EWM28794.1, cds1887 (CDS) Nannochloropsis gaditana

Overview
NameEWM28794.1
Unique Namecds1887
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:408526..408709 +
Alignment locationCM002458.1:408919..409403 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28794.1
Productadenylate kinase 3 alpha like 1 variant 1
Orig transcript idgnl|cribi|Naga_100002g130.4913.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:408526..408709 +
CM002458.1supercontigCM002458.1:408919..409403 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0016776phosphotransferase activity, phosphate group as acceptor
GO:0004017adenylate kinase activity
GO:0005524ATP binding
GO:0019205nucleobase-containing compound kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR028586AK3/Ak4_mitochondrial
IPR027417P-loop_NTPase
IPR006259Adenyl_kin_sub
IPR007862Adenylate_kinase_lid-dom
IPR000850Adenylat/UMP-CMP_kin
Homology
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|585111217|gb|EWM28794.1| (adenylate kinase 3 alpha like 1 variant 1 [Nannochloropsis gaditana])

HSP 1 Score: 451.825 bits (1161), Expect = 1.094e-160
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query:    1 MGSVQRLTALILGPPGGGKGTISKKLLKDFNFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFLAGRSQE 222
            MGSVQRLTALILGPPGGGKGTISKKLLKDFNFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFLAGRSQE
Sbjct:    1 MGSVQRLTALILGPPGGGKGTISKKLLKDFNFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFLAGRSQE 222          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|553193416|ref|XP_005855770.1| (nucleoside-triphosphate--adenylate kinase, partial [Nannochloropsis gaditana CCMP526] >gi|422293290|gb|EKU20590.1| nucleoside-triphosphate--adenylate kinase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 328.176 bits (840), Expect = 9.396e-113
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query:   62 GALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFLAGRSQE 222
            GALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFLAGRSQE
Sbjct:    1 GALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFLAGRSQE 161          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|1210530570|dbj|GAX10795.1| (nucleoside-triphosphate--adenylate kinase [Fistulifera solaris])

HSP 1 Score: 254.603 bits (649), Expect = 4.089e-82
Identity = 126/207 (60.87%), Postives = 158/207 (76.33%), Query Frame = 0
Query:   10 LILGPPGGGKGTISKKLLKDFN-FLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPR-LLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDA 214
            LILGPPGGGKGTISKK+LKDF+ F H+STGD+LR+HVR +TA+G  A+ YM  G LVPDN+++DLV+ +        + LLLDGFPRTI QA+ALE    IDVV++LD+P  TI+ER+++RWIH ASGR Y+Y YNPPK  G DD+TGE LVQR+DDK E ++ RLE Y  IT PLV +Y  +G   TFSGT+SDVIYP VK  L++
Sbjct:   50 LILGPPGGGKGTISKKMLKDFSSFHHVSTGDLLRQHVRQRTALGIKAKGYMDSGELVPDNLMIDLVMEDATPYLEAGQSLLLDGFPRTIEQAMALEKVTHIDVVVNLDVPTDTIVERLADRWIHPASGRVYSYSYNPPKVAGKDDITGEDLVQRDDDKPEAIRKRLESYANITAPLVKYYEDKGLARTFSGTKSDVIYPQVKKFLES 256          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|1210520114|dbj|GAX20997.1| (nucleoside-triphosphate--adenylate kinase [Fistulifera solaris])

HSP 1 Score: 253.832 bits (647), Expect = 7.786e-82
Identity = 125/207 (60.39%), Postives = 158/207 (76.33%), Query Frame = 0
Query:   10 LILGPPGGGKGTISKKLLKDFN-FLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPR-LLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDA 214
            LILGPPGGGKGTISKK+LKDF+ F H+STGD+LR+HVR +TA+G  A+ YM  G LVPDN+++DLV+ +        + LLLDGFPRTI QA+ALE    IDVV++LD+P  TI+ER+++RWIH ASGR Y+Y YNPPK  G DD+TGE LVQR+DDK E ++ RLE Y  IT PLV +Y  +G   TFSGT+SD+IYP VK  L++
Sbjct:   50 LILGPPGGGKGTISKKMLKDFSSFHHVSTGDLLRQHVRQRTALGIKAKGYMDSGELVPDNLMIDLVMEDATPYLEAGQSLLLDGFPRTIEQAMALEKVTHIDVVVNLDVPTDTIVERLADRWIHPASGRVYSYSYNPPKVVGKDDITGEDLVQRDDDKPEAIRKRLESYANITAPLVKYYEDKGLAKTFSGTKSDIIYPQVKKFLES 256          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|1072230796|gb|OEU15529.1| (adenylate kinase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 246.899 bits (629), Expect = 3.918e-79
Identity = 125/212 (58.96%), Postives = 156/212 (73.58%), Query Frame = 0
Query:    9 ALILGPPGGGKGTISKKLLKDF-NFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELA---SKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFL 216
            ALILG PGGGKGTIS K+LKDF  F H+S+GD+LR HVR +T +G  A  YM  G LVPD+++V LV+ E      KG    LLLDGFPRT+ QA AL   V ID+V++LDIP++TI+ER+++RWIH  SGR Y+Y Y PPK +G+DD TGEPLVQR DDK ETV+ARLEQY + T+PLV +Y   G L +F GT+SDVIYP VK+ L+   
Sbjct:   47 ALILGKPGGGKGTISGKILKDFPQFHHVSSGDLLRNHVRKETTLGIKAAQYMKEGKLVPDDLMVGLVMDESTQYLEKGE--SLLLDGFPRTVVQAKALSDSVHIDMVVNLDIPNETIVERLTDRWIHEPSGRIYSYAYKPPKVEGLDDETGEPLVQRHDDKPETVRARLEQYDESTSPLVQYYENNGVLKSFHGTQSDVIYPKVKSWLEKCF 256          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|219121946|ref|XP_002181317.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407303|gb|EEC47240.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 244.202 bits (622), Expect = 7.964e-79
Identity = 123/206 (59.71%), Postives = 156/206 (75.73%), Query Frame = 0
Query:   10 LILGPPGGGKGTISKKLLKDF-NFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPR-LLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLD 213
            LILG PGGGKGTIS K+LKDF  F H+STGD+LR+HV + T +GK A+++M  G LVPD+++++L++ +        R LLLDGFPRT+ QA ALE    ID V++LDIP  TI+ERI++RWIH ASGR Y+Y Y PPK  G DDVTGEPLVQR+DDK E+V+ RL  Y ++T PLVD YR +G + TF GTESDVIYP VKA+L+
Sbjct:    2 LILGKPGGGKGTISGKILKDFPRFHHVSTGDLLRQHVNEGTQLGKEAKSFMESGKLVPDSLMINLLMDDAKPYIEEGRSLLLDGFPRTLQQAQALEEVAHIDTVVNLDIPTNTIVERIADRWIHPASGRIYSYSYKPPKAVGKDDVTGEPLVQRDDDKPESVRTRLAAYDKVTAPLVDWYRRKGLVQTFRGTESDVIYPQVKAYLE 207          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|926648025|ref|XP_013790412.1| (PREDICTED: GTP:AMP phosphotransferase AK3, mitochondrial-like [Limulus polyphemus])

HSP 1 Score: 244.973 bits (624), Expect = 7.998e-79
Identity = 115/208 (55.29%), Postives = 153/208 (73.56%), Query Frame = 0
Query:    9 ALILGPPGGGKGTISKKLLKDFNFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFL 216
            A+I+GPPG GKGTIS ++L+DF F HLS+GD+LR  +RD T  G  A  Y+ RG LVPD+++V LV+AEL S       LLDGFPRT+PQA AL+   S+  V++L++PD+ II+RI  RW+HA SGRTY  ++NPPK  G DDVTGEPLVQR DDK ETV+ARL  YK  +TP++++YR  G L  F+G ES+ I+P V+A+L + +
Sbjct:    8 AVIMGPPGSGKGTISSRILRDFAFKHLSSGDLLRAQIRDGTIAGVQASHYIERGELVPDDLVVQLVLAELRSHLKGDNWLLDGFPRTVPQAQALKESFSLSCVLNLNVPDEVIIDRIKGRWVHAESGRTYHTEFNPPKVPGFDDVTGEPLVQRHDDKPETVRARLNSYKNQSTPVLEYYRKTGLLQEFTGRESNEIWPRVRAYLSSLI 215          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|397629824|gb|EJK69521.1| (hypothetical protein THAOC_09214 [Thalassiosira oceanica])

HSP 1 Score: 244.588 bits (623), Expect = 3.945e-78
Identity = 123/213 (57.75%), Postives = 158/213 (74.18%), Query Frame = 0
Query:    8 TALILGPPGGGKGTISKKLLKDF-NFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELA---SKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFL 216
            + LILG PGGGKGTIS+K+L DF  F H+STGD LR+HVR+QT +G+ A+TYM  G LVPD ++V LV+ +      +G    LLLDGFPRT  QA AL+  + +D+ I+L +PD+TI+ERIS+RWIH ASGR Y+Y Y PPK +G+DD TG+PLVQR+DDK E+V  RL++Y++ T PLVD+Y  +G L TF GT SDVIYP VK  LD  L
Sbjct:   50 SLLILGKPGGGKGTISEKILSDFPQFRHVSTGDELRQHVRNQTEIGREAKTYMDVGGLVPDKLMVKLVMNDAVDAIKRGQ--NLLLDGFPRTAAQARALDDKLGVDLCINLCVPDETIVERISDRWIHPASGRVYSYSYKPPKVEGLDDETGDPLVQRDDDKPESVLKRLKKYEEATMPLVDYYSKKGVLQTFQGTMSDVIYPEVKKWLDEKL 260          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|999966756|gb|KXJ05930.1| (GTP:AMP phosphotransferase AK3, mitochondrial, partial [Exaiptasia pallida])

HSP 1 Score: 243.047 bits (619), Expect = 5.068e-78
Identity = 111/212 (52.36%), Postives = 160/212 (75.47%), Query Frame = 0
Query:    2 GSVQRLTALILGPPGGGKGTISKKLLKDFNFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLD 213
             S + + A+I+GPPG GKGT+S+++++DF   HLS+GD+LR H+++ T +GK A+ Y+ +G LVPDN++VDL + EL  +      LLDGFPRT+ QA  L  + +ID+V++LD+P +TIIERI  RWIH ASGR Y  ++NPPK  G DD+TGEPL+QREDDK ETVKARL++Y++ T PL+++Y     L +F+GTE++VI+P VK +L+
Sbjct:   17 ASYKPVHAIIMGPPGSGKGTVSERIVRDFGLDHLSSGDLLRSHIQNNTDIGKEAKKYIDKGHLVPDNLMVDLALKELEQRKS--GWLLDGFPRTVSQAEVLSQNQTIDIVVNLDVPFETIIERIKQRWIHFASGRVYNLEFNPPKVPGKDDITGEPLIQREDDKPETVKARLQKYEEQTKPLIEYYSNLNKLQSFAGTETNVIWPMVKKYLE 226          
BLAST of EWM28794.1 vs. NCBI_GenBank
Match: gi|999982766|gb|KXJ21913.1| (GTP:AMP phosphotransferase AK3, mitochondrial [Exaiptasia pallida])

HSP 1 Score: 242.662 bits (618), Expect = 1.456e-77
Identity = 111/212 (52.36%), Postives = 160/212 (75.47%), Query Frame = 0
Query:    2 GSVQRLTALILGPPGGGKGTISKKLLKDFNFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELASKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLD 213
             S + + A+I+GPPG GKGT+S+++++DF   HLS+GD+LR H+++ T +GK A+ Y+ +G LVPDN++VDL + EL  +      LLDGFPRT+ QA  L  + +ID+V++LD+P +TIIERI  RWIH ASGR Y  ++NPPK  G DD+TGEPL+QREDDK ETVKARL++Y++ T PL+++Y     L +F+GTE++VI+P VK +L+
Sbjct:   35 ASYKPVHAIIMGPPGSGKGTVSERIVRDFGLDHLSSGDLLRSHIQNNTDIGKEAKKYIDKGHLVPDNLMVDLALKELEQRKS--GWLLDGFPRTVSQAEVLSQNQTIDIVVNLDVPFETIIERIKQRWIHFASGRVYNLEFNPPKVPGKDDITGEPLMQREDDKPETVKARLQKYEEQTKPLIEYYSNLNKLQSFAGTETNVIWPVVKKYLE 244          
The following BLAST results are available for this feature:
BLAST of EWM28794.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111217|gb|EWM28794.1|1.094e-160100.00adenylate kinase 3 alpha like 1 variant 1 [Nannoch... [more]
gi|553193416|ref|XP_005855770.1|9.396e-113100.00nucleoside-triphosphate--adenylate kinase, partial... [more]
gi|1210530570|dbj|GAX10795.1|4.089e-8260.87nucleoside-triphosphate--adenylate kinase [Fistuli... [more]
gi|1210520114|dbj|GAX20997.1|7.786e-8260.39nucleoside-triphosphate--adenylate kinase [Fistuli... [more]
gi|1072230796|gb|OEU15529.1|3.918e-7958.96adenylate kinase [Fragilariopsis cylindrus CCMP110... [more]
gi|219121946|ref|XP_002181317.1|7.964e-7959.71predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|926648025|ref|XP_013790412.1|7.998e-7955.29PREDICTED: GTP:AMP phosphotransferase AK3, mitocho... [more]
gi|397629824|gb|EJK69521.1|3.945e-7857.75hypothetical protein THAOC_09214 [Thalassiosira oc... [more]
gi|999966756|gb|KXJ05930.1|5.068e-7852.36GTP:AMP phosphotransferase AK3, mitochondrial, par... [more]
gi|999982766|gb|KXJ21913.1|1.456e-7752.36GTP:AMP phosphotransferase AK3, mitochondrial [Exa... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1892rna1892Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications