EWM28703.1, cds1902 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|585111126|gb|EWM28703.1| (sulfate permease family [Nannochloropsis gaditana]) HSP 1 Score: 591.652 bits (1524), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
Query: 1 MSFQDVASHSHSYENGAMNGGVRYGNGGALTSKPVVTFGESNGRSIYASGSRSATNGSTDHTPGSSVPPLRHALLQYQQQVQLFEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQAGCSLS 295
MSFQDVASHSHSYENGAMNGGVRYGNGGALTSKPVVTFGESNGRSIYASGSRSATNGSTDHTPGSSVPPLRHALLQYQQQVQLFEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQAGCSLS
Sbjct: 1 MSFQDVASHSHSYENGAMNGGVRYGNGGALTSKPVVTFGESNGRSIYASGSRSATNGSTDHTPGSSVPPLRHALLQYQQQVQLFEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQAGCSLS 295
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|298708209|emb|CBJ30548.1| (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 94.3597 bits (233), Expect = 1.916e-19 Identity = 76/229 (33.19%), Postives = 119/229 (51.97%), Query Frame = 0
Query: 77 YQQQVQLFEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQ--KMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGNGDEPG--------AGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQAGCSLS 295
Y Q V L ++ + LG RD ELR Q + Q V+ E+ +++ + Q + EG + +D ARL K++KD R+ +L R+RE+ D R S + +E G +M+ Q ++ +Q+ Q E ++ ++QE EEE+ IN+S+ KVNEI+RDL +V +QQE ++ IE N + +HA A+ GL QV KA YQ C +S
Sbjct: 3 YSQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGA---SRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREV--------DAQRQSQVEEDEERARVAFAGAGGGQPQGMMQVQQRRERVQM-QEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 219
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|1021056126|emb|SAM08186.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 84.3445 bits (207), Expect = 3.667e-15 Identity = 58/207 (28.02%), Postives = 104/207 (50.24%), Query Frame = 0
Query: 84 FEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLMERQHGQQEMQLLQAE-DLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQ 289
E+L LGGPRD +++R++L +V L+ ++G+ + +LE QK+SKD Q++ F+ ++R + + RE + +L+ DE G ++ + ++Q L E + +E L+ ERE+EI+ I Q + ++NEIFRDLG LV+ Q I +I NV + + +++ A ++Q
Sbjct: 83 LERLVNFLGGPRDTADVRTKLH-------DVTEDTRNLIKDATNDIKGLTRANPSRQRKLEQQKLSKDFQKVLGDFQKIQRVSVSKQREYLDKAKATTAMLQSQAAEEEDEGGLDDDTTYIDDTQRRIQLQTLDNEIEYNEGLITEREDEIMGIEQGITELNEIFRDLGTLVNEQDSGIQSIYGNVLNVSQNTRQAADELTTANRHQ 282
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|1139837121|ref|XP_011454495.2| (PREDICTED: syntaxin-7-like isoform X2 [Crassostrea gigas]) HSP 1 Score: 83.5741 bits (205), Expect = 4.640e-15 Identity = 62/208 (29.81%), Postives = 111/208 (53.37%), Query Frame = 0
Query: 84 FEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKA-RLEVQKMSKDAQRLKLRFENLERATAVRLRE-LKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQ 289
EKL +++G RD E R ++ EV ++ ++V R ++ + S D+ + +V ++ D Q RF +L++ A ++++ KL+ + + G M + D+ ER+ +Q++Q ED D L+++REE I + ++ VNEIF+DL +V+ Q E ID+IE NV ++ ++G Q+AKAA+YQ
Sbjct: 51 LEKLMKMIGTERDSVESRDKIH-------EVSTKTNKIVQETSRQMKTISSMTGLDRQQKFQVDRLKNDFQEAVQRFTSLQKRAAEQVKKTFKLSSQTPKPKSSGGWMDDDDDEVKFLE---QERKREEQQIQDQIIED-DLTLIRDREERIRQLESDILDVNEIFKDLATMVNEQGETIDSIEGNVDKAYTNVETGTSQLAKAAEYQ 247
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|1139837119|ref|XP_011454494.2| (PREDICTED: syntaxin-7-like isoform X1 [Crassostrea gigas]) HSP 1 Score: 83.5741 bits (205), Expect = 5.887e-15 Identity = 62/208 (29.81%), Postives = 111/208 (53.37%), Query Frame = 0
Query: 84 FEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKA-RLEVQKMSKDAQRLKLRFENLERATAVRLRE-LKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQ 289
EKL +++G RD E R ++ EV ++ ++V R ++ + S D+ + +V ++ D Q RF +L++ A ++++ KL+ + + G M + D+ ER+ +Q++Q ED D L+++REE I + ++ VNEIF+DL +V+ Q E ID+IE NV ++ ++G Q+AKAA+YQ
Sbjct: 64 LEKLMKMIGTERDSVESRDKIH-------EVSTKTNKIVQETSRQMKTISSMTGLDRQQKFQVDRLKNDFQEAVQRFTSLQKRAAEQVKKTFKLSSQTPKPKSSGGWMDDDDDEVKFLE---QERKREEQQIQDQIIED-DLTLIRDREERIRQLESDILDVNEIFKDLATMVNEQGETIDSIEGNVDKAYTNVETGTSQLAKAAEYQ 260
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|565400940|ref|XP_006365975.1| (PREDICTED: syntaxin-22-like [Solanum tuberosum]) HSP 1 Score: 82.8037 bits (203), Expect = 8.095e-15 Identity = 83/258 (32.17%), Postives = 124/258 (48.06%), Query Frame = 0
Query: 42 NGRSIYASGSRSATNGSTDHTPGSSVPPLRHALLQYQQQVQLFEKLSRVLGGPRDDSELRSQLQAQ----GSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGNGDEPGAGGGGQ-----LMERQHGQQEMQLLQAE-DLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQ 289
+GRS+ R NG D T + + Q V F++L LG P+D ELR +L G +VK+ ++++Q R VE SK D K++KD Q + F+ +R A R E + +L S +G+ + GQ L+E + +QE+ LL E +E +++ERE+ I + Q + +VNEIF+DL LV Q ID I N+++SHAA G Q+AKAAK Q
Sbjct: 8 SGRSV--GPRRGFVNGKQDTTQA-----VASGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSTKLKQASETDHR-VEVSASKKITDA------KLAKDFQAVLKEFQKAQRLAAER--ETAYTPFVPQAVL-PSSYTDGEVDVSSDKGQEQRALLVESR--RQEVLLLDNEISFNEAIIEEREQGIQEVQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIENSHAATAQGRSQLAKAAKTQ 246
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|1149592228|gb|OON01532.1| (hypothetical protein BSLG_07803 [Batrachochytrium salamandrivorans]) HSP 1 Score: 83.1889 bits (204), Expect = 8.459e-15 Identity = 64/222 (28.83%), Postives = 105/222 (47.30%), Query Frame = 0
Query: 72 HALLQYQQQVQLFEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHA---QLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQA 290
+++ Q V ++L + G RD E+R QL +V R QL+ +L+ + VR + R+ +K+ KD + + RF+ + A + R+ R + G DEP G QL + + +E++ +E L+ ERE ++V I +S+ +VNEIFRDLG LV+ QQ +D IE NV + ++ A+ YQA
Sbjct: 61 NSIFQVSSNVATIQRLLNLFGSHRDTPEMRWQLH-------DVTERTRQLIKTTSLELKKIMAVRPSDGDRQIRITQKKLQKDFEEVLRRFQEASKIAAEKSRDYVTMARAQKMQTVVDEEGTEDEPLLGHSQQLSQLRALDEEVEF------NEALITEREHDLVGIERSIQEVNEIFRDLGTLVNEQQYLLDNIETNVGAVAVNVEGAHTELRTASAYQA 269
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|676495433|ref|XP_009066890.1| (hypothetical protein LOTGIDRAFT_237001 [Lottia gigantea] >gi|556093730|gb|ESO82383.1| hypothetical protein LOTGIDRAFT_237001 [Lottia gigantea]) HSP 1 Score: 82.8037 bits (203), Expect = 8.581e-15 Identity = 62/210 (29.52%), Postives = 105/210 (50.00%), Query Frame = 0
Query: 84 FEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRE-LKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLM---ERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQ 289
+K + +G RD +LR + + E + +LV +R ++ V +K + ++++ K+ D Q RF+ L++ +++ +KL R+A + G D Q ER+ QE Q + +DL L++EREE I + ++ VNEIFRDLG LVS Q E +D IE NV+ ++ + Q+++AA YQ
Sbjct: 54 IDKAMKSIGTDRDSVQLRDK-------IHETSQNISKLVQDSMRQLKVVGNKPADKQQKIQLSKLRNDFQESVERFQGLQKMATEKVKSSVKLGSRKATPQVDSGMTGWNDPDDFSDKTQFYHQEERRAELQEQQQVVEDDL--ALIREREERIRQLESDILDVNEIFRDLGALVSEQGETLDTIEANVERTYGNVEQANSQLSQAAVYQ 254
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|1104626176|ref|XP_019070058.1| (PREDICTED: syntaxin-22 isoform X2 [Solanum lycopersicum]) HSP 1 Score: 82.4185 bits (202), Expect = 9.664e-15 Identity = 84/262 (32.06%), Postives = 125/262 (47.71%), Query Frame = 0
Query: 42 NGRSIYASGSRSATNGSTDHTPGSSVPPLRHALLQYQQQVQLFEKLSRVLGGPRDDSELRSQLQAQ----GSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGNGDEPGAGGGGQ-----LMERQHGQQEMQLLQAE-DLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQAGCS 293
+GRS+ R NG D T + + Q V F++L LG P+D ELR +L G +VK+ ++++Q R VE SK D K++KD Q + F+ +R A R E + +L S +G+ + GQ L+E + +QE+ LL E +E +++ERE+ I + Q + +VNEIF+DL LV Q ID I N+++SHAA G Q+AKAAK Q S
Sbjct: 8 SGRSV--GPRRGFMNGKQDTTQA-----VASGIFQINTAVSTFQRLVNTLGTPKDTPELRDKLHKTRLHIGQLVKDTSTKLKQASETDHR-VEVSASKKITDA------KLAKDFQAVLKEFQKAQRLAAER--ETAYTPFIPQAVL-PSSYTDGEVDVSSDKGQEQRALLVESR--RQEVLLLDNEISFNEAIIEEREQGIQEVQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIENSHAATAQGRSQLAKAAKTQRSNS 250
BLAST of EWM28703.1 vs. NCBI_GenBank
Match: gi|224014130|ref|XP_002296728.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968583|gb|EED86929.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 83.9593 bits (206), Expect = 1.044e-14 Identity = 68/221 (30.77%), Postives = 126/221 (57.01%), Query Frame = 0
Query: 78 QQQVQLFEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVR--LRELKLAGRRAEDLLRGSGMGNGDEPGAGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKY-QAGCSLS 295
Q+ V L EK++R +G D+S L++Q Q V++++G+R+E+ + +Q S + E ++R K+S+D + ++ +F+N++ + L E + R E+ + NG G+ G ++M RQ MQ+ Q + ++E +++ERE EI I++ + +VNEI++DL LV QQE +D IE ++++ SGL+ + KA + Q+ C +S
Sbjct: 202 QRNVALLEKMARSVGTKNDNSVLQTQYNLQLDVIRQLGTRIEKQLQSQ-ESRLSTLPRTEAAQSRTTHVKLSRDYRLVEQQFKNVQLDVKKKRSLAEARQREIRIEEEEKERRRVNGGGEGSAGD-EVMRRQ-----MQI-QEDRINEEIMREREAEIRNIHKGMHQVNEIYKDLAHLVDNQQEGVDQIETQMENTKENTASGLKHIEKANESQQSQCVVS 414 The following BLAST results are available for this feature:
BLAST of EWM28703.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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