EWM28683.1, cds1870 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|585111106|gb|EWM28683.1| (dimethyladenosine transferase [Nannochloropsis gaditana]) HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
Query: 1 MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFSS 288
MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFSS
Sbjct: 1 MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFSS 288
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|298706896|emb|CBJ25860.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 400.208 bits (1027), Expect = 9.098e-138 Identity = 198/309 (64.08%), Postives = 235/309 (76.05%), Query Frame = 0
Query: 5 GIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMAL------------------RGKES-GEVVAGIEIEGGKTGVPIAGG-------VKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287
GIVD+AA++ TDVV+E+GPGTGNLTV+LL+RAK+V+AVE D RMVREV+KRVEGT+ +SL +IQGDVLKV LPFFDV VAN+PY ISSPLLFKLLAHRPMFRCAVIM QEEFAQRLTA+P D++CRLSVNTQLLAKVDQL KV RNNFRPPPKVDSRVVRIELRNPPPPVNF EWDG++R++FNRKHKTL A LTTK+ L +L N TY A+ + K + G VA ++ K G G VK +VE V+ + EG+RAA MD+DD LALL+ FN++GVHF+
Sbjct: 2 GIVDRAAVKRTDVVLEIGPGTGNLTVRLLERAKRVIAVELDTRMVREVMKRVEGTEWEKSLQIIQGDVLKVPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTARPNTDMWCRLSVNTQLLAKVDQLFKVNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRVIFNRKHKTLRATLTTKATLKLLTSNVNTYRAISRAAAGGNGPVGGGHAKSKAKPARGAAVAVDAMDEEKEGEGDVGDGRATEAEVKEMVESVLERESLEGRRAASMDIDDLLALLSAFNEKGVHFA 310
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|301110310|ref|XP_002904235.1| (dimethyladenosine transferase [Phytophthora infestans T30-4] >gi|262096361|gb|EEY54413.1| dimethyladenosine transferase [Phytophthora infestans T30-4]) HSP 1 Score: 392.504 bits (1007), Expect = 9.410e-135 Identity = 187/287 (65.16%), Postives = 225/287 (78.40%), Query Frame = 0
Query: 1 MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287
M+V IV KAAIR TDV +EVGPGTGNLTVKLL++AK+VVAVE+D RMV E+ KR++ T+H L +I GDV++V LPFFDVCVAN+PYQISSP +FKLLAHRPMFRCAV+M QEEFA+RL+AKPGD+LYCRLSVNTQLLAKVDQL+KVGRNNFRPPPKV+SRVVRIE RNPPPPVNF EWDG+++++FNRK+KTLH+ TKSVL +LE+N+KTY +L + +A +K VEEV++ F KR AKMD DDFL LL FN +HFS
Sbjct: 42 MIVTQIVAKAAIRGTDVCLEVGPGTGNLTVKLLEQAKRVVAVEFDPRMVAELQKRIQHTEHINHLQIIHGDVMRVQLPFFDVCVANLPYQISSPFVFKLLAHRPMFRCAVVMFQEEFAKRLSAKPGDELYCRLSVNTQLLAKVDQLLKVGRNNFRPPPKVESRVVRIEPRNPPPPVNFTEWDGMIKIIFNRKNKTLHSCFVTKSVLKILEENYKTYCSLNNELPESDIA----------------MKKKVEEVLSFEDFGSKRGAKMDQDDFLLLLERFNANKIHFS 312
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|675200683|ref|XP_008909226.1| (dimethyladenosine transferase [Phytophthora parasitica INRA-310] >gi|566019055|gb|ETI41966.1| dimethyladenosine transferase [Phytophthora parasitica P1569] >gi|567956368|gb|ETK81993.1| dimethyladenosine transferase [Phytophthora parasitica] >gi|567985050|gb|ETL35400.1| dimethyladenosine transferase [Phytophthora parasitica] >gi|568014441|gb|ETL88618.1| dimethyladenosine transferase [Phytophthora parasitica] >gi|568044688|gb|ETM41882.1| dimethyladenosine transferase [Phytophthora parasitica] >gi|568090875|gb|ETN05704.1| dimethyladenosine transferase [Phytophthora parasitica INRA-310] >gi|570322638|gb|ETO70586.1| dimethyladenosine transferase [Phytophthora parasitica P1976] >gi|570946453|gb|ETP11710.1| dimethyladenosine transferase [Phytophthora parasitica CJ01A1] >gi|570978681|gb|ETP39823.1| dimethyladenosine transferase [Phytophthora parasitica P10297]) HSP 1 Score: 392.119 bits (1006), Expect = 1.644e-134 Identity = 189/287 (65.85%), Postives = 225/287 (78.40%), Query Frame = 0
Query: 1 MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287
M+V IV KAAIR TDV +EVGPGTGNLTVKLL++AK+VVAVE+D RMV E+ KR++ T+H L +I GDV++V LPFFDVCVAN+PYQISSP +FKLLAHRPMFRCAV+M QEEFA+RL+AKPGD+LYCRLSVNTQLLAKVDQL+KVGRNNFRPPPKV+SRVVRIE RNPPPPVNF EWDG+++++FNRK+KTLH+ TKSVL +LE+N+KTY +L E+ G +K VEEV+A F KR AKMD DDFL LL FN +HFS
Sbjct: 42 MIVTQIVAKAAIRGTDVCLEVGPGTGNLTVKLLEQAKRVVAVEFDPRMVAELQKRIQHTEHINHLQIIHGDVMRVQLPFFDVCVANLPYQISSPFVFKLLAHRPMFRCAVVMFQEEFAKRLSAKPGDELYCRLSVNTQLLAKVDQLLKVGRNNFRPPPKVESRVVRIEPRNPPPPVNFTEWDGMIKIIFNRKNKTLHSCFVTKSVLKILEENYKTYCSLNN----------ELPEGDI------DMKKKVEEVLAFEGFGEKRGAKMDQDDFLLLLERFNANKIHFS 312
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|695456506|ref|XP_009536969.1| (putative dimethyladenosine transferase [Phytophthora sojae] >gi|348667578|gb|EGZ07403.1| putative dimethyladenosine transferase [Phytophthora sojae]) HSP 1 Score: 392.119 bits (1006), Expect = 1.644e-134 Identity = 189/287 (65.85%), Postives = 225/287 (78.40%), Query Frame = 0
Query: 1 MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287
M+V IV KAAIR TDV +EVGPGTGNLTVKLL++AK+VVAVE+D RMV E+ KR++ T+H L +I GDV++V LPFFDVCVAN+PYQISSP +FKLLAHRPMFRCAV+M QEEFA+RL+AKPGD+LYCRLSVNTQLLAKVDQL+KVGRNNFRPPPKV+SRVVRIE RNPPPPVNF EWDG+++++FNRK+KTLH+ TKSVL +LE+N+KTY +L E+ G +K VEEV+A F KR AKMD DDFL LL FN +HFS
Sbjct: 42 MIVTQIVAKAAIRGTDVCLEVGPGTGNLTVKLLEQAKRVVAVEFDPRMVAELQKRIQHTEHINHLQIIHGDVMRVQLPFFDVCVANLPYQISSPFVFKLLAHRPMFRCAVVMFQEEFAKRLSAKPGDELYCRLSVNTQLLAKVDQLLKVGRNNFRPPPKVESRVVRIEPRNPPPPVNFTEWDGMIKIIFNRKNKTLHSCFVTKSVLKILEENYKTYCSLNN----------ELPEGDI------DMKKKVEEVLAFEKFGEKRGAKMDQDDFLLLLERFNANKIHFS 312
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|673052017|ref|XP_008879969.1| (dimethyladenosine transferase [Aphanomyces invadans] >gi|574464292|gb|ETV91341.1| dimethyladenosine transferase [Aphanomyces invadans]) HSP 1 Score: 389.808 bits (1000), Expect = 1.268e-133 Identity = 185/282 (65.60%), Postives = 223/282 (79.08%), Query Frame = 0
Query: 6 IVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287
IV KAAIRSTD+ +EVGPGTGN+T+KLL++AKKV+AVE+D RM+ EV KRV+ T+HA+ LH+I GD +KV LPFFDVCVAN+PYQISSP +FKLL+HRPMFRCAV+M QEEFA+RL+A+PGD+LYCRLSVNTQLLAKVDQL+KVGR+NFRPPPKV+SRVVRIE +NPPPPVNF EWDG+V+++FNRK+KTL A TK VL VLE N+KTY +L V A +K LVE+V+ F +R +KMDLDDFL LL FN R VHFS
Sbjct: 51 IVAKAAIRSTDICLEVGPGTGNITMKLLEQAKKVIAVEFDPRMIAEVQKRVQNTEHAQRLHIIHGDAIKVQLPFFDVCVANLPYQISSPFVFKLLSHRPMFRCAVVMFQEEFAKRLSARPGDELYCRLSVNTQLLAKVDQLLKVGRSNFRPPPKVESRVVRIEPKNPPPPVNFTEWDGMVKIIFNRKNKTLRASFCTKPVLKVLEDNYKTYCSLHN----------------LAVDPAFDIKQLVEDVLVETKFSDQRGSKMDLDDFLVLLNAFNSRQVHFS 316
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|1173944512|gb|OQR93241.1| (dimethyladenosine transferase [Achlya hypogyna]) HSP 1 Score: 390.578 bits (1002), Expect = 3.325e-130 Identity = 184/282 (65.25%), Postives = 219/282 (77.66%), Query Frame = 0
Query: 1 MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQR 282
M+ IV KAAIR TD+ +EVGPGTGN+TVKLL++AKKV+AVE+D RM+ EV KRV+ T+HA LH+I GD +KV LPFFDVCVAN+PYQISSP +FKLL+HRPMFRCAV+M QEEFA RL+A+PGDDLYCRLSVNTQLLAKVDQL+KVGRNNFRPPPKV+SRVVRIE +NPPPPVNF EWDG+V+++FNRK+KTLH+ TTKSVL +LE N++TY +L A +K+LVE + F KR AKMDLDDFL LL FN R
Sbjct: 46 MIASEIVSKAAIRGTDICLEVGPGTGNITVKLLEQAKKVIAVEFDPRMIAEVQKRVQNTEHANHLHIIHGDAIKVQLPFFDVCVANLPYQISSPFVFKLLSHRPMFRCAVVMFQEEFAMRLSARPGDDLYCRLSVNTQLLAKVDQLLKVGRNNFRPPPKVESRVVRIEPKNPPPPVNFTEWDGMVKIIFNRKNKTLHSCFTTKSVLKILEDNYRTYCSLNNLMPDP----------------AFDIKSLVEATLTETEFSDKRGAKMDLDDFLILLNAFNSR 311
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|698806370|ref|XP_009836214.1| (dimethyladenosine transferase [Aphanomyces astaci] >gi|574108602|gb|ETV74108.1| dimethyladenosine transferase [Aphanomyces astaci]) HSP 1 Score: 380.948 bits (977), Expect = 4.532e-130 Identity = 181/282 (64.18%), Postives = 220/282 (78.01%), Query Frame = 0
Query: 6 IVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287
IV KAAIRSTD+ +EVGPGTGN+T+KLL++AKKV+AVE+D RM+ EV KRV+ T+ + LH+I GD +KV LPFFDVCVAN+PYQISSP +FKLL+HRPMFRCAV+M QEEFA+RL+A+PGD+LYCRLSVNTQLLAKVDQL+KVGR+NFRPPPKV+SRVVRIE +NPPPPVNF EWDG+V+++FNRK+KTL A TK VL VLE N+KT+ +L V +K LVEEV+ + +R +KMDLDDFL LL FN R VHFS
Sbjct: 51 IVAKAAIRSTDICLEVGPGTGNITMKLLEQAKKVIAVEFDPRMIAEVQKRVQNTEFVQRLHIIHGDAIKVQLPFFDVCVANLPYQISSPFVFKLLSHRPMFRCAVVMFQEEFAKRLSARPGDELYCRLSVNTQLLAKVDQLIKVGRSNFRPPPKVESRVVRIEPKNPPPPVNFTEWDGMVKIIFNRKNKTLRASFCTKPVLKVLEDNYKTFCSL----------------NNVAVDPTFDIKLLVEEVLVQTNYSDQRGSKMDLDDFLVLLNAFNSRHVHFS 316
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|635371262|emb|CCI40662.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 377.481 bits (968), Expect = 1.003e-128 Identity = 177/287 (61.67%), Postives = 224/287 (78.05%), Query Frame = 0
Query: 1 MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287
M+ IV KAA+RSTD+ +EVGPGTGNLT+K+L++AKKV+AVEYD+RM+ E+ KRV+ T+HA+ L VI GDV++V LPFFDVC+AN+PYQISSP +FKLLAHRPMFRCAV+M QEEFA+RL+AKPGD LYCRLSVNTQLLAKVDQL+KVG+NNFRPPPKV+SRVVRIE RNPPPPVNF EWDG+++++FNRK+KTL A TK VL +LE+N+KT+ +L E ++ I ++A++ + F +RA+KMD DD L LL FN VHF+
Sbjct: 42 MIAAQIVSKAALRSTDICLEVGPGTGNLTMKILNQAKKVIAVEYDLRMIAEIQKRVQNTEHAKHLQVIHGDVIRVQLPFFDVCIANLPYQISSPFVFKLLAHRPMFRCAVVMFQEEFAKRLSAKPGDQLYCRLSVNTQLLAKVDQLIKVGKNNFRPPPKVESRVVRIEPRNPPPPVNFVEWDGMIKIIFNRKNKTLRACFLTKPVLKMLEENYKTFCSLHE------------ELPESDFDIKKKIEAVLSD-----EFSDRRASKMDQDDLLRLLERFNSSKVHFT 311
BLAST of EWM28683.1 vs. NCBI_GenBank
Match: gi|325179921|emb|CCA14323.1| (dimethyladenosine transferase putative [Albugo laibachii Nc14]) HSP 1 Score: 376.326 bits (965), Expect = 2.302e-128 Identity = 178/287 (62.02%), Postives = 223/287 (77.70%), Query Frame = 0
Query: 1 MVVQGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAKPGDDLYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287
M+ IV KAA+RSTDV +EVGPGTGNLT+K+L++AKKV+AVEYD+RM+ E+ KRV+ T+HA+ L VI GDV++V LPFFDVC+AN+PYQISSP +FKLLAHRPMFRCAV+M QEEFA+RL+AKPGD LYCRLSVNTQLLAKVDQL+KVG+NNFRPPPKV+SRVVRIE RNPPPPVNF EWDG+++++FNRK+KTL A TK VL +LE N+KT+ +L E ++ I ++A++ + F KRA+KMD DD L LL FN +HF+
Sbjct: 42 MIAAQIVSKAALRSTDVCLEVGPGTGNLTMKILNQAKKVIAVEYDLRMIAEIQKRVQNTEHAKHLQVIHGDVIRVQLPFFDVCIANLPYQISSPFVFKLLAHRPMFRCAVVMFQEEFAKRLSAKPGDQLYCRLSVNTQLLAKVDQLIKVGKNNFRPPPKVESRVVRIEPRNPPPPVNFVEWDGMIKILFNRKNKTLRACFLTKPVLKMLEDNYKTFCSLHE------------ELPESDFDIKKKIEAVLSD-----DFSDKRASKMDQDDLLRLLERFNSSKIHFT 311 The following BLAST results are available for this feature:
BLAST of EWM28683.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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