EWM28696.1, cds1891 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28696.1 vs. NCBI_GenBank
Match: gi|585111119|gb|EWM28696.1| (SOUL heme-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 1139.79 bits (2947), Expect = 0.000e+0 Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0
Query: 1 MVIQPFVFLSIARADEAEYLSGQSPIEFCSSDRALQALRHLAAMPLLHDSRTRPPICLKFGLIMCFTAIKWLGSASGFVAPINPDSHRARTSWTAATRLTPLPSAASSTLRISLLKCASATIDKATAVSVDNEESKEGPLDLFASQFEQYYNRALQGKPAQLKSLFATGATWSGVPLSEGNGDLQGVFDALDQGRAFMIEPFFAVTGWEATDRGMKLEWQLSGTWPFPYRPRVRAAGTSFITLDKGTGKMKQVEEQWHKPWWRVVLEQASPKGWDLWHLYLTPPAEKPLYRVVKKLSAVEIREYYPRLVIELEQHDARPDVQYTEWAWILPDFAFTDELKLQGRAQYRETYVATSPVESCVERVDWSPPLPPTGGQQPASSVAARRIRHHVPVPSHLGLDPLSPRLPSPSAKDVDTEAGQAGRYVRQPRRFMAVRAFKGLTQTQEYGASRRLLLEWCGKEGLRTVKNEKGKSRVWVQQHGMKAGFNMQGNFCLGIYEQASYSDWGEIAVEVERDPSWDSQEKGNRGSHKPCTIRTEKVRKVNMIEGIPCRPP 552
MVIQPFVFLSIARADEAEYLSGQSPIEFCSSDRALQALRHLAAMPLLHDSRTRPPICLKFGLIMCFTAIKWLGSASGFVAPINPDSHRARTSWTAATRLTPLPSAASSTLRISLLKCASATIDKATAVSVDNEESKEGPLDLFASQFEQYYNRALQGKPAQLKSLFATGATWSGVPLSEGNGDLQGVFDALDQGRAFMIEPFFAVTGWEATDRGMKLEWQLSGTWPFPYRPRVRAAGTSFITLDKGTGKMKQVEEQWHKPWWRVVLEQASPKGWDLWHLYLTPPAEKPLYRVVKKLSAVEIREYYPRLVIELEQHDARPDVQYTEWAWILPDFAFTDELKLQGRAQYRETYVATSPVESCVERVDWSPPLPPTGGQQPASSVAARRIRHHVPVPSHLGLDPLSPRLPSPSAKDVDTEAGQAGRYVRQPRRFMAVRAFKGLTQTQEYGASRRLLLEWCGKEGLRTVKNEKGKSRVWVQQHGMKAGFNMQGNFCLGIYEQASYSDWGEIAVEVERDPSWDSQEKGNRGSHKPCTIRTEKVRKVNMIEGIPCRPP
Sbjct: 1 MVIQPFVFLSIARADEAEYLSGQSPIEFCSSDRALQALRHLAAMPLLHDSRTRPPICLKFGLIMCFTAIKWLGSASGFVAPINPDSHRARTSWTAATRLTPLPSAASSTLRISLLKCASATIDKATAVSVDNEESKEGPLDLFASQFEQYYNRALQGKPAQLKSLFATGATWSGVPLSEGNGDLQGVFDALDQGRAFMIEPFFAVTGWEATDRGMKLEWQLSGTWPFPYRPRVRAAGTSFITLDKGTGKMKQVEEQWHKPWWRVVLEQASPKGWDLWHLYLTPPAEKPLYRVVKKLSAVEIREYYPRLVIELEQHDARPDVQYTEWAWILPDFAFTDELKLQGRAQYRETYVATSPVESCVERVDWSPPLPPTGGQQPASSVAARRIRHHVPVPSHLGLDPLSPRLPSPSAKDVDTEAGQAGRYVRQPRRFMAVRAFKGLTQTQEYGASRRLLLEWCGKEGLRTVKNEKGKSRVWVQQHGMKAGFNMQGNFCLGIYEQASYSDWGEIAVEVERDPSWDSQEKGNRGSHKPCTIRTEKVRKVNMIEGIPCRPP 552
BLAST of EWM28696.1 vs. NCBI_GenBank
Match: gi|298708609|emb|CBJ26096.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 149.443 bits (376), Expect = 1.415e-36 Identity = 123/368 (33.42%), Postives = 171/368 (46.47%), Query Frame = 0
Query: 155 LQGKPAQLKSLFATGATWSGVPLSEGNGDLQGVFDALDQGRAFMIEPFFAVTGWEATDRGMKLEWQLSGTWPFPYRPRVRAAGTSFITLDKG-TGKMKQVEEQWHKPWWRVVLEQASPKGWDLWHLYLTPPAEKPLYRVVKKLSAVEIREYYPRLVIELEQHDARPDVQYTEWAWILPDFAFTDELKLQGRAQYRETYVATSPVESCVERVDWSPPLPP----TGGQQPAS-SVAARRIRHHVPVPSHLGLDPLSPRLPSPSAKDVDTEAGQAGRYVRQPRRFMAVRAFKGLTQTQEYGASRRLLLEWCGKEGLRTVKNEKGKSRVWVQQHGMKAGFNMQGNFCLGI-YEQASYSDWGEIAVEVERDP 515
++G P L+ + A G W G PL N L V + L + + P +V + + D +LEW SGTWP P+ PR G S TL G GK+ ++ + W + L+ P WD+WH +PPAEKP YRVVK+ IREY PR+ + D + + A ILP F E+K GR + Y T P+E ++ + P G + AS S A RI VPVP+ +GLDP +LP P ++ E Q R+VRQ R +AV F G+ Q E R LL+ +G+ K G+ R + + A F G + I Y + Y G V VE DP
Sbjct: 1 MRGDPGVLRQVLAPGVEWRG-PLGN-NAGLAKVEEELRGLGSLLNAPRLSV--FASKDGAKRLEWVASGTWPLPWLPRFIVKGAS--TLQTGPDGKVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRMATQPSLIDYS-NSREIRKALILPGFCHDGEIKTSGRKP--DEYYVTGPLEVAIQPFIATGNFPNGTWFNGTTREASQSRRANRITWTVPVPTAMGLDPT--KLPEPPSERERGED-QRSRHVRQGARRIAVTNFNGIPQDPEAAEVRAKLLKRLAADGVEPAKGADGRVRSGILMYNSVACFTKAGKLAMSILYHRPKYIGIGN-EVFVELDP 355
BLAST of EWM28696.1 vs. NCBI_GenBank
Match: gi|873228747|emb|CEM14972.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 87.8113 bits (216), Expect = 1.459e-14 Identity = 111/447 (24.83%), Postives = 181/447 (40.49%), Query Frame = 0
Query: 144 ASQFEQYYNRALQGKPAQLKSLFATGATWS-----GVPLSEGNGDLQGVFDALDQGRAFMIEPFFAV---------TGWEATDRGMKLEWQLSGTWPFPY------RPRVRAAGTSFITLDKGTGKMKQVEEQWHKPWWRVVLEQASPKGWDLWHLYLT---PPAEKPLYRVVKKLSAVEIREYYPRLVIELE-----------QHDARPDVQYTEWAW-------------------------------ILPDFAFTDELKLQGRAQYRETYVATSPVESCVERVDWSPPLPPTGGQQPASSVAARRIRHHVPVPSHLGLDPLSPRLPSPSAKDVDTEA------GQAGRYVRQPRRFMAVRAFKGLT--QTQEYGASRRLLLEWCGKEGLRTVKNEKGKSRVWVQQHGMKAGFNMQGNFCLGIYEQASY---SDWGEIAVEVERD 514
A +FE N L G+P + LF A+W+ PLS VF L + ++ + A+ T + ++ ++L + SGT P + PRV +S +T++K TG++ +VE+ R EQ P+ ++ WH+ L P +E P +RV + ++ + PR V+E + Q D+ P +T W + P ++ E+K QY P V + S PL QQ ARR+ VP+PS G D ++PSP DV+ + RY QPRR +AV A G++ Q++ + +R L K GL+ +N +GK W++ +K GFN++G Y ++ E+ +E+E D
Sbjct: 204 AKEFENAVNFGLIGEPQYVDDLFDESASWTFPQFLPSPLSSR----AAVFSKLKELGSYWGDARVALLEVKTLEPETTTASDEQAIQLSYLFSGTSPLFFLGQYLSNPRVAIDVSSNVTVNKNTGRIVRVEDTSPYTPLRTFYEQIWPRIFEAWHIPLAKGGPRSEMPPHRVHHRRFVFDVVDVPPRAVLEGQFLDPTLGREGGQCDSLPRAFFTHVLWERGLRAEPFVNVAPAEVLLEPYTVERPWRVVMTPGRSYITEIKKDQEYQYN----VDEP--EIVANISLSTPL-----QQ-----DARRVTWVVPLPSAFGTD--IDQMPSP---DVNVRPLRRYLRDEKVRYSIQPRRRLAVTAAFGISDPQSRSLDSIKRGLFYAVQKRGLKVKRNREGKPLFWLRMWDVKVGFNLEGKCSRAWYPNDAWLAPFRRNELVLELEPD 625
BLAST of EWM28696.1 vs. NCBI_GenBank
Match: gi|1072221915|gb|OEU06692.1| (hypothetical protein FRACYDRAFT_278343 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 75.0998 bits (183), Expect = 9.556e-11 Identity = 81/339 (23.89%), Postives = 140/339 (41.30%), Query Frame = 0
Query: 205 VTGWEATDRGMKLEWQLSGTWPFPYRPRVRAAGTSFITL----------------DKGTGKMKQVEEQW------HKPWWRVVLEQASPKGWDLWHLYLTPPAEKPLYRVVKKLSAVEIREYYPRLV-----IELEQHDARPDVQYTEWAWILPDFAFTDELKLQGRAQYRETYVATSPVESCVERVDWSPPLPPTGGQQPASSVAARRIRHHVPVPSHLGLDPLSPRLPSP-SAKDVDTEAGQAGRYVRQPRRFMAVRAFKGLTQTQEYGASRRLLLEWCGKEGLRTVKNEKGKSRVWVQQHGMKAGFNMQGNFCLGIYE-QASYSDWGEIAVEVERD 514
V+G + +D +L W+LS WP + PRV GTS TL K +KQV+ + + ++ Q P+ WD +H+ +TP AE + K + + + PR+V IE + R A ++P+ AFT +K G +++YV T+PVE + R + R+ +P L+ LP P + D E+ Y Q R +A + G Q E R+ L E K+G + ++ GK + + Q+ +KA + + F + +Y+ + ++ E+ +E+ D
Sbjct: 153 VSGKKISDDVFELSWELSLIWPTFWAPRVFLVGTSTCTLADSSALRSAIEEGTTTSKAVSVIKQVDSVFGIDTGNSLSFVSMLGSQIVPRFWDWYHIGMTPTAELLPRHTLAKKGGISVYQIPPRMVTAPTIIETGTRENRH-------AEMIPNHAFTCVIKTMGPN--KKSYVPTTPVEVQIGR---------------KNDAEDDRLLIKWAIPLATQFQALNDNLPLPGDNSEDDEESFPTCDYEWQSLRQVATIKYGGYAQDPEISDIRKRLYEQVLKDGWKPKLDQNGKPQFFFWQNNVKACY-IDDGFGMSVYDWRPKFAKSNEVGIELVAD 466
BLAST of EWM28696.1 vs. NCBI_GenBank
Match: gi|1210520676|dbj|GAX20525.1| (hypothetical protein FisN_24Hh222 [Fistulifera solaris]) HSP 1 Score: 65.855 bits (159), Expect = 8.266e-8 Identity = 60/220 (27.27%), Postives = 104/220 (47.27%), Query Frame = 0
Query: 144 ASQFEQYYNRAL-QGKPAQLKSL-FATGATW-SGVPLSEGNGDLQGVFDALDQGRAFMIEPFFAVTGWEATDRG-MKLEWQLSGTWPFPYRPRVRAAGTSFITLDKGTGKMKQVEEQWHKPWWRVVLEQASPKGWDLWHLYLTPPAE-KPLYRVVKKLSAVEIREYYPRLVIELEQHDARPDVQYTEWAWILPDFAFTDELKLQGRAQYRETYVATSPVE 358
A +Q NR L Q + +Q+ + W + P+ E N ++ L AF A+T ++ + +++ W+++ WP + PR+ G S +++D G +QV+ K V +Q P+ WD++H+ +TP AE P + L + + E RL ++ Q D + T A ++P+ AFT +K G + R YV T+PVE
Sbjct: 106 ARSLQQQINRVLYQEEQSQVTEFTYKPSMEWETSFPVKEANPLME-----LKNALAFYEHVDVAITSAKSINSNTIEVRWEIAVAWPIFWEPRLLFTGQSILSMD-GNTITRQVDTLDEKDLLFSVAKQIFPRFWDIYHIGMTPSAELSPRFPQFGLLRSYNLYELPARLYLQPTQLDTGKRIDNT--AAMIPNHAFTCIIKTIGPQKQR--YVPTTPVE 315 The following BLAST results are available for this feature:
BLAST of EWM28696.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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