EWM28674.1, cds1906 (CDS) Nannochloropsis gaditana

Overview
NameEWM28674.1
Unique Namecds1906
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:454225..454300 -
Alignment locationCM002458.1:452334..454096 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28674.1
Productamino acid permease-associated region
Orig transcript idgnl|cribi|Naga_100002g110.4793.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:454225..454300 -
CM002458.1supercontigCM002458.1:452334..454096 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0003333amino acid transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0005773vacuole
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR029485CAT_C
IPR002293AA/rel_permease1
Homology
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|585111097|gb|EWM28674.1| (amino acid permease-associated region [Nannochloropsis gaditana])

HSP 1 Score: 1218.37 bits (3151), Expect = 0.000e+0
Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 0
Query:    1 MGLNGRPASFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQRSTRRVYTTRCLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKDVTENGKGPLSPTDSLRRRHGGVGEFGKGQQLGRWGEGLDGKKGENLLRKPLLDGEDIV 612
            MGLNGRPASFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQRSTRRVYTTRCLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKDVTENGKGPLSPTDSLRRRHGGVGEFGKGQQLGRWGEGLDGKKGENLLRKPLLDGEDIV
Sbjct:    1 MGLNGRPASFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQRSTRRVYTTRCLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKDVTENGKGPLSPTDSLRRRHGGVGEFGKGQQLGRWGEGLDGKKGENLLRKPLLDGEDIV 612          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|1026768399|gb|OAE28571.1| (hypothetical protein AXG93_2175s1550 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 352.829 bits (904), Expect = 1.166e-110
Identity = 212/579 (36.61%), Postives = 329/579 (56.82%), Query Frame = 0
Query:    9 SFWRHIHDRALHLKS------EAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYP-QAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPV--PVTELF-----SLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQR-----------------STRRVYTTRCLVALLPACALPLSL-HKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFIL-WTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKD 554
            ++W      A+  K+        G D     +DG      L+R+LG W L +LG+G SIGAG+F +TG  A  AGP VV S++ +G  + ++ALCY+E++SR+P   G  +LY + TF EL A +V +N++ DY + AA + RS A YL   LK   L P  + L  V  P  + F     S++L+AP+LL + T VLC+G    A++N ++T  K+ ++LLV   G F V   +W PF P GL A+ + ++ VFF+YVGFD +A+S+EE + P +D+PRAI++S+ +C  +Y AVCLV+TGMVP+  +D AAPL+SAF   GL ++ ++I +G V GL TT+LIGL+ Q+R++LG+ RDGLLP+  A+++ +  TPV AQ   G +   LA F NV  LS +L +G+++ Y  VCA +++ R                   RR         +  A    + L ++Y A     A   ++ L  L   VP+    +Y  P     FACPAVP +P+  +++N++L   L   AW R  ++    ++LY V+ ++   +  +  +D G+ +  K    D
Sbjct:    2 TWWSEFQHAAVRFKNIPMRHGNTGNDLKGNSEDGG---SSLERKLGLWDLILLGIGASIGAGIFVVTGTVAQDAGPGVVLSFLLAGGASILNALCYAELSSRFPAHVGGAYLYAYFTFNELTAFIVFVNVMFDYHIGAASVIRSLASYLATLLK---LIPAFSILPEVFGPGGKEFYGGWVSINLMAPILLTIITFVLCQGVRESAIVNGVMTVTKIVIVLLVVLAGSFEVDVSNWTPFAPFGLPAIVQGATVVFFAYVGFDAVANSAEETKHPQKDLPRAIIISVLSCALLYVAVCLVVTGMVPYYELDAAAPLTSAFISKGLNFMSSLIGVGAVAGLTTTVLIGLYVQSRLYLGVGRDGLLPSLFAKVNSKHHTPVIAQIWVGIVAGVLATFINVSHLSHILSVGILIGYSVVCACVVVLRVLPEEQWRSDERQGGAKDVRRTQGAVGCTLVTAALGFAIGLCYRYGAHP---AFAISLLLLELLCAVPMYTHQEYFEPSG---FACPAVPTLPLFSILVNMFLFAQLHWEAWVRFAVVTLLALILYGVYGQFHSTI--ETVQDKGSSQYLKAPDGD 566          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|1173763905|ref|XP_020551779.1| (cationic amino acid transporter 9, chloroplastic-like [Sesamum indicum])

HSP 1 Score: 345.895 bits (886), Expect = 3.327e-108
Identity = 212/554 (38.27%), Postives = 315/554 (56.86%), Query Frame = 0
Query:   10 FWRHIHDRALHLKSEAGADPDT----EGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGL--GPVPAWLAP-VPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQR--------STRRVYTTRC--LVALLPACALPLS---LHKYKASTGILALDTAI-WLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRD 541
            FW      AL  K  A A PDT    E  DG      L R+LG + L +LG+G SIGAG+F +TG  A  AGP V  S+I +G+   ++ALCY+E+ASR+P   G  +LYT+  F E+ A LV   L++DY + AA ++RS A Y+V  L+        +P+W+     V    S++++AP++L+L T+VLCRG    ++LN+I+T  K+ ++L V  +G F V   +W PF P G +++   ++ VFF+YVGFD +A+S+EE + P RD+P  I+ SL  CV +Y  VCLV+TGMVP+  +   APL+ AF   GL +V  +IS G V GL TTLL+GL+ Q+R++LG+ RDGLLPA  A++HP   TP+++Q   G +   LA   NV +LS +L +G +  Y  V A ++  R        ++ ++ ++R   ++ LL       +   L ++ AS   L +   I  LS   + V  + P      PPG  F+CP VP VP   + LN++L   L   AW R  +L   I+   ++  YG F    D  D
Sbjct:   25 FW----SSALRSKPLAPA-PDTSVRAESGDG------LVRRLGLFDLILLGIGASIGAGIFVVTGTVAHDAGPGVTISFIIAGVSCVLNALCYAELASRFPAVVGGAYLYTYSAFNEITAFLVFTQLMLDYHIGAASVARSLASYVVTVLELIPFFKDNIPSWVGHGEEVLGALSINILAPIILVLLTVVLCRGVGESSILNSIMTVTKILIVLFVIIVGAFKVNVSNWTPFAPNGFKSILTGATVVFFAYVGFDAVANSAEESKRPQRDLPLGIIGSLMVCVALYIGVCLVITGMVPYQYLGEEAPLAEAFTSKGLKYVSVLISFGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPAMFAKVHPTRHTPIHSQVWVGLIASTLACLLNVHVLSHILSVGSLTGYSVVSACVVRLRWKDETSSQASTKLISSRAEGIIYLLAIACCGFTAGVLFRFGASFIFLIVAAVIGILSAAALYVRHIHPN-----PPG--FSCPGVPVVPSISIYLNMFLFAQLHYEAWVRFVVL--SIVALGIYASYGQFHADPDAAD 558          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|168062753|ref|XP_001783342.1| (predicted protein [Physcomitrella patens] >gi|162665143|gb|EDQ51837.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 346.28 bits (887), Expect = 4.250e-108
Identity = 217/556 (39.03%), Postives = 324/556 (58.27%), Query Frame = 0
Query:    9 SFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHL---------KRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK-HAGLGPVPAWLAPVPVTELF----SLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQR-STRRVYT-----------TRCLVALLPACALPLSLHKYKA-----STGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWT-GILLYYVWTEYG 531
            S+W      A  +KS     P   G+ G  H + L          R+LG   L +LG+G SIGAG+F +TG  A  AGPAVV S+  +      +AL Y+E++SR+P   G  ++Y++ TF EL A LV  +L++DY + AA I+RS A YLV  L+    +  +P W+ P  + ELF    S++++APLLL+  T++LC+G +  +V+N ++T AKV+++L+V A+G F V   +W PF P GL  V   ++ VFF+YVGFD +A+S+EEC++P RD+P  ILVSL  C G+Y AVC V+TGMVP+  +   APL++AF   GL +V  +IS+G V GL TT+L+GL+ Q+R++LG+ RDGLLPA  A+I    +TPV AQ   G +   LA FFNV  LS +L +G + +Y  VCA +++ R +T   +            TR   A+L  C L +SL  +       + G +  +  + +    +L+PLL   +Y  P     FACP VP +PV  +  N++L   L   AW R  ++    +L+Y  + +Y 
Sbjct:   11 SWWSQFSSSATRIKSA----PPLFGN-GTTHSKRLGGISSDGGLSRKLGLADLILLGIGASIGAGIFVVTGTVAHDAGPAVVVSFALAATACVPNALSYAELSSRFPALVGGAYMYSYSTFNELTAFLVFCHLMLDYHIGAASITRSLASYLVTSLQIFPIVKALPPWVGPGGL-ELFGGALSINVIAPLLLVGLTIILCQGVKESSVVNDVMTIAKVSIVLMVIAVGSFEVDTSNWTPFTPNGLTPVITGATVVFFAYVGFDAVANSAEECKNPQRDLPIGILVSLFVCAGLYVAVCFVVTGMVPYINLGGDAPLANAFMDKGLNFVSILISVGAVCGLTTTVLVGLYVQSRLYLGLGRDGLLPAFFAKIDAHHQTPVTAQVWVGSVAAILAGFFNVSHLSHILSVGCLASYSIVCACVVMLRINTENQWQDGEDQLPQKGLTRWNEAVL--CMLGISLCGFLVGLCYRTGGPVTYEIVLLVIMGLLLIPLLTRQEYRRPSG---FACPWVPLLPVLSIGFNMFLFAQLHWEAWVRFGVVTAIAVLVYAFYGQYN 555          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|902240837|gb|KNA26095.1| (hypothetical protein SOVF_000150 [Spinacia oleracea])

HSP 1 Score: 343.584 bits (880), Expect = 3.948e-107
Identity = 210/565 (37.17%), Postives = 318/565 (56.28%), Query Frame = 0
Query:    9 SFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK--HAGLGPVPAWLA--PVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLL----QRSTRRVYTTR--------CLVALLPACALPLSL-HKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYF-LRGDDRRDVGARRTRKERPKD 554
            +++ H  + A   K  A    D   + G      L R+LG  +L ++GVG SIGAG+F +TG  A   GPAV   +I +G    ++ALCY+E++SR+P   G  +LYT+  F EL A LV   L++DY + AA I+RS A Y V  L+   +  G +P+W+         +FS + +AP+LL + TLVLCRG    +++N+ +T  KV ++++V   G F V   +W PF P G  AV   ++ VFF+YVGFD +A+S+EE ++P RD+P  I+ SL  C+G+Y  VCLV+TGMVP+D +   APL+SAF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP+  TPVN+Q   G +   +A   NV +LS +L +G +  Y  V A +L     ++S  +  T+R          + +L  C     L +++ AS   L +   I L+ L  L   +R     + PPG  F+CPAVP++P   +  N++L   L   AW R  ++   ++   ++  YG F  +      +   RT  E P  
Sbjct:   19 NWFSHFWESARRSKPLAPNSSDVHTNSG----DGLVRRLGLLELVLIGVGASIGAGIFVVTGTVARDVGPAVTLCFILAGASCILNALCYAELSSRFPAVVGGAYLYTYSAFNELTAFLVFAQLMLDYHIGAASIARSLASYAVALLELFPSIKGNIPSWIGHGTDDFLGVFSFNALAPILLFILTLVLCRGVGESSIVNSFMTVTKVVIVIVVIVSGAFKVDVSNWSPFAPNGYGAVLTGATVVFFAYVGFDAVANSAEESKNPQRDLPLGIIGSLLICIGLYIGVCLVITGMVPYDLLGEDAPLASAFTSKGLKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPKLFAKVHPKRHTPVNSQIWVGLVASVMAGLLNVHVLSHILSVGTLTGYSVVAACVLSLRFEEKSPSQASTSRFSKWAEGVIYLVVLACCGFGAGLTYRFGASYFFLIIPLVIALAALVAL--YVR--QVYSNPPG--FSCPAVPFLPALCIFFNMFLFAQLHYEAWVRFLVV--SLITLGIYAFYGQFHAKPISDETIVYHRTSPESPHS 571          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|593332397|ref|XP_007139624.1| (hypothetical protein PHAVU_008G045400g [Phaseolus vulgaris] >gi|561012757|gb|ESW11618.1| hypothetical protein PHAVU_008G045400g [Phaseolus vulgaris])

HSP 1 Score: 336.265 bits (861), Expect = 1.758e-104
Identity = 200/506 (39.53%), Postives = 299/506 (59.09%), Query Frame = 0
Query:   43 LKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPV-----PAWLAP-VPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQR----STRRVYTTR------CLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYG 531
            L R+LG   L +LG+G SIGAG+F +TG  A  AGP V  S+I +G    I+ALCY+E+ASR+P   G  +LYT+  F EL A LV   L++DY + AA I+RS A YL++ L+   L PV     P W+     + ++ S++++AP LL+L T VLC+G    +V+N I+T  K+ ++++V   G+F V   +W PF P GL+A+F  ++ VFF+YVGFD +A+S+EE + P RD+P  I+ SL  C+ +Y  VCLV+TGMVP++ +   APL+ AF   GL ++  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP+  A++H    TP+++Q   G +   LA   NV +LS +L +G +  Y  V A +++ R    ++ +V ++       CL+A+          ++Y AS   L L   I       LV   R     A  PG  F+CP VP +P   +  N++L   L   AW R  IL   I++  V+  YG
Sbjct:   45 LSRRLGVIDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFSQLMLDYHIGAASIARSLANYLINILE---LFPVFKDNIPKWIGHGESIGDVLSINILAPTLLMLITFVLCQGVRESSVVNCIMTVTKIIIVIIVIFAGVFEVDVSNWSPFAPNGLKAIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYNLLGEDAPLADAFTSKGLKFISVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHSTRHTPIHSQIWVGLVASVLAGLLNVHVLSHILSVGTLTGYSVVSACVVVLRWKDKTSSQVSSSAEREGVICLIAVALCGFATGVFYRYDASFIFLILTIVIAAGASVALV--FR--QVYADTPG--FSCPGVPILPNICIFFNMFLFAQLHQEAWMRFVIL--SIVMIGVYAIYG 539          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|18390592|ref|NP_563754.1| (cationic amino acid transporter 9 [Arabidopsis thaliana] >gi|75308782|sp|Q9C5D6.1|CAAT9_ARATH RecName: Full=Cationic amino acid transporter 9, chloroplastic; Flags: Precursor >gi|13430818|gb|AAK26031.1|AF360321_1 unknown protein [Arabidopsis thaliana] >gi|21280891|gb|AAM44938.1| unknown protein [Arabidopsis thaliana] >gi|332189800|gb|AEE27921.1| cationic amino acid transporter 9 [Arabidopsis thaliana] >gi|1032302170|gb|OAP16495.1| CAT9 [Arabidopsis thaliana])

HSP 1 Score: 334.724 bits (857), Expect = 1.020e-103
Identity = 211/548 (38.50%), Postives = 311/548 (56.75%), Query Frame = 0
Query:    4 NGRPASFWRHIHDRALHLKSEAGADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK--HAGLGPVPAWLAPVP--VTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCA---ALLLQRSTRRVYTTR----------CLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYF 533
            N R +S     H RA  L+S++   P ++          L R+LG + L +LGVG SIGAGVF +TG  A  AGP V  S++ +G    ++ALCY+E++SR+P   G  ++Y++  F E+ A LV + L++DY + AA ISRS A Y V  L+   A  G +P W+      +  L SL+++AP+LL L TLVLC+G    + +N+++T+ KV ++L+V   G F +   +W PF P G +AV   ++ VFFSYVGFD +A+S+EE ++P RD+P  I+ SL  C+ +Y  VCLVLTGMVPF  +   APL+ AF+  G+ +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP+  +RIHP   TP+++Q  CG +   LA  FNV  LS +L +G +  Y  V A   AL L     R  + R          CLV +  +       +++ AS   + L   +      V   +L      A P G  F+CP VP VP   +  N++L   L   AW R  ++   +L   V+  YG +
Sbjct:    9 NQRLSSATWFSHFRASALRSKSLPPPSSQTAVRSTSGDSLVRRLGLFDLILLGVGASIGAGVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELSSRFPAVVGGAYMYSYSAFNEITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPALKGSIPLWMGSGKELLGGLLSLNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFEIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESKNPQRDLPIGIMGSLLVCISLYIGVCLVLTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFSRIHPTLHTPLHSQIWCGIVAGVLAGIFNVHSLSHILSVGTLTGYSVVAACVVALRLNDKKDRESSNRWTSSWQEGVICLVIIACSGFGAGVFYRFSASVIFILLSVGV----AVVASAVLHYRQAYALPLGSGFSCPGVPIVPSVCIFFNIFLFAQLHYEAWIRFVVV--SVLATAVYALYGQY 550          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|731360915|ref|XP_010692074.1| (PREDICTED: cationic amino acid transporter 9, chloroplastic [Beta vulgaris subsp. vulgaris] >gi|870847602|gb|KMS99949.1| hypothetical protein BVRB_1g017940 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 334.724 bits (857), Expect = 1.081e-103
Identity = 202/547 (36.93%), Postives = 312/547 (57.04%), Query Frame = 0
Query:   27 ADPDTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK--HAGLGPVPAWLA--PVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLL----QRSTRRVYTTRC--------LVALLPACALPLS-LHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYF-LRGDDRRDVGARRTRKERPKD 554
            +D  T   DG      L R+LG ++L ++G+G SIGAG+F +TG  A  AGPAV   +I +G+   ++ALCY+E++SR+P   G  +LYT+  F EL A LV   L++DY + AA I+RS A Y V  L+   +  G +P+W+         +FS++++AP+LL + T+VLC G    +++N+ +T  KV ++++V   G F V   +W PF P G  AVF  ++ VFF+YVGFD +A+S+EE ++P RD+P  I+ SL  CV +Y  VCLV+TGMVP++ +   APL++AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP+ +TP+N+Q   G +   +A   NV +LS +L +G +  Y  V A +L     ++S  +     C         + +L  C      ++++ AS   L +   I L  L VL   LR        PG  F+CPA+P++P   +  N++L   L   AW R   +   ++   ++  YG F  +      +   RT  E P  
Sbjct:   43 SDVRTNSGDG------LVRRLGLFELVLIGIGASIGAGIFVVTGTVARDAGPAVTLCFIIAGVSCILNALCYAELSSRFPAVVGGAYLYTYSAFNELTAFLVFAQLMLDYHIGAASIARSLASYAVALLELFPSIKGNIPSWIGHGTDDFLGVFSINVLAPILLFILTIVLCWGVGESSIVNSFMTITKVVIVIIVIIAGAFKVDVSNWSPFAPNGYGAVFTGATVVFFAYVGFDAVANSAEESKNPQRDLPLGIIGSLLICVALYIGVCLVITGMVPYNLLGEDAPLATAFTAKGLKFVSVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPQLFAKVHPKRRTPINSQFWVGLVASVMAGLLNVHVLSHILSVGTLTGYSVVAACVLSLRFEEKSVSQASPRWCSKWAEGVIWLVVLACCGFGAGVMYRFGASYFFLIIPLTIALVALVVL--YLR--QVYTDAPG--FSCPAIPFLPALCIFFNIFLFAQLHYEAWVRF--IGISLITVGIYAFYGQFHAKPSSGETIVYHRTSPESPHS 575          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|720062128|ref|XP_010275402.1| (PREDICTED: cationic amino acid transporter 9, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 332.028 bits (850), Expect = 1.073e-102
Identity = 215/538 (39.96%), Postives = 304/538 (56.51%), Query Frame = 0
Query:   16 DRALHLKSEAGADPDT--EGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPV-----PAWLAPVPVTELF----SLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLL---------QRSTRRVYTTR----CLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWAR---LFILWTGILLYY 525
              AL  K+  G+  DT      G    + L R+LG + L +LG+G SIGAG+F +TG  A  AGP V  S+I +G+   ++ALCY+E+ASR+P   G  +LYT+  F EL A LV   L++DY + AA I+RS A YLV  L+   L P+     P+W+      E F    S++++AP+L  L T++LCRG    + LN+ +T  KV ++LLV  +G F V   +W PF P G +A+   ++ VFF+YVGFD +A+S+EE + P RD+P  IL SL  C  +Y AVCLV+TGMVP+  +   APL+ AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP+  ARIHP   TPV++Q   G +   L+  FNV +LS +L +G +  Y  V A ++          Q S R + T      CL+ L+  C     L  Y+ +   + L   I ++ L  LV   R       P G  F CP VP VP   +  N++L   L   AW R   L I+  GI  +Y
Sbjct:   29 SSALRTKTLTGSSSDTYIRTPSG----EGLVRRLGLFDLILLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGVACMLNALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFTQLMLDYHIGAASIARSLASYLVTILE---LFPIFRENIPSWIGHGG-KEFFGGALSINILAPILFALLTIILCRGVRESSALNSFMTMTKVVIVLLVILVGTFEVDVSNWSPFAPNGFKAIVTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGILGSLLICAVLYIAVCLVITGMVPYKLLGEDAPLAEAFTSKGLKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFARIHPSLHTPVHSQVWVGVVAGVLSGLFNVHVLSHILSVGSLTGYSVVSACVITLRWNDKAANQVSPRWISTWNEGVICLL-LVACCGFGAGL-CYRFNASFIMLMIVILIAMLGALVLHYR--QVYTDPSG--FRCPGVPIVPAVCIFFNIFLFAQLHHEAWLRFVVLSIISVGIYAFY 552          
BLAST of EWM28674.1 vs. NCBI_GenBank
Match: gi|923917128|ref|XP_013728010.1| (PREDICTED: cationic amino acid transporter 9, chloroplastic [Brassica napus] >gi|923917131|ref|XP_013728011.1| PREDICTED: cationic amino acid transporter 9, chloroplastic [Brassica napus])

HSP 1 Score: 331.643 bits (849), Expect = 1.482e-102
Identity = 210/545 (38.53%), Postives = 303/545 (55.60%), Query Frame = 0
Query:   30 DTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQA-GTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLK--HAGLGPVPAWLAPVPVTELF----SLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCA---ALLLQRSTRRVYTTR----------CLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKD 554
             T GD        L R+LG + L +LGVG SIGAGVF +TG  A  AGP V  S++ +G    ++ALCY+E+ASR+P   G  ++Y++  F E+ A LV + L++DY + AA ISRS A Y V  L+   A  G +P W+      ELF    S +++AP+LL L TLVLC+G    + +N+++T+ KV ++L+V   G F +   +W PF P G +AV   ++ VFFSYVGFD +A+S+EE  +P RD+P  I+ SL  C+ +Y  VCLVLTGMVPF  +   APL+ AF+  G+ +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP+  +RIHP   TP+++Q  CG +   LA  FNV  LS +L +G +  Y  V A   AL L  +  R  + R          CLV +  +       +++ AS   L L   + +S       +L      A   G  F CP VP VP   +  N++L   L   AW R  ++   +L   V+  YG +   D    +  R    E   +
Sbjct:   42 STSGDS-------LVRRLGLFDLILLGVGASIGAGVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELASRFPAVVGGAYMYSYSAFNEITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPAFKGCIPLWIGSGQ--ELFGGFLSFNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFDIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESNNPQRDLPIGIMGSLLVCISLYIGVCLVLTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSRIHPTLHTPLHSQIWCGIVAAVLAGIFNVHSLSHILSVGTLTGYSVVAACVVALRLNDNKERESSNRWTSSWHEGVICLVIIACSGFGAGVFYRFSASVIFLLLSVGVAVSA----SAVLHYRRAYAQSLGSGFCCPGVPIVPCVCIFFNIFLFAQLHYEAWIRFVVV--SVLATAVYALYGQY-HADASTLIYQRAPESESDSE 570          
The following BLAST results are available for this feature:
BLAST of EWM28674.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111097|gb|EWM28674.1|0.000e+0100.00amino acid permease-associated region [Nannochloro... [more]
gi|1026768399|gb|OAE28571.1|1.166e-11036.61hypothetical protein AXG93_2175s1550 [Marchantia p... [more]
gi|1173763905|ref|XP_020551779.1|3.327e-10838.27cationic amino acid transporter 9, chloroplastic-l... [more]
gi|168062753|ref|XP_001783342.1|4.250e-10839.03predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|902240837|gb|KNA26095.1|3.948e-10737.17hypothetical protein SOVF_000150 [Spinacia olerace... [more]
gi|593332397|ref|XP_007139624.1|1.758e-10439.53hypothetical protein PHAVU_008G045400g [Phaseolus ... [more]
gi|18390592|ref|NP_563754.1|1.020e-10338.50cationic amino acid transporter 9 [Arabidopsis tha... [more]
gi|731360915|ref|XP_010692074.1|1.081e-10336.93PREDICTED: cationic amino acid transporter 9, chlo... [more]
gi|720062128|ref|XP_010275402.1|1.073e-10239.96PREDICTED: cationic amino acid transporter 9, chlo... [more]
gi|923917128|ref|XP_013728010.1|1.482e-10238.53PREDICTED: cationic amino acid transporter 9, chlo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1911rna1911Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications