EWM28704.1, cds1899 (CDS) Nannochloropsis gaditana

Overview
NameEWM28704.1
Unique Namecds1899
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:442547..442591 +
Alignment locationCM002458.1:442843..443204 +
Alignment locationCM002458.1:443276..443390 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28704.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100002g116.4823.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:442547..442591 +
CM002458.1supercontigCM002458.1:442843..443204 +
CM002458.1supercontigCM002458.1:443276..443390 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28704.1 vs. NCBI_GenBank
Match: gi|585111127|gb|EWM28704.1| (hypothetical protein Naga_100002g116 [Nannochloropsis gaditana])

HSP 1 Score: 348.206 bits (892), Expect = 2.334e-121
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 
Query:    1 MASTSQSSPASPAPKGIYRPKLNLAYLFPHLRVEREVLRDLGDNVEMDPLGILDHGKCVLFAQPPPDIVTRLFFHFPGRAIRRRLPLVHFPLGEGPALPVPIADEENLVLRPIQAHTSVDWHRVLIAVKCLHEIRVEEEHPGAHPPESLHSTNTPVQAGKTSGPPRQALPPVD 173
            MASTSQSSPASPAPKGIYRPKLNLAYLFPHLRVEREVLRDLGDNVEMDPLGILDHGKCVLFAQPPPDIVTRLFFHFPGRAIRRRLPLVHFPLGEGPALPVPIADEENLVLRPIQAHTSVDWHRVLIAVKCLHEIRVEEEHPGAHPPESLHSTNTPVQAGKTSGPPRQALPPVD
Sbjct:    1 MASTSQSSPASPAPKGIYRPKLNLAYLFPHLRVEREVLRDLGDNVEMDPLGILDHGKCVLFAQPPPDIVTRLFFHFPGRAIRRRLPLVHFPLGEGPALPVPIADEENLVLRPIQAHTSVDWHRVLIAVKCLHEIRVEEEHPGAHPPESLHSTNTPVQAGKTSGPPRQALPPVD 173
The following BLAST results are available for this feature:
BLAST of EWM28704.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111127|gb|EWM28704.1|2.334e-121100.00hypothetical protein Naga_100002g116 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1904rna1904Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications