSVGTLTGYSVVAACVLSLRFEEKSPSQASTSRFSKWAEGVIYLVVLACCGFGAGLTYRFGASYFFLIIPLVIALAALVAL--YVR--QVYSNPPG--FSCPAVPFLPALCIFFNMFLFAQLHYEAWVRFLVV--SLITLGIYAFYGQFHAKPISDETIVYHRTSPESPHS 571
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|593332397|ref|XP_007139624.1| (hypothetical protein PHAVU_008G045400g [Phaseolus vulgaris] >gi|561012757|gb|ESW11618.1| hypothetical protein PHAVU_008G045400g [Phaseolus vulgaris]) HSP 1 Score: 336.265 bits (861), Expect = 1.758e-104 Identity = 200/506 (39.53%), Postives = 299/506 (59.09%), Query Frame = 0 Query: 43 LKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPV-----PAWLAP-VPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQR----STRRVYTTR------CLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYG 531 L R+LG L +LG+G SIGAG+F +TG A AGP V S+I +G I+ALCY+E+ASR+P G +LYT+ F EL A LV L++DY + AA I+RS A YL++ L+ L PV P W+ + ++ S++++AP LL+L T VLC+G +V+N I+T K+ ++++V G+F V +W PF P GL+A+F ++ VFF+YVGFD +A+S+EE + P RD+P I+ SL C+ +Y VCLV+TGMVP++ + APL+ AF GL ++ +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP+ A++H TP+++Q G + LA NV +LS +L +G + Y V A +++ R ++ +V ++ CL+A+ ++Y AS L L I LV R A PG F+CP VP +P + N++L L AW R IL I++ V+ YG Sbjct: 45 LSRRLGVIDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFSQLMLDYHIGAASIARSLANYLINILE---LFPVFKDNIPKWIGHGESIGDVLSINILAPTLLMLITFVLCQGVRESSVVNCIMTVTKIIIVIIVIFAGVFEVDVSNWSPFAPNGLKAIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYNLLGEDAPLADAFTSKGLKFISVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHSTRHTPIHSQIWVGLVASVLAGLLNVHVLSHILSVGTLTGYSVVSACVVVLRWKDKTSSQVSSSAEREGVICLIAVALCGFATGVFYRYDASFIFLILTIVIAAGASVALV--FR--QVYADTPG--FSCPGVPILPNICIFFNMFLFAQLHQEAWMRFVIL--SIVMIGVYAIYG 539
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|18390592|ref|NP_563754.1| (cationic amino acid transporter 9 [Arabidopsis thaliana] >gi|75308782|sp|Q9C5D6.1|CAAT9_ARATH RecName: Full=Cationic amino acid transporter 9, chloroplastic; Flags: Precursor >gi|13430818|gb|AAK26031.1|AF360321_1 unknown protein [Arabidopsis thaliana] >gi|21280891|gb|AAM44938.1| unknown protein [Arabidopsis thaliana] >gi|332189800|gb|AEE27921.1| cationic amino acid transporter 9 [Arabidopsis thaliana] >gi|1032302170|gb|OAP16495.1| CAT9 [Arabidopsis thaliana]) HSP 1 Score: 334.724 bits (857), Expect = 1.020e-103 Identity = 211/548 (38.50%), Postives = 311/548 (56.75%), Query Frame = 0 Query: 4 NGRPASFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK--HAGLGPVPAWLAPVP--VTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCA---ALLLQRSTRRVYTTR----------CLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYF 533 N R +S H RA L+S++ P ++ L R+LG + L +LGVG SIGAGVF +TG A AGP V S++ +G ++ALCY+E++SR+P G ++Y++ F E+ A LV + L++DY + AA ISRS A Y V L+ A G +P W+ + L SL+++AP+LL L TLVLC+G + +N+++T+ KV ++L+V G F + +W PF P G +AV ++ VFFSYVGFD +A+S+EE ++P RD+P I+ SL C+ +Y VCLVLTGMVPF + APL+ AF+ G+ +V +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP+ +RIHP TP+++Q CG + LA FNV LS +L +G + Y V A AL L R + R CLV + + +++ AS + L + V +L A P G F+CP VP VP + N++L L AW R ++ +L V+ YG + Sbjct: 9 NQRLSSATWFSHFRASALRSKSLPPPSSQTAVRSTSGDSLVRRLGLFDLILLGVGASIGAGVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELSSRFPAVVGGAYMYSYSAFNEITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPALKGSIPLWMGSGKELLGGLLSLNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFEIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESKNPQRDLPIGIMGSLLVCISLYIGVCLVLTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFSRIHPTLHTPLHSQIWCGIVAGVLAGIFNVHSLSHILSVGTLTGYSVVAACVVALRLNDKKDRESSNRWTSSWQEGVICLVIIACSGFGAGVFYRFSASVIFILLSVGV----AVVASAVLHYRQAYALPLGSGFSCPGVPIVPSVCIFFNIFLFAQLHYEAWIRFVVV--SVLATAVYALYGQY 550
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|731360915|ref|XP_010692074.1| (PREDICTED: cationic amino acid transporter 9, chloroplastic [Beta vulgaris subsp. vulgaris] >gi|870847602|gb|KMS99949.1| hypothetical protein BVRB_1g017940 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 334.724 bits (857), Expect = 1.081e-103 Identity = 202/547 (36.93%), Postives = 312/547 (57.04%), Query Frame = 0 Query: 27 ADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK--HAGLGPVPAWLA--PVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLL----QRSTRRVYTTRC--------LVALLPACALPLS-LHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYF-LRGDDRRDVGARRTRKERPKD 554 +D T DG L R+LG ++L ++G+G SIGAG+F +TG A AGPAV +I +G+ ++ALCY+E++SR+P G +LYT+ F EL A LV L++DY + AA I+RS A Y V L+ + G +P+W+ +FS++++AP+LL + T+VLC G +++N+ +T KV ++++V G F V +W PF P G AVF ++ VFF+YVGFD +A+S+EE ++P RD+P I+ SL CV +Y VCLV+TGMVP++ + APL++AF GL +V +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP A++HP+ +TP+N+Q G + +A NV +LS +L +G + Y V A +L ++S + C + +L C ++++ AS L + I L L VL LR PG F+CPA+P++P + N++L L AW R + ++ ++ YG F + + RT E P Sbjct: 43 SDVRTNSGDG------LVRRLGLFELVLIGIGASIGAGIFVVTGTVARDAGPAVTLCFIIAGVSCILNALCYAELSSRFPAVVGGAYLYTYSAFNELTAFLVFAQLMLDYHIGAASIARSLASYAVALLELFPSIKGNIPSWIGHGTDDFLGVFSINVLAPILLFILTIVLCWGVGESSIVNSFMTITKVVIVIIVIIAGAFKVDVSNWSPFAPNGYGAVFTGATVVFFAYVGFDAVANSAEESKNPQRDLPLGIIGSLLICVALYIGVCLVITGMVPYNLLGEDAPLATAFTAKGLKFVSVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPQLFAKVHPKRRTPINSQFWVGLVASVMAGLLNVHVLSHILSVGTLTGYSVVAACVLSLRFEEKSVSQASPRWCSKWAEGVIWLVVLACCGFGAGVMYRFGASYFFLIIPLTIALVALVVL--YLR--QVYTDAPG--FSCPAIPFLPALCIFFNIFLFAQLHYEAWVRF--IGISLITVGIYAFYGQFHAKPSSGETIVYHRTSPESPHS 575
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|720062128|ref|XP_010275402.1| (PREDICTED: cationic amino acid transporter 9, chloroplastic [Nelumbo nucifera]) HSP 1 Score: 332.028 bits (850), Expect = 1.073e-102 Identity = 215/538 (39.96%), Postives = 304/538 (56.51%), Query Frame = 0 Query: 16 DRALHLKSEAGADPDT--EGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPV-----PAWLAPVPVTELF----SLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLL---------QRSTRRVYTTR----CLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWAR---LFILWTGILLYY 525 AL K+ G+ DT G + L R+LG + L +LG+G SIGAG+F +TG A AGP V S+I +G+ ++ALCY+E+ASR+P G +LYT+ F EL A LV L++DY + AA I+RS A YLV L+ L P+ P+W+ E F S++++AP+L L T++LCRG + LN+ +T KV ++LLV +G F V +W PF P G +A+ ++ VFF+YVGFD +A+S+EE + P RD+P IL SL C +Y AVCLV+TGMVP+ + APL+ AF GL +V +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP+ ARIHP TPV++Q G + L+ FNV +LS +L +G + Y V A ++ Q S R + T CL+ L+ C L Y+ + + L I ++ L LV R P G F CP VP VP + N++L L AW R L I+ GI +Y Sbjct: 29 SSALRTKTLTGSSSDTYIRTPSG----EGLVRRLGLFDLILLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGVACMLNALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFTQLMLDYHIGAASIARSLASYLVTILE---LFPIFRENIPSWIGHGG-KEFFGGALSINILAPILFALLTIILCRGVRESSALNSFMTMTKVVIVLLVILVGTFEVDVSNWSPFAPNGFKAIVTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGILGSLLICAVLYIAVCLVITGMVPYKLLGEDAPLAEAFTSKGLKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFARIHPSLHTPVHSQVWVGVVAGVLSGLFNVHVLSHILSVGSLTGYSVVSACVITLRWNDKAANQVSPRWISTWNEGVICLL-LVACCGFGAGL-CYRFNASFIMLMIVILIAMLGALVLHYR--QVYTDPSG--FRCPGVPIVPAVCIFFNIFLFAQLHHEAWLRFVVLSIISVGIYAFY 552
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|923917128|ref|XP_013728010.1| (PREDICTED: cationic amino acid transporter 9, chloroplastic [Brassica napus] >gi|923917131|ref|XP_013728011.1| PREDICTED: cationic amino acid transporter 9, chloroplastic [Brassica napus]) HSP 1 Score: 331.643 bits (849), Expect = 1.482e-102 Identity = 210/545 (38.53%), Postives = 303/545 (55.60%), Query Frame = 0 Query: 30 DTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK--HAGLGPVPAWLAPVPVTELF----SLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCA---ALLLQRSTRRVYTTR----------CLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKD 554 T GD L R+LG + L +LGVG SIGAGVF +TG A AGP V S++ +G ++ALCY+E+ASR+P G ++Y++ F E+ A LV + L++DY + AA ISRS A Y V L+ A G +P W+ ELF S +++AP+LL L TLVLC+G + +N+++T+ KV ++L+V G F + +W PF P G +AV ++ VFFSYVGFD +A+S+EE +P RD+P I+ SL C+ +Y VCLVLTGMVPF + APL+ AF+ G+ +V +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP+ +RIHP TP+++Q CG + LA FNV LS +L +G + Y V A AL L + R + R CLV + + +++ AS L L + +S +L A G F CP VP VP + N++L L AW R ++ +L V+ YG + D + R E + Sbjct: 42 STSGDS-------LVRRLGLFDLILLGVGASIGAGVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELASRFPAVVGGAYMYSYSAFNEITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPAFKGCIPLWIGSGQ--ELFGGFLSFNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFDIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESNNPQRDLPIGIMGSLLVCISLYIGVCLVLTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSRIHPTLHTPLHSQIWCGIVAAVLAGIFNVHSLSHILSVGTLTGYSVVAACVVALRLNDNKERESSNRWTSSWHEGVICLVIIACSGFGAGVFYRFSASVIFLLLSVGVAVSA----SAVLHYRRAYAQSLGSGFCCPGVPIVPCVCIFFNIFLFAQLHYEAWIRFVVV--SVLATAVYALYGQY-HADASTLIYQRAPESESDSE 570 The following BLAST results are available for this feature:
BLAST of EWM28674.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|