EWM28755.1, cds1869 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|585111178|gb|EWM28755.1| (transcriptional activator hap2 [Nannochloropsis gaditana]) HSP 1 Score: 648.277 bits (1671), Expect = 0.000e+0 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
Query: 1 MDGAETGSVGDSDSGGGRKKIVRPCSSAETSLSMDVTATSYQGTNFNHMLSHGAPASAMVETHDGEGSLCPFPFQPPPHQQHNLQYQQPQEHQMQQTYYGQMNDDGNNFYDHSPQMEGFEPLGAPQEAAGSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTSTMGAVHVSNEIAALPHVKCLTRRARALACTGSMSDDCSLLVHSNAYRPNVIRCSPVRAAEGVYKTHVNEGKERAAIVTCCAPCTPPVRVNVWQGSIS 308
MDGAETGSVGDSDSGGGRKKIVRPCSSAETSLSMDVTATSYQGTNFNHMLSHGAPASAMVETHDGEGSLCPFPFQPPPHQQHNLQYQQPQEHQMQQTYYGQMNDDGNNFYDHSPQMEGFEPLGAPQEAAGSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTSTMGAVHVSNEIAALPHVKCLTRRARALACTGSMSDDCSLLVHSNAYRPNVIRCSPVRAAEGVYKTHVNEGKERAAIVTCCAPCTPPVRVNVWQGSIS
Sbjct: 1 MDGAETGSVGDSDSGGGRKKIVRPCSSAETSLSMDVTATSYQGTNFNHMLSHGAPASAMVETHDGEGSLCPFPFQPPPHQQHNLQYQQPQEHQMQQTYYGQMNDDGNNFYDHSPQMEGFEPLGAPQEAAGSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTSTMGAVHVSNEIAALPHVKCLTRRARALACTGSMSDDCSLLVHSNAYRPNVIRCSPVRAAEGVYKTHVNEGKERAAIVTCCAPCTPPVRVNVWQGSIS 308
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|1024091446|gb|KZV83013.1| (hypothetical protein EXIGLDRAFT_626308 [Exidia glandulosa HHB12029]) HSP 1 Score: 104.375 bits (259), Expect = 2.202e-23 Identity = 46/85 (54.12%), Postives = 65/85 (76.47%), Query Frame = 0
Query: 130 GSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTSTMG 214
G +L +P++VN KQY RI+KRR ARARLE +++ +RKP+LH+SRH HA++RPRGPGGRFLT EER A + ++ G+++ G
Sbjct: 78 GEELDEEPLYVNAKQYNRILKRRAARARLEELHRLSRQRKPYLHESRHKHAMRRPRGPGGRFLTAEERAALENAKSAASGSTSPG 162
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|1024098049|gb|KZV89397.1| (hypothetical protein EXIGLDRAFT_618285 [Exidia glandulosa HHB12029]) HSP 1 Score: 103.605 bits (257), Expect = 4.022e-23 Identity = 46/85 (54.12%), Postives = 65/85 (76.47%), Query Frame = 0
Query: 130 GSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTSTMG 214
G +L +P++VN KQY RI+KRR ARARLE +++ +RKP+LH+SRH HA++RPRGPGGRFLT EER A + ++ G+++ G
Sbjct: 77 GEELDEEPLYVNAKQYNRILKRRAARARLEELHRLSRQRKPYLHESRHKHAMRRPRGPGGRFLTAEERAALENAKSAASGSTSPG 161
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|576985476|gb|EUC58212.1| (CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B, partial [Rhizoctonia solani AG-3 Rhs1AP]) HSP 1 Score: 101.679 bits (252), Expect = 3.155e-22 Identity = 57/135 (42.22%), Postives = 79/135 (58.52%), Query Frame = 0
Query: 83 NLQYQQPQEHQMQQTYYGQMNDDGNNFYDH---SPQMEG---FEPLGAPQEAAGSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTS 211
+L+Y QP ++ QQ Y +F +P + P A Q+ L +P++VN KQY RI+KRR ARARLE +++ ERKP+LH+SRH HA++RPRGPGGRFLT +E A D + GT+
Sbjct: 68 DLEYSQPDQYS-QQEYVPPPPPPATSFAPSETLAPAADSGSSISPTTAQQDEDTEALDEEPLYVNAKQYHRILKRRGARARLEEVHRLSKERKPYLHESRHKHAMRRPRGPGGRFLTADEIAALDAKGGAQPGTN 201
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|660966880|gb|KEP51272.1| (CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [Rhizoctonia solani 123E]) HSP 1 Score: 100.138 bits (248), Expect = 1.337e-21 Identity = 57/135 (42.22%), Postives = 77/135 (57.04%), Query Frame = 0
Query: 83 NLQYQQPQEHQMQQTYYGQMNDDGNNFYDH---SPQMEG---FEPLGAPQEAAGSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTS 211
+L+Y QP Q Q Y +F +P + P A Q+ L +P++VN KQY RI+KRR ARARLE +++ ERKP+LH+SRH HA++RPRGPGGRFLT +E A D + GT+
Sbjct: 77 DLEYSQPD--QYSQEYVPPPPPPATSFAPSETLAPAADSGSSISPTTAQQDEDTEALDEEPLYVNAKQYHRILKRRGARARLEEVHRLSKERKPYLHESRHKHAMRRPRGPGGRFLTADEIAALDAKGGAQPGTN 209
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|1021059614|emb|SAM04399.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 99.7525 bits (247), Expect = 3.592e-21 Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 0
Query: 125 PQEAAGSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQL 207
P A GSD +P++VN KQY RI+KRR ARARLE ++A RKP+LH+SRH HA++RPRGPGGRFLT +E IA E Q +L
Sbjct: 112 PPAATGSD---EPLYVNAKQYHRILKRRAARARLEEMHRVAKARKPYLHESRHRHAMRRPRGPGGRFLTAQE-IAELESQGKL 190
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|443923538|gb|ELU42758.1| (CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B domain-containing protein [Rhizoctonia solani AG-1 IA]) HSP 1 Score: 97.8265 bits (242), Expect = 3.802e-21 Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = 0
Query: 121 PLGAPQEAAGSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTSTMGAVHVSNEIA 223
P A Q+ L +P++VN KQY RI+KRR ARARLE +++ ERKP+LH+SRH HA++RPRGPGGRFLT EE A + + GT+ +V+ +A
Sbjct: 20 PTAAEQDDEHEVLDEEPLYVNAKQYHRILKRRSARARLEEVHRLSKERKPYLHESRHKHAMRRPRGPGGRFLTAEEIAALESKGGAQPGTNPAPRANVTPHLA 122
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|598049057|ref|XP_007353901.1| (hypothetical protein AURDEDRAFT_32547, partial [Auricularia subglabra TFB-10046 SS5] >gi|393230359|gb|EJD37966.1| hypothetical protein AURDEDRAFT_32547, partial [Auricularia subglabra TFB-10046 SS5]) HSP 1 Score: 94.3597 bits (233), Expect = 5.525e-21 Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0
Query: 133 LGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQ 204
L +P++VN KQY RI+KRR ARARLE +++ +RKP+LH+SRH HA++RPRGPGGRFLT EER A + Q
Sbjct: 1 LDDEPLYVNAKQYNRIIKRRLARARLEELHRLSRQRKPYLHESRHKHAMRRPRGPGGRFLTAEERAALERSQ 72
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|751832886|emb|CEL61321.1| (Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1 [Rhizoctonia solani AG-1 IB]) HSP 1 Score: 98.2117 bits (243), Expect = 8.027e-21 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0
Query: 121 PLGAPQEAAGSDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTS 211
P A QE L +P++VN KQY RI+KRR ARARLE +++ ERKP+LH+SRH HA++RPRGPGGRFLT +E A + + GT+
Sbjct: 125 PTAAEQEDDPEALDEEPLYVNAKQYHRILKRRTARARLEEVHRLSKERKPYLHESRHKHAMRRPRGPGGRFLTADEIAALESKGGAQPGTN 215
BLAST of EWM28755.1 vs. NCBI_GenBank
Match: gi|511002132|gb|EPB83577.1| (hypothetical protein HMPREF1544_09679 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 97.4413 bits (241), Expect = 2.083e-20 Identity = 54/121 (44.63%), Postives = 74/121 (61.16%), Query Frame = 0
Query: 114 PQMEGFEPLGA-------PQEAAGSDLGP--QPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTSTMGAVHVSNEIAAL 225
PQ G+ P+ A PQ A + P +P++VN KQY RI+KRR ARA+LE K++ RKP+LH+SRH HA++RPRGPGGRFLT +E + E ++ G S+ A + AL
Sbjct: 66 PQTLGYRPMDAATAASAVPQPAQNAAEQPSEEPLYVNAKQYHRILKRRAARAKLEELNKLSKARKPYLHESRHKHAMRRPRGPGGRFLTAKE-VEELERTGKMPGQSSHDAAKSETKTEAL 185 The following BLAST results are available for this feature:
BLAST of EWM28755.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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