EWM28774.1, cds1904 (CDS) Nannochloropsis gaditana

Overview
NameEWM28774.1
Unique Namecds1904
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:448649..448718 +
Alignment locationCM002458.1:448994..449204 +
Alignment locationCM002458.1:449323..450199 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28774.1
Productgeranylgeranyl pyrophosphate synthase
Orig transcript idgnl|cribi|Naga_100002g113.4893.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:448649..448718 +
CM002458.1supercontigCM002458.1:448994..449204 +
CM002458.1supercontigCM002458.1:449323..450199 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR017446Polyprenyl_synth-rel
IPR008949Isoprenoid_synthase_dom
IPR000092Polyprenyl_synt
Homology
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|585111197|gb|EWM28774.1| (geranylgeranyl pyrophosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 776.933 bits (2005), Expect = 0.000e+0
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query:    1 MVGFTTSTCLVLSLAALSGTRTTAFQPAARPPASSCHSGTPSVSGPCSTNTRRHPRGWVMAAAATTADAHSTSRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            MVGFTTSTCLVLSLAALSGTRTTAFQPAARPPASSCHSGTPSVSGPCSTNTRRHPRGWVMAAAATTADAHSTSRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN
Sbjct:    1 MVGFTTSTCLVLSLAALSGTRTTAFQPAARPPASSCHSGTPSVSGPCSTNTRRHPRGWVMAAAATTADAHSTSRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|585111198|gb|EWM28775.1| (geranylgeranyl pyrophosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 651.744 bits (1680), Expect = 0.000e+0
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
Query:   60 MAAAATTADAHSTSRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            MAAAATTADAHSTSRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN
Sbjct:    1 MAAAATTADAHSTSRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 326          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|223997332|ref|XP_002288339.1| (geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] >gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 429.869 bits (1104), Expect = 2.076e-147
Identity = 216/317 (68.14%), Postives = 256/317 (80.76%), Query Frame = 0
Query:   69 AHSTSRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            A+ T+ T+   A+A  S    F L++YL  K   +ESAL+AS++   PQ  KI ESM YSL+AGGKRIRP++CIAACEM GG+ + AM  AVALEMIHTMSLIHDDLPSMDND LRRGKPTNHV++GEDVAILAGD+LLST+FEHVA+ T   V AE++V VIARL  SVGA GLAGGQVMDLECE K G  L++L WIH HKTA LL+V+VA+GA+LGGA+ EEV ACE +A++IGLAFQVADDILDVTAS+E LGKTAGKD   DKTTYPKLLGLE S+  AR+L+ EAK +L  FG RAAPLLAIAD+I++RKN
Sbjct:   28 AYPTTTTALNVASAETS----FSLDEYLASKIGPIESALEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLSTSFEHVARETKG-VSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHIHKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGKTAGKDEATDKTTYPKLLGLEESKAYARQLIDEAKESLAPFGDRAAPLLAIADFIIDRKN 339          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|219115519|ref|XP_002178555.1| (farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 423.705 bits (1088), Expect = 5.376e-145
Identity = 211/309 (68.28%), Postives = 247/309 (79.94%), Query Frame = 0
Query:   78 PSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAG-GTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            P     +++   FDLN+Y+ DK   +E ALD S+  T  +  KI E+M+YSL+AGGKRIRP++C+AACEM   G +  AM AAV+LEMIHTMSLIHDDLPSMDND LRRGKPT HVIYGEDVAILAGDALLS +F HVA+ T   V A+RV+ V+ RL  SVGA GLAGGQVMDLECEGK    LE+L WIHTHKTA LL+V+VA+GAI+GGASAEEV+ACE +AL+IGLAFQVADDILDVT STE LGKTAGKD + DKTTYPKLLGL+G+REEA RLV EAK +L  FG RA  LLA+AD+I+ RKN
Sbjct:   30 PRVTLQSTAATDFDLNQYIADKLPLIEKALDESVVSTEKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFNDGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLSDSFRHVAEQTKG-VAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHTHKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDEDTDKTTYPKLLGLDGAREEAERLVAEAKKSLEPFGDRATALLALADFIINRKN 337          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|676380781|ref|XP_009033669.1| (hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens] >gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens])

HSP 1 Score: 410.223 bits (1053), Expect = 1.842e-139
Identity = 215/314 (68.47%), Postives = 245/314 (78.03%), Query Frame = 0
Query:   73 SRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVA-KHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            S  + PS A+ A     FDL  Y   K  AVE ALD SL  T+P+   I ESMRYSLLAGGKR+RP+MCIAACEM GGT   AM  AVA+EMIHTMSLIHDDLP+MDND LRRG PTNHVIYG+DVAILAGDALLST+FEH A   T   +PAER+V  I RL  +VGA GLAGGQVMDLECE K GV LEELTWIHTHKTA LL+VSVAAGA+L GA+ ++V  CETYA DIG+AFQVADDILDVTA++E LGKTAGKD + DKTTYPKL+GL+G+R EA RL  EA  +L  +G +A PL+AIA YIVER+N
Sbjct:   39 SVLAEPSVASPAELAKDFDLKAYFAQKVAAVEKALDESLTCTTPETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGSTAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKLLEVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEMLGKTAGKDEDTDKTTYPKLMGLDGARAEADRLYSEAIDSLAPYGEKAVPLIAIAKYIVERQN 352          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|1210520957|dbj|GAX20190.1| (geranylgeranyl diphosphate synthase, type II [Fistulifera solaris])

HSP 1 Score: 407.142 bits (1045), Expect = 1.864e-138
Identity = 199/298 (66.78%), Postives = 239/298 (80.20%), Query Frame = 0
Query:   90 FDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEG--VGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            F+LN+Y++DK   VE ALD SL    PQ A+I E+M+YSL+AGGKRIRP++C+AACEM       AM AAVALEMIHTMSLIHDDLP++DND LRRGKPTNHV+YGEDVAILAGDALL+ +F HVA++     P ERV+ VI RL  + G  GLAGGQ+MDLECEGK    V L++L WIHTHKTA LL+V+VA+GAILGGAS  +VE  E +AL++GLAFQVADDILDVT STE LGKTAGKD N DKTTYPKLLGL+G+R EA RL+ EAK +L  +G +A PLLA+AD+I++RKN
Sbjct:   45 FNLNEYIMDKLPHVEKALDESLASDIPQTARIVEAMKYSLMAGGKRIRPVLCLAACEMFDENFHKAMPAAVALEMIHTMSLIHDDLPALDNDDLRRGKPTNHVVYGEDVAILAGDALLAQSFLHVAENCNDQ-PPERVLDVIRRLGHAFGPKGLAGGQMMDLECEGKPTGEVSLDDLRWIHTHKTAVLLEVAVASGAILGGASPADVERLEKFALNVGLAFQVADDILDVTQSTEELGKTAGKDENTDKTTYPKLLGLDGARAEAERLIQEAKKSLEPYGDKAVPLLALADFIIDRKN 341          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|1210515603|dbj|GAX25496.1| (geranylgeranyl diphosphate synthase, type II [Fistulifera solaris])

HSP 1 Score: 405.216 bits (1040), Expect = 1.047e-137
Identity = 199/298 (66.78%), Postives = 239/298 (80.20%), Query Frame = 0
Query:   90 FDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEG--VGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            F+LN+Y++DK   VE ALD SL    PQ A+I E+M+YSL+AGGKRIRP++C+AACEM       AM AAVALEMIHTMSLIHDDLP++DND LRRGKPTNHV+YGEDVAILAGDALL+ +F HVA++     P ERV+ VI RL  + G  GLAGGQ+MDLECEGK    V L++L WIHTHKTA LL+V+VA+GAILGGASA +VE  E +AL++GLAFQVADDILDVT STE LGKTAGKD N DKTTYPKLLGL+G+R EA RL+ EAK +L  +G +A  LLA+AD+I++RKN
Sbjct:   45 FNLNEYIMDKLPHVEKALDESLASDIPQTARIVEAMKYSLMAGGKRIRPVLCLAACEMFDENFHKAMPAAVALEMIHTMSLIHDDLPALDNDDLRRGKPTNHVVYGEDVAILAGDALLAQSFLHVAENCNDQ-PPERVLDVIRRLGHAFGPKGLAGGQMMDLECEGKPTGEVSLDDLRWIHTHKTAVLLEVAVASGAILGGASAADVERLEKFALNVGLAFQVADDILDVTQSTEELGKTAGKDENTDKTTYPKLLGLDGARAEAERLIQEAKKSLEPYGDKAVTLLALADFIIDRKN 341          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|551589889|ref|XP_005779411.1| (geranylgeranyl pyrophosphate synthase [Emiliania huxleyi CCMP1516] >gi|485631924|gb|EOD26982.1| geranylgeranyl pyrophosphate synthase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 403.675 bits (1036), Expect = 3.260e-137
Identity = 212/326 (65.03%), Postives = 246/326 (75.46%), Query Frame = 0
Query:   60 MAAAATTADAHSTSRTSSPSAAASASSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            + AA  TA A S    S  +   + ++  AFDL  Y+ +K+   E ALDASL+ T  Q   I ESMRYSLLAGGKR+RP++C+AA EM GG    A   AV+LEMIHTMSLIHDDLP+MDND  RRGKPTNHV+YG+DVAILAGDA+LSTAFE+VA +T   V AERVV V+  L  SVG  GLAGGQVMDL+CEG+  VG++ L WIHT+KTAALLK +V  GA L GAS E++  CETYA  IGLAFQVADDILDVTASTE LGKTAGKDL+ DKTTYPKLLGL+ SRE AR LV EAKAAL  +G RAAPLL +ADYI+ R N
Sbjct:   12 LCAAYGTARAPSGRHASRLAVDPAMAATTAFDLKAYMEEKRVYTEEALDASLRSTCSQTDLIVESMRYSLLAGGKRVRPMLCLAATEMLGGDISVATPTAVSLEMIHTMSLIHDDLPAMDNDDFRRGKPTNHVLYGDDVAILAGDAMLSTAFEYVAANTKG-VAAERVVQVLRMLGESVGPMGLAGGQVMDLKCEGQPDVGIDTLQWIHTYKTAALLKAAVCCGAALAGASDEDLARCETYANKIGLAFQVADDILDVTASTEELGKTAGKDLDADKTTYPKLLGLDRSREVARELVDEAKAALEPYGERAAPLLGLADYIISRSN 336          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|1011540598|ref|WP_062433345.1| (polyprenyl synthetase family protein [Synechococcus sp. PCC 73109] >gi|975876886|gb|AMA08829.1| farnesyl-diphosphate synthase [Synechococcus sp. PCC 73109])

HSP 1 Score: 386.341 bits (991), Expect = 7.405e-131
Identity = 196/296 (66.22%), Postives = 230/296 (77.70%), Query Frame = 0
Query:   90 FDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            F L +YL ++K  VE+ALD SL +T P    I E+MRYSLLAGGKR+RPI+C+AACEM GGTA  AM  A ALEMIHTMSLIHDDLP+MDND LRRGKPTNH +YGED+AILAGDALLS AFE+VA+ TP  VPAER++ VI RL  +VGA GL GGQV+DLE EGK  V +E L +IHTHKT ALL+V V AGAIL GA +EEV+    YA +IGLAFQ+ DDILD+TA+ E LGKTAGKDL   K TYP L G+E S+ EAR+LV EA A+L  +G RA PL A+A+YIV RKN
Sbjct:   11 FSLAQYLQEQKTIVETALDQSLVITEP--VTIYEAMRYSLLAGGKRLRPILCLAACEMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPD-VPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLNFIHTHKTGALLEVCVTAGAILAGAKSEEVQLLSRYAQNIGLAFQIVDDILDITATAEELGKTAGKDLEAQKVTYPSLWGIEKSQAEARKLVAEAIASLEPYGERANPLKALAEYIVNRKN 302          
BLAST of EWM28774.1 vs. NCBI_GenBank
Match: gi|662037524|ref|WP_030006210.1| (polyprenyl synthetase family protein [Synechococcus sp. NKBG042902])

HSP 1 Score: 384.03 bits (985), Expect = 5.582e-130
Identity = 195/296 (65.88%), Postives = 229/296 (77.36%), Query Frame = 0
Query:   90 FDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385
            F L +YL ++K  VE+ALD SL +T P    I E+MRYSLLAGGKR+RPI+C+AACEM GGTA  AM  A ALEMIHTMSLIHDDLP+MDND LRRGKPTNH +YGED+AILAGDALLS AFE+VA+ TP  VPAER++ VI RL  +VGA GL GGQV+DLE EGK  V +E L +IHTHKT ALL+V V AGAIL GA  EEV+    YA +IGLAFQ+ DDILD+TA+ E LGKTAGKDL   K TYP L G+E S+ EAR+LV EA A+L  +G +A PL A+A+YIV RKN
Sbjct:   11 FSLAQYLQEQKTIVETALDQSLVITEP--VTIYEAMRYSLLAGGKRLRPILCLAACEMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPD-VPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELGKTAGKDLEAQKVTYPSLWGIEKSQAEARKLVAEAIASLEPYGEKANPLKALAEYIVNRKN 302          
The following BLAST results are available for this feature:
BLAST of EWM28774.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111197|gb|EWM28774.1|0.000e+0100.00geranylgeranyl pyrophosphate synthase [Nannochloro... [more]
gi|585111198|gb|EWM28775.1|0.000e+0100.00geranylgeranyl pyrophosphate synthase [Nannochloro... [more]
gi|223997332|ref|XP_002288339.1|2.076e-14768.14geranylgeranyl pyrophosphate synthetase [Thalassio... [more]
gi|219115519|ref|XP_002178555.1|5.376e-14568.28farnesyltranstransferase [Phaeodactylum tricornutu... [more]
gi|676380781|ref|XP_009033669.1|1.842e-13968.47hypothetical protein AURANDRAFT_52464 [Aureococcus... [more]
gi|1210520957|dbj|GAX20190.1|1.864e-13866.78geranylgeranyl diphosphate synthase, type II [Fist... [more]
gi|1210515603|dbj|GAX25496.1|1.047e-13766.78geranylgeranyl diphosphate synthase, type II [Fist... [more]
gi|551589889|ref|XP_005779411.1|3.260e-13765.03geranylgeranyl pyrophosphate synthase [Emiliania h... [more]
gi|1011540598|ref|WP_062433345.1|7.405e-13166.22polyprenyl synthetase family protein [Synechococcu... [more]
gi|662037524|ref|WP_030006210.1|5.582e-13065.88polyprenyl synthetase family protein [Synechococcu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1909rna1909Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications