EWM28675.1, cds1885 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|585111098|gb|EWM28675.1| (kinetochore protein spc25 [Nannochloropsis gaditana]) HSP 1 Score: 498.434 bits (1282), Expect = 2.585e-178 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query: 1 MNTGRSCDLSTFAFSMAATAEQLARSIAQDITETQARLDKWLENSRADLEGLEMRHEKALAEMVAERATLLARQAELKGKTDEGTRLSEQRQETLKAIEAEIARLKEKEADLPQELQLARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATIKSN 246
MNTGRSCDLSTFAFSMAATAEQLARSIAQDITETQARLDKWLENSRADLEGLEMRHEKALAEMVAERATLLARQAELKGKTDEGTRLSEQRQETLKAIEAEIARLKEKEADLPQELQLARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATIKSN
Sbjct: 1 MNTGRSCDLSTFAFSMAATAEQLARSIAQDITETQARLDKWLENSRADLEGLEMRHEKALAEMVAERATLLARQAELKGKTDEGTRLSEQRQETLKAIEAEIARLKEKEADLPQELQLARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATIKSN 246
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|219115966|ref|XP_002178778.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409545|gb|EEC49476.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 112.464 bits (280), Expect = 1.873e-26 Identity = 77/236 (32.63%), Postives = 129/236 (54.66%), Query Frame = 0
Query: 34 TQARLDKWLENSRADLEGLEMRHEKALAEMVAERA----------------TLLARQ-------AELKGKTDEGTRLSEQRQETLK---AIEAEIARLKEKEADLPQELQ-LARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEA-DRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKA 241
+++R++ W+E HEKA A+ V ER+ LLA Q +E + T + L+ +++E L+ A+E+EIA L +K+A +LQ L RE E ++ ++ +S+Q + DLT+G+V Y++LG+DF++A DN ++ FTQLD T P R++ F + +D+ D+Y V+ CDP + +++ L+++LN +D FV MR AFKA
Sbjct: 24 SRSRVETWVE------------HEKAQADAVYERSKQTRASHQHRIDQALTNLLALQLEGGLAVSETESTTKKEKNLAARKEELLREQEAVESEIASLAKKQAQRKAQLQELNGEREAEKAKVQGTRELKQRVQASKQTT-LEDLTKGIVNYQYLGIDFQKAQDNHMKFYFTQLDPTQPKRQFSFLLQVDDVDDQYIVDVCDPPIPEHILNELLSDLNADDDMLPFVIGMRHAFKA 246
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|470407543|ref|XP_004336048.1| (trichohyalin, putative [Acanthamoeba castellanii str. Neff] >gi|440792827|gb|ELR14035.1| trichohyalin, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 105.145 bits (261), Expect = 6.221e-24 Identity = 71/223 (31.84%), Postives = 122/223 (54.71%), Query Frame = 0
Query: 27 IAQDITETQARLDKWLENSRADLEGLEMRHEKALAEMVAERATLLARQAELKGKTDEGTR--LSEQRQETLKAIEAEIARLKEKEADLPQEL-QLARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYK-HLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLD--TAMVDGLVAELNQANDFAVFVKKMRRAFKATI 243
+ ++ + + L KW++ ++E ++ +H+ A A+ E A+L +Q + T++ R L+++ +E LK ++ I +L++KE LPQEL Q R EK+ Q+++ R L+E + L + V Y+ LGL+ +R N +R IF +D +P R++ F +H+D +DRY VEEC P +D AMV+ L D FV +R FKA++
Sbjct: 9 VVDEMDKARQELQKWMQERVRNVEDIKKKHQNATAKYTGEVASL-HQQMKSAESTEKSVRQELADEERE-LKRLQQMIKKLRDKENLLPQELEQRKREVEKQHQKLVTQDRQ-LAERQREHAQSLQALAQDVNRYRERLGLELQRVGINHMRFIFVYIDPNHPMRQFSFDLHLDSSDRYHVEECKPPVDGLAAMVEALNGN---GGDLTKFVVAIRNKFKASV 225
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|1210524362|dbj|GAX17091.1| (kinetochore protein Spc25, fungi type [Fistulifera solaris]) HSP 1 Score: 101.679 bits (252), Expect = 2.127e-22 Identity = 72/219 (32.88%), Postives = 108/219 (49.32%), Query Frame = 0
Query: 36 ARLDKWLENSRADLEGLEMRHEKALAEMVA--ERATLLARQAELKGKT--------DEGTRL--SEQRQETLKAIEAEIARLKEKEADL---PQELQLARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAF 239
++LD W+E H+K LA+ VA ++ + +QAE+ DE + E + +E E R++ + L QEL+ R E +E R E + I+DLTRG++ YK+LGLDFER D+KLR FTQLD +NPSR+++F + + E D + C+P + + + LV N+ D FV MRRAF
Sbjct: 29 SKLDTWVE------------HQKELADKVAAEQKEAIAKKQAEVDHHVTSLLALNIDENLYVDGKENVHDVQGRVENEQQRVETLQKQLDGKKQELEELRKEYNEFKERAVEVRRQKQETEMSKETTIDDLTRGIINYKYLGLDFERVPDDKLRFCFTQLDPSNPSRKFWFEMDVTELD-CSIPNCEPPIRSETREQLVQAFNKNEDMQEFVLGMRRAF 234
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|1210515857|dbj|GAX25380.1| (kinetochore protein Spc25, fungi type [Fistulifera solaris]) HSP 1 Score: 100.908 bits (250), Expect = 3.819e-22 Identity = 72/218 (33.03%), Postives = 107/218 (49.08%), Query Frame = 0
Query: 37 RLDKWLENSRADLEGLEMRHEKALAEMVA--ERATLLARQAELKGKT--------DEGTRL--SEQRQETLKAIEAEIARLKEKEADL---PQELQLARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAF 239
+LD W+EN +K LA+ VA ++A + +QAE+ DE + E + +E E R+ + L QEL+ R E +E R E + I+DLTRG++ YK+LGLDFER ++KLR FTQLD +NPSR+++F + + E D + C+P + + + LV N+ D FV MRRAF
Sbjct: 30 KLDTWVEN------------QKELADKVAAEQKAAIAKKQAEVDHNVTSLLALTIDENLHVDGKENVHDVQGRVETEQQRVDTLQKQLDGKKQELEELRKEYNEFKERAVEVRRQKQETEMSKETTIDDLTRGIINYKYLGLDFERVPNDKLRFCFTQLDPSNPSRKFWFEMDVTELD-CSIPNCEPPIRSETREQLVQAFNKNEDMQEFVLGMRRAF 234
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|470325357|ref|XP_004364432.1| (hypothetical protein CAOG_01564 [Capsaspora owczarzaki ATCC 30864] >gi|765549602|gb|KJE90223.1| hypothetical protein CAOG_001564 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 99.3673 bits (246), Expect = 1.055e-21 Identity = 74/240 (30.83%), Postives = 129/240 (53.75%), Query Frame = 0
Query: 13 AFSMAATAEQLARSIAQDITETQARL-DKWLENSRADLEGLEMRHEKALAEMVAERATLLARQAELKGKTDEGTRLSEQRQETLKAIEAEIARLKEKEADLPQELQLARAREKELQEILASKRAALSE----LSSRQGD---YINDLTRGVVMY-KHLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATI 243
+++M + EQL Q+ T AR+ D W ++ ++ ++RH K + + A L A +L ++ G L+ Q+ AEIA + + L Q+ +LA + ++++ +A++ AL LS R+ D + +LTRGV + + LGL +R + L+ IF +D N +RE+ FSV IDE + Y V+ C+P ++ + G+VA+LN N +VF+K +R+ FKA +
Sbjct: 3 SYNMERSLEQL-----QEDMLTAARMVDNWADSQLKEMRHAQLRHTKTMEDDKENAAKLQASLKQLGEHSEAGQILASQQ-------AAEIALSRSAVSQLQQQKELAMDTQNDIRQQIAAREQALVRETEMLSERERDAATSMKELTRGVQFFSERLGLKIQRTGKHHLQFIFRYIDPYNVNREFSFSVRIDEKNMYHVDVCEPMVED--LAGMVAQLNDDNQLSVFIKNIRKKFKAMV 228
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|922868921|gb|KOO35180.1| (kinetochore protein spc25 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 92.8189 bits (229), Expect = 3.791e-18 Identity = 54/153 (35.29%), Postives = 92/153 (60.13%), Query Frame = 0
Query: 95 LKAIEAEIARLKEKEADLPQELQLARAREKELQE--ILASKRAALSELSSRQGDY-INDLTRGVVMYK-HLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATI 243
++A++A++ +L +E LP E Q E++L + L ++ A+ E + R ++ + +L RG+ +YK LGL F++ D++LRL FT +D T+P R + V + D Y V+ C+PTL + GLV LN +NDF+ FV+ +R+ F+ I
Sbjct: 273 VEALKADLDKLHAQEQVLPPESQRL---EQQLTQSRALVTRSEAILEQAQRGMEHKLGELDRGISLYKARLGLAFDKVGDDRLRLTFTCIDPTDPERAFCLEVCVTVGDHYVVQSCEPTLTE--LPGLVHTLNASNDFSAFVRAVRKGFQKLI 420
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|919042479|ref|XP_013404492.1| (PREDICTED: kinetochore protein Spc25-like [Lingula anatina]) HSP 1 Score: 88.1965 bits (217), Expect = 2.380e-17 Identity = 56/207 (27.05%), Postives = 107/207 (51.69%), Query Frame = 0
Query: 38 LDKWLENSRADLEGLEMRHEKALAEMVAERATLLARQAELKGKTDEGTRLSEQRQETLKAIEAEIARLKEKEADLPQELQLARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYK-HLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATI 243
L++W + A + + RHE+ + + + L A +LKG+ ++ E+R +K + +I + + L +E +LA K +QE + ++ ++ +++L + +K LG+ F++ N+L+++FT +D + SR +FFSV I+ Y V +C+P ++ + LV +LN N+F FV MR FKA +
Sbjct: 38 LEEWSGDMTAAMAEQKKRHEEVMRKGKEDMEALKATLEQLKGQAKTNQKVMEERIGKMKQLREDIGTVTTETDSLLREKELAMEEMKSMQEYIQKQKELITAQEQATHQRLDELQKASEWFKDRLGIQFKKTSGNRLQMVFTCIDPKDTSRPFFFSVKIEADGTYTVSDCEPEIEN--LPELVEKLNATNNFRSFVITMRTLFKAKV 242
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|545707339|ref|XP_005705984.1| (kinetochore protein Spc25, animal type [Galdieria sulphuraria] >gi|452822445|gb|EME29464.1| kinetochore protein Spc25, animal type [Galdieria sulphuraria]) HSP 1 Score: 86.2705 bits (212), Expect = 7.775e-17 Identity = 65/222 (29.28%), Postives = 120/222 (54.05%), Query Frame = 0
Query: 36 ARLDKWLENSRADLEGLE------MRHEK----ALAEMVAERATLLARQAELKGKTDE--GTRLSEQRQETLKAIEAEIARLKEKEADLPQELQLARAREKELQEILASKRAALSELS-SRQGDYINDLTRGVVMYKH-LGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATI 243
+LD++L+ +R E + H K +++ + E+A LA++ + +T E RL ++QE ++A+ A I++LK K+ +P++ + + +L S++ A SE++ + Q Y N L + Y++ LGL ER +D ++ IFT ++ P REY F + +DE D Y+VE C P + V L+ +LN+ D + F+ +R+ F+A +
Sbjct: 7 VKLDEYLQKARKHFEQWNEEQLRFLNHIKESHFTMSKDLQEKAVSLAQREKQLLETAEKISERLDSEKQE-IEAVMAGISQLKSKQEMIPEKKTKLKEELENQSSLLKSRQRAFSEINETSQQKYAN-LRNAIRTYENCLGLRLERTEDGRIAFIFTHINQQVPEREYSFCIFVDENDHYQVESCTPPVKDITV--LLEKLNRDEDLSRFILSIRKRFQAMV 224
BLAST of EWM28675.1 vs. NCBI_GenBank
Match: gi|919081729|ref|XP_013421913.1| (PREDICTED: kinetochore protein Spc25-like [Lingula anatina]) HSP 1 Score: 86.6557 bits (213), Expect = 8.371e-17 Identity = 55/207 (26.57%), Postives = 106/207 (51.21%), Query Frame = 0
Query: 38 LDKWLENSRADLEGLEMRHEKALAEMVAERATLLARQAELKGKTDEGTRLSEQRQETLKAIEAEIARLKEKEADLPQELQLARAREKELQEILASKRAALSELSSRQGDYINDLTRGVVMYK-HLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATI 243
L++W + A + + RHE+ + + + L +LKG+ ++ E+R +K + +I + + L +E +LA K +QE + ++ ++ +++L + +K LG+ F++ N+L+++FT +D + SR +FFSV I+ Y V +C+P ++ + LV +LN N+F FV MR FKA +
Sbjct: 34 LEEWSGDMTAAMAEQKKRHEEVMRKGKEDMEALKTTLEQLKGQAKTNQKVMEERIGKMKQLREDIGTVTTETDSLLREKELAMEEMKSMQEYIQKQKELITAQEQATHQRLDELQKASEWFKDRLGIQFKKTSGNRLQMVFTCIDPKDTSRPFFFSVKIEADGTYTVSDCEPEIEN--LPELVEKLNATNNFRSFVITMRTLFKAKV 238 The following BLAST results are available for this feature:
BLAST of EWM28675.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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